Oryzias latipes (Japanese medaka): 101175421
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Entry
101175421 CDS
T02443
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101175421 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101175421 (trip12)
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101175421 (trip12)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
HECT type E3
101175421 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
101175421
NCBI-ProteinID:
XP_023817805
UniProt:
H2M899
LinkDB
All DBs
Position
13:22662533..22695610
Genome browser
AA seq
2058 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTVAGRLQTEQTKHKTNSPPESRRHNSKAPKAT
ASSATGQSRGHSSRRSGLTLSVASFVLQDDPETAGTSEQERSGHFSKSEGTRGLKRSEAP
DQISVLGPTPSKKSKPIHQPRDNTSETKKGPAKSKKRPVASDSSASSGRGQSKKSVVAGG
SPSQKRKKSDTLPGLSSTAASLANCSEGRTAKPTKLASKSAASAKAGCSNVTDSSSSASS
SSSSSITGTNSTATQGARVKQGKDQSKARRSRSASSPSPRRSTRDKEQAKTTSSSKFEWA
ARFNPKVNLPKPKLSLPGSSKTETSKPGPSGLQAKLANLRRSTKKRSESPPAELPSFRRS
TRQKTTGSCASTSRRGSGLGKRGAADSRRQEKMADSDNNQDGANSSAARTDEASQGASAS
SSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASS
KAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFE
IMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKA
ILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDK
KSVESTCLCFARLVDNFQHEENLLQEVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMFS
LMCSNCPSLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVPRSPQELYELTSLICELMP
CLPREGIFAVDVMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISL
STLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLSNPNTGSHQEVRREDARAQLMKEDPE
LAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLRDVLRNHAVSSHIAS
MLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLAESESFLVTSPPKACP
SGTASLCTTTISTASTTATNNATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRG
PRRPKYSPPRDDDKVDNQAKSPTSTQSPKSSFLASLNPKSWGKLGTQTNNANSEPSRTAG
VSGLSRAPPKDSISNNRDKIKAWIKEQASKFVERYFNSENVDGSNPALNVLQRLCTATKQ
LSLQVDGGLECLAEISSIVSESDVSSFEIQHSGLVKQLLVYLSSNTDRDLLSRDIRLKRF
LHVFAGCPAPGIEPVGQLNPTETAPFLGLVYKMNSCLSQMEQFPVKVHDFPSGNGNGSRG
SQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREED
EDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEEER
ESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGGKDAVGGKRGRAQTAPTKTSPRNAKKQ
DELWHDGVCPTVINPLDTYLSSEPPETITFDDPSLDVILLLRVLHAISRYWFYLHESAAC
KEILTTNEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKSCPFFFPFDTRQMLFYVT
AFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINREELLKQAESVIQDLGSSRA
MLEIQYENEVGTGLGPTQEFYALVSQELQRADLGLWRGEEVTLTNPKGNQEGTKYMFSSR
GLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHETSVS
SHDLVNIDPGVAKSIQHLEDIIRQKKRLEQDRSQTRETLQQALESLNMNGCSVEDLGLDF
TLPGFPNIELKKGGKDVAVTIYNLEEYLRLVVYWTLNEGVSRQFESFREGFESVFPLHHL
QYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAIRFLFEVLSSFDAEQQRLF
LQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIM
REKLLIAAREGQQSFHLS
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccacacagtagctggaaggttgcagacagagcagacaaaa
cacaaaacaaattccccacctgaaagtagaagacacaattctaaagctcccaaagccaca
gccagctccgctaccggccagtccagagggcacagctcaagaagaagcggccttactctg
tccgtggcttcatttgttttgcaagacgaccctgagactgcaggaacgtctgaacaagag
cgatcgggccatttttcaaaaagtgagggcacccgcggactcaaacgaagcgaagctccc
gaccaaatcagcgtccttggaccgaccccttccaagaagtccaaacccatccaccaaccc
cgagacaatacctcagagaccaagaaaggcccagctaagtccaagaagagacctgtggcc
tcagactcctctgcgtcatcaggtcgaggtcagagcaaaaagagtgtggttgctgggggc
tccccaagtcagaaaaggaaaaaatcagacactctccccggtctaagtagtaccgctgct
tccctcgctaattgtagtgagggcagaactgcaaaacccaccaagctggcgtctaaatca
gccgcctcagccaaagctgggtgtagcaacgtgacagactcctcctcttctgcttcatcc
tcttcctcttcctccataacaggcaccaatagcactgccacacagggtgcccgagtcaaa
cagggaaaagatcagagcaaagcgcgccgctctcgctcagcgtctagcccctccccgcgc
cgtagcacacgagacaaggaacaggccaaaaccaccagctcgtcaaaatttgagtgggca
gcccgctttaaccccaaagtcaacctgccaaaacccaaactgtctttacccggatcctcc
aaaactgagacctccaagcccggcccatcaggactgcaagctaaactagcaaacttgaga
agatccaccaagaagcgcagcgagtctcctccagcagagctccccagctttcggcggagc
acacggcagaagaccacgggctcctgtgccagcaccagtcggcggggttcaggcctgggc
aagcgcggggcagctgactctcgccgccaagagaaaatggccgactccgacaacaaccaa
gatggggccaactcatcagccgctcgtaccgatgaagcttcacaaggggcctcagcttcg
agttcagtagctggagcagtgggtatgacaacctctggagaaagtgagtctgatgattcg
gaaatgggaaggcttcaagctttgctggaggcccgaggtctccctcctcacctctttggg
cctttgggacctcgtatgtcacagctgttccataggaccataggcagtggagccagttcc
aaggctcagcagctgctgcagggccttcaggccactggcgacgagtctcagcagctccaa
gctgcgattgagatgtgccagctgttggtgatgggcaacgaggaaactctgggtggtttt
ccagtcaaaagtgtggtgccggctctgattacactcttacaaatggaacataactttgaa
attatgaaccatgcctcacgtgcactcacctacatgatggaggcgctcccccggtcgtcc
gcagtggtggttgatgcaattcctgtcttcctagagaagctccaggtgatccagttcatt
gacgttgcagagcaggctctgactgccttagagatgctgtcaaggcgacacagtaaagcc
attttgcaggccggtgggctggcagactgccttctctacctggagttcttcagtatcaac
gctcagaggaatgccttggccattgcagccaactgttgccagagcatcactccagacgag
ttccactttgttgcagattctctgcctctgttgactcagagactaacacaccaggacaaa
aagtcagttgaaagcacttgtctctgttttgccagactggtggacaactttcagcacgaa
gagaacctgctgcaggaagtggcatcaagagacttgttaacaaacattcagcagctgctg
gttgtgactcctcctgttctcagctcggggatgttcatcatggtggtgcgcatgttttca
ctaatgtgctctaactgtccaagcctggcggtccagcttatgaaacagaatatagcggaa
actctgcgttttcttctgtgcggtgcatcaaatggcagctgccaggagcagattgaactg
gtacccaggagtccccaggagctctatgaactgacgtccctcatatgtgagctgatgcct
tgcttgcctagagagggcatctttgccgttgatgtgatgctaaagaagggcagtgcccag
acgacagagggagctatctggcagtggagggatgaccgaggcctgtggcatccttacaat
cggattgacagccgcattattgagacagcccaccagaacggggaagatgagatcagcttg
tcgaccctgggccgagtgtacactattgacttcaactctatgcagcagataaatgaagat
actggaacagcgcggggcatccagaggaagcccaatcctctgtccaaccccaacacagga
agccaccaggaggtcagacgagaagatgcacgagcccagttgatgaaggaggacccagag
cttgcaaagtgcttcattaaaacgctgtttggggtcctgtatgaggtgtacagttcctca
gctggccctgctgtccgacacaagtgccttagagccatcctcaggatcatctactttgct
gatgcagagcttctgagggatgtgctgaggaaccatgctgtgtccagtcacattgcctcc
atgctctccagccaggacctgaagattgtagttggttctctgcagatggctgaaatcctc
atgcagaaactgccagatgtgttcagtgtctatttcagaagagaaggtgtgatgcaccag
gtgaaaaaccttgcagagtcggagagctttctggtcaccagtcctccaaaagcttgtcct
agtggtacagccagtctctgcaccacaaccatcagcactgcgtctacgacggctactaac
aatgcaactcctgacctgggctcccccagcttccagcacagtatggatgactctctggac
ctcagcccacaggggcggttaagtgatgtcctaaagagaaagagacttcccaaaagaggt
cccaggaggcccaaatactctccaccaagagatgatgacaaagtagacaatcaggctaaa
agccccaccagtactcagtcccccaagtcctcctttttggccagtttgaatcccaaaagc
tgggggaagcttggcacccaaaccaataacgccaactcagagccgtctcgcactgcgggg
gtgagcggcttgtcgagggcgcctcctaaggactctatttccaataacagagacaaaatc
aaagcctggatcaaagagcaagcgagtaaatttgtggagcgttacttcaactcagaaaac
gtggatggcagcaaccctgcattgaatgttctccagagactctgcacagccaccaaacag
ctcagtctgcaggtggacggtggtttggagtgcctagctgagatctccagcattgtgtcc
gagtcggacgtgtcttcttttgagattcagcacagcgggctggtgaagcagctcctggtc
tatctttcctcaaacacagaccgagacttgctgagtcgtgacatcaggctcaagcggttc
ctccacgtgtttgccggctgtccagctcctggaatagaacctgtaggtcaactgaacccg
accgagaccgcgcccttcctgggactggtgtacaagatgaacagctgtctgagccagatg
gagcagttcccagtgaaggtccacgacttccccagtggtaacggcaacggcagcaggggt
tcccaagcactgaagttcttcaacacgcatcagctcaagtgtcagctgcagagacacccg
gattgcactaatgtcaagcagtggaagggcggccctgtgaagatcgatcccctggctctg
gtgcaggccattgagagatatctagtggtcagaggttatggtcgaatcagggaagaggat
gaagacagtgatgacgacggttcagatgatgaaattgacgagtcactggcggcgcagttc
ctgaattcgggcagcgtccgacaccggttacagttctacattggtgaccacttgctaccg
tacaacatgactgtgtaccaggctgtacgtcagtacagtctccaggcggaagaagaaagg
gagtccacagacgacgaggccaaccctctgggccgtgctggaatctggaccaaaacacac
acgatatggtataagcctgtgagagaagacgaggatggagggaaagatgctgtgggtgga
aagaggggcagagctcagacggcccccaccaaaacctccccccgaaatgccaagaagcag
gatgagctgtggcacgatggcgtctgtcccaccgtcatcaatcctttagacacatacctc
agttcagagccaccggaaaccataacctttgacgacccctctctggatgtcatcctgctt
ctgagggttcttcacgccatcagtagatactggttctacctgcatgagagtgctgcttgt
aaagaaattttaactaccaatgagttcataaacagtaaattgactgccaaagccaaccgt
cagctgcaggacccgctggtaatcatgacggggaacatccccacctggctcattgagctt
ggaaagagctgccccttcttcttcccgtttgacacccggcagatgttattctacgtcacc
gcctttgatcgcgacagagccatgcagcggcttctggacacaaaccctgagatcaaccag
tcagactctcaggacagcagagtggctccacgccttgacagaaaaaagaggacgataaac
cgtgaggagctccttaaacaggcagagtctgtcattcaggacctcggcagctccagagcc
atgctggagattcagtacgagaatgaggttggaacgggcctgggccccacccaggagttc
tatgctctggtgtctcaggagcttcagagagctgatctaggtctttggagaggtgaagag
gtcactctgacaaaccctaaaggcaatcaggagggtaccaagtacatgttcagctccaga
ggattgtttgcagttccttttggcagaacaaccaaaccagcacacatagccaaaatcaaa
atgaagtttcgcttcttaggaaagttgatggccaaagccattatggacttcagactgctg
gatctgcctctggggctcccgttttataagtggatgctgcgacacgagacgtctgtgagc
tcacacgacctggttaacatcgaccccggtgtggccaagtccatccagcatttggaggac
atcattcggcagaagaagcggctggagcaggaccgatctcagactagagaaaccttacag
caagctctggaaagcctgaacatgaacggctgctctgtggaggacctgggcttggacttc
actcttcccggcttcccgaacatcgagctgaaaaaggggggcaaagatgtggcggtcaca
atctacaacctggaggagtacctcaggttggtggtttactggactttaaatgaaggagtg
tcgagacagtttgagtcctttcgggaaggattcgagtcggtctttcctttgcatcacctg
cagtatttctacccagaggagctcgaccagttgctgtgtggcagcaaatcagagacatgg
gatgtgaagacgctgatggagtgttgcagaccggatcatggatacacgcatgatagtcgt
gccattcggttcctgtttgaggtgttgagcagcttcgacgcggagcagcagagactcttc
ctgcagtttgtcacaggaagccccagactgcctgttggaggtttccgcagcctgaatccc
cctctgaccatcgtgagaaagacgttcgagtcgacggagaacccggacgacttcctcccc
tcagtcatgacctgtgtaaactacctaaagctgcctgactactccagcattgagatcatg
cgagagaaactgttgattgcagctcgcgagggccagcagtccttccacctttcctga
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integrated database retrieval system
