KEGG   Oryzias latipes (Japanese medaka): 101175372
Entry
101175372         CDS       T02443                                 
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03013  Nucleocytoplasmic transport
ola03015  mRNA surveillance pathway
ola03040  Spliceosome
ola05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101175372
  09122 Translation
   03013 Nucleocytoplasmic transport
    101175372
   03015 mRNA surveillance pathway
    101175372
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    101175372
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ola03019]
    101175372
   03041 Spliceosome [BR:ola03041]
    101175372
Messenger RNA biogenesis [BR:ola03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     101175372
    TREX complex
     101175372
Spliceosome [BR:ola03041]
 Complex C
  Other components
   EJC/TREX
    101175372
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101175372
SSDB
Motif
Pfam: RRM_1 FoP_duplication FYTT Btz
Other DBs
NCBI-GeneID: 101175372
NCBI-ProteinID: XP_004065594
LinkDB
Position
1:4337245..4340664
AA seq 251 aa
MADKMSMSLDDIIKMNKREGRGGGGSSGRERGSGRAGGSSRPPGRGRQSNFSRERTNRPA
PYTRPRELPDKWQHDMFEEHSRGPRAQSPEADDSFGGSSSKLLISNLDFGVSDSDIKDLF
EEFGTLKKASIHYDRSGRSKGVAEVHFVNKADALKAMKHYNGVPLDGHPMKIQQVASDVG
TQSSNKGFDRSRLGQPRFERRPRGGSSGFRGGGSSGFRGRGRGGGNKPPVTAEELDAQLD
AYNAQCQMDTN
NT seq 756 nt   +upstreamnt  +downstreamnt
atggccgataagatgagcatgtctctggacgacattatcaaaatgaataaaagagaaggc
cgcggaggaggaggatcgtccggacgggagaggggatccggtcgagccggtggatcgtcg
cggccgccgggtcgcggtcgacaaagtaacttcagccgcgagaggaccaacagacccgca
ccgtacaccaggccgagggagttgccggacaagtggcagcacgacatgtttgaggagcat
tctcgtgggccgagggcccagagtccagaggcagacgacagctttgggggcagcagcagc
aagctgctcatctctaacctcgattttggagtttctgattcagacataaaggacctcttt
gaagagtttggaactttaaagaaggcatcgatacactacgatcgctctggtcgtagtaaa
ggagtcgctgaagttcactttgtaaataaagcagatgccctcaaagcgatgaagcactac
aacggcgtcccgctcgacggtcaccccatgaaaatccagcaggtggcctcagacgtcggc
acgcagagctcaaacaaaggcttcgaccgaagccggctgggccagccccgctttgaacgg
cggccaagggggggcagctctggtttcagaggggggggcagctcaggcttcagaggccgg
ggcagaggcggtggaaacaaacccccggtgacggcagaggagctggacgctcagctggat
gcttacaacgctcagtgccagatggacaccaattaa

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