Oryzias latipes (Japanese medaka): 101175564
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Entry
101175564 CDS
T02443
Symbol
sntb2
Name
(RefSeq) beta-2-syntrophin
KO
K24064
beta-syntrophin
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101175564 (sntb2)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
101175564
NCBI-ProteinID:
XP_023811807
UniProt:
A0A3B3IF90
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Position
6:27622994..27657177
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AA seq
593 aa
AA seq
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MAVWTRADRNGQLDLLLRDRWIRVTAELTRETLTLTAEAEFAGQGANHWDHSSAGLRNGM
SNGNDPGSNLGSPGRGSSSGQDHVQNYRARGRSNSPGRAGVTRGQYEGNYGTMNSPGKYP
NNGTNSDFGSPGSSYGSPGSSFGSRQGGDFPVSVDGSSEAVRKVRVVKQESGGLGISIKG
GRENRMPILISKIFPGLAADQSRALRVGDAILSVNGNDLREATHDMAVQALKKAGKEVTL
EVKYIREVSPLFKKPSLVADLPWDGVRPQSPSYSGSEDSGSPKHSSSSSPSKDRKVISLK
MCFISRNLSMPDLENRLLELHSPDGQHTVVLRCKDGPSASSWFTAIHTNIAALLPHTLAH
INAYLGASSAAPTHPHLKHIGWLAEQVQLEGGRQQYRPVVMALTEKDILLFESVPWSRES
WSMPLLTHPLLATRLVHSGSSGGSPSQGSDMVFATRTGTSRGIESHVFRVETHWDLSSWT
RALVQGVHTAAEIIQEVSIGCTLNRQDVRLTLHFEMGFTVTREPADPPGGAVLYRYPYEK
LKMSADDGIRNLYLDFGGPEGEMVFDLHSGPKPVVFVLHSFLSAKLTRMGLLT
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcagtttggaccagagcggaccgaaacggccagctggacctcctgctccgggaccgc
tggatccgagtgacagcagaactcacccgggaaacgctgactttaacagccgaagcggag
ttcgccggacagggggccaatcactgggaccactcttcggctggcctgcgaaatggcatg
tcgaacggaaacgaccccgggtcgaacctgggcagtcccggtcgcggttcttcttcgggc
caggaccacgtgcagaactacagggctcgagggcgcagcaacagcccgggtcgggcgggc
gtcactcgcggtcagtacgagggaaactacggcacgatgaacagccccggaaagtacccg
aataacgggaccaactctgacttcggcagccccggttccagctacgggagtcccgggtcg
agtttcggatccagacaagggggcgatttcccagtcagcgtggacggctcgtctgaggcg
gtgcggaaagtccgggttgtcaagcaggagtccggcgggctggggatcagtatcaagggc
gggcgcgagaaccggatgccgatcctcatctccaagatcttccccgggctcgctgcggac
cagagccgggctctccgggtgggcgacgcgatactgtcggtgaacgggaacgacctccgg
gaggcgacgcacgacatggcggtccaggctctgaagaaggccgggaaagaagtcacgctg
gaggtgaagtacattcgtgaggtgtctccgctcttcaagaaaccgtcgctggtcgcagac
ctgccgtgggacggcgtccgcccgcagtcgcccagctacagcggcagcgaggactcgggc
tctcctaaacacagcagctcctcctccccgtccaaagacaggaaggtcatcagcctgaag
atgtgcttcatcagccggaacctctccatgccggatttggaaaacaggctgctggagctc
cactccccggacggccagcacacggtggtcctgcgctgcaaagacggcccctctgccagc
tcctggttcaccgccatccacaccaacatcgccgcgctgctcccacacaccctggcgcac
atcaacgcgtacctgggggcgtcgtctgccgcccccactcacccccacctcaaacacatc
ggctggctggctgagcaggtccagctggaaggtgggaggcagcagtaccgtcccgttgtc
atggcgctgacggagaaggacatcctgctgtttgaatctgtgccgtggagcagagagtcc
tggtccatgcctctgctgacacaccctctgctcgccaccagactggtccactccggcagc
tccgggggttctccctcccaggggtcggacatggtgtttgccactcggaccggcaccagt
cgaggcatcgagtcacacgtcttccgcgtggaaactcactgggacctttcctcctggacg
cgagctctggtgcagggtgtccacacggctgcagagatcatccaggaggtctccattggc
tgcacgctgaacaggcaggacgttcgactgacgctgcacttcgagatgggcttcaccgtg
acgagggagccggccgaccccccggggggtgcggtgctctacagatatccctatgagaag
ctcaaaatgtccgccgacgatggaatacggaacctttatcttgactttggaggtccggag
ggagaaatggtgttcgacctccactcgggtccaaagccggtggtgtttgtcctccactcc
ttcctgtcggctaagctgacccgcatgggcctcctgacgtga
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