Oryzias latipes (Japanese medaka): 101175535
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Entry
101175535 CDS
T02443
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101175535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101175535
03012 Translation factors [BR:
ola03012
]
101175535
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101175535
Translation factors [BR:
ola03012
]
Eukaryotic type
Release factors
101175535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
Motif
Other DBs
NCBI-GeneID:
101175535
NCBI-ProteinID:
XP_023813662
UniProt:
A0A3P9MEV5
LinkDB
All DBs
Position
8:complement(25558163..25579255)
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AA seq
569 aa
AA seq
DB search
MEARDTAPDSWEQEDDVEAVMEGPGSNALNVNAKPFVPNVNAAEFVPVAVKTDSGELESV
VAEKLSSLKVSQSAAPVENGEADVTTEETWDEKEVETSEEEPGGGDEGPEEVPTDTPPET
LEEEEEISVPKIPPIQPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYE
REAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETDKKHFTILDAPGHKSFVPNMI
GGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLVNKMDDPTVNWS
LERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPTDLCPWYTGLPFIPHLDS
LPNFNRPSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLVMMPNRHTVEVLSLLSDD
VETDDAGPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVIIEHKSIICPGY
NAVLHIHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKE
FPQMGRFTLRDEGKTIAIGKVLKLVAERD
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgcgagacactgccccggattcgtgggagcaagaagacgacgtggaggccgtg
atggaaggacccgggtccaacgcgctgaacgtgaacgcgaaaccgttcgtgcccaatgtt
aatgctgccgagtttgttccggtggccgtgaaaacggattcgggagaactcgagtccgtc
gttgctgaaaaactttccagcctgaaggtttcacaaagcgctgcgccggtggagaacggc
gaggcggatgtgaccacagaagagacctgggacgagaaagaggtagaaacgagcgaagaa
gagccgggaggtggcgacgaggggccggaggaggttccaacagacacgccgccagagacc
ctcgaggaggaggaggaaatctcagtgcctaaaatcccccccattcaacccgacgctcca
aagaaggagcacgtcaacgttgtgtttatcggacacgtagatgctggaaaatccaccatt
gggggacaaatcatgtacctgacaggcatggtggacaaaaggactctggagaagtatgaa
agagaagcaaaggagaagaaccgagagacctggtatctgtcctgggccttagacactaac
caggaggagagggacaaaggcaaaacggtggaggtgggtcgggcgtacttcgagacggat
aaaaagcacttcactatcctggatgctcctggtcacaaaagcttcgttcccaacatgatc
ggaggggcgtcccaagcagacctggctgtcctggtcatctctgccagaaaaggagagttt
gaaactggatttgagaaaggcgggcagacgcgagagcacgccatgctggctaaaacagcc
ggggtcaagcacctgatcgttctggtaaacaagatggacgatccaaccgtcaactggagc
ttggagaggtatgaagagtgtaaagagaagctggtgccattcctgaagaaagtgggcttc
aaccccaagaaggacatccacttcatgccgtgttctgggctgacgggggccaacctgaag
gagcccacggacctgtgcccctggtacacaggtctaccattcattccacacctggacagt
ctgccaaacttcaaccgccccagtgacggcccggtccgattgcccatcgtagataaatac
aaggacatgggcactgtgattctaggaaagctggagtcgggctccatcagcaaagcccag
cagctggtgatgatgccgaaccggcacactgtggaggtgctgagtctgctgtctgatgac
gtggagacggacgacgccgggcctggggagaacctcaagctccggctgaagggcatcgag
gaggaggagatcctaccgggattcatcctatgcaacgcagagaacctgtgccattcgggg
cgcacctttgatgctcagatcgtcatcatagaacataaatccatcatctgtccgggatac
aacgctgttctccacattcacacctgcattgaggaagtgcagatcacggccttaatctgc
ctggtggacaagaagacgggcgagaagagcaagaccaggccgcggtttgtcaagcaggac
caggtctgcatcgctcgtctgcgcacagcagggaccatctgcctggagacctttaaggag
tttcctcagatgggtcgcttcaccttacgggacgaaggtaagaccatcgccatcggcaaa
gttctcaagctggttgcagagcgggactga
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