Oryzias latipes (Japanese medaka): 101175415
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Entry
101175415 CDS
T02443
Symbol
sgce
Name
(RefSeq) epsilon-sarcoglycan isoform X4
KO
K27061
epsilon-sarcoglycan
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101175415 (sgce)
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Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
Het-C
Motif
Other DBs
NCBI-GeneID:
101175415
NCBI-ProteinID:
XP_004073875
UniProt:
H2LHP1
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Position
11:complement(10380794..10397683)
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AA seq
438 aa
AA seq
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MTAAAVAVWLGTVVTILSRSHGDRNVYPSAGVLFVHVLEREHFKGEFPPYPKSGDASNDP
ITFNTNLMGYPDRPGWLRYIQRTPYGDGVLYGSPTPEHVGRPTVIEITAYNRRTFETARH
NLVINIMATEEFPLPYQAEFYIKNMNVEEMLVSEVLGDFLGAVKNVWQPERLNAINITSA
LDRGGRVPLPINNLKEGVYVMVGADVPFSSCLREVESPHNQLRCSQEMEPAISCDKKFRA
QFHIDWCKISLVDINKVVPVYITRPDPGTGILPDFGEYNPPSESLKSRDYFSDFLVTMAI
PSAVALVLFFILGHIMCCRREGVEKRNMQTSDIQLVHHSAIQKSTKELRSMSKNREISWP
LSTLPVFNPVSGEVVPPIHPDNYETTSMPLMQTQSNLQNQITIPQPRPSGDNYVMSTFRR
LEVNGIPEERKVAEALNL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcggctgtcgcggtttggctcggaacggtggtaaccatcttatcgaggtcc
catggagaccgaaatgtgtacccgtccgctggagtgctgtttgtccatgttctggagcgg
gagcactttaaaggagagtttccaccataccccaaatcaggcgacgctagcaatgacccc
atcactttcaacaccaacctgatggggtacccggacaggccggggtggctgcgctacatc
caaagaactccctacggggatggcgttctctacggttctcccaccccagagcacgttggc
cggcctactgtcatagagattacggcttataacaggcgcacgttcgagaccgcacggcac
aacttggtcataaacatcatggcaacagaagagttcccgctgccttaccaagctgagttc
tacatcaagaacatgaacgtggaggagatgctggtcagcgaggtgcttggcgacttcctg
ggcgcagtgaagaacgtatggcagcctgagcggctcaacgccatcaacatcacttcagcc
ctggaccgtggcggccgcgtgccccttcccatcaacaacttgaaggaaggcgtttacgtg
atggttggcgccgatgttcccttctcgtcgtgcctgagggaggtggaaagcccacataac
cagctgcgctgcagtcaggagatggaacccgccatcagctgcgataagaaattcagagct
cagtttcacatcgactggtgtaaaatctccctggttgacatcaacaaagtagtcccagtt
tacattacccgccctgaccccggtacagggatcctgcctgactttggggagtacaacccg
ccatccgagtccctgaaaagcagggactacttttctgacttccttgtcaccatggcgatt
ccctcagctgtggctttagtcctcttctttatccttggccacattatgtgctgcaggcgg
gaaggggtggaaaaaagaaacatgcaaacatcagacatccagttggttcatcacagtgcc
atccagaagtccacaaaggagctgcggagcatgtccaagaaccgtgagatctcctggcct
ctctccaccctgcccgtcttcaacccagtcagcggcgaggtggtgccacccatccacccg
gacaactacgagaccaccagcatgcccttgatgcagacgcagtcgaacttgcaaaaccag
ataaccataccacagccacgaccatcaggagataactatgtcatgtccacctttcggcgg
ctggaggtaaatggtattcctgaggagaggaaggtggctgaagcactaaatctatga
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