Oryzias latipes (Japanese medaka): 101175590
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Entry
101175590 CDS
T02443
Symbol
hmgcll1
Name
(RefSeq) 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00280
Valine, leucine and isoleucine degradation
ola00650
Butanoate metabolism
ola01100
Metabolic pathways
ola04146
Peroxisome
Module
ola_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
101175590 (hmgcll1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
101175590 (hmgcll1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101175590 (hmgcll1)
Enzymes [BR:
ola01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
101175590 (hmgcll1)
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
101175590
NCBI-ProteinID:
XP_023819363
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All DBs
Position
15:complement(24251248..24264328)
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AA seq
332 aa
AA seq
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MGNFPTAVKHCLSYEQLIKDYPWLRGWLQEEKTKYPEFVKIVEVGPRDGLQNEKEVVPTK
VKIQLIDMLSGTGLSVIEATSFVSSKWVPQMSDHSDVLRGIQRAPHVQYPVLTPNMQGFQ
DAVAAGATEVAVFGSASETFSRKNINCSIDDSMLKFKEVIKAAKEQQIPVRGYVSCALGC
PYEGRIEPAKVAEVASMLYGIGCYEISLADTIGVGTPGSMLQMLQRVTQEVPISALAVHC
HDTYGQALANILTALQMGVSVVDSAVAGLGGCPYAEGSSGNVSTEDVVYMLHGMGIETGV
NLDKVMEAGDFICSALNRKTNSKVSLARNRKL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacttccccaccgcagtaaagcactgcctgagctatgagcaactcatcaaggac
tacccctggctaagaggctggctacaggaagagaagaccaagtatccagaatttgtaaaa
attgtagaagttgggcctagagatggacttcaaaacgaaaaggaagttgttccgacaaaa
gtaaaaatccaattgatagacatgctctcaggaacaggcctttctgtgatcgaggccacc
agcttcgtctcttcaaagtgggtgccgcagatgtcagatcacagtgatgtcctcagagga
atccagagagccccacatgttcagtaccctgttttgacacctaatatgcaaggcttccag
gatgctgttgcagctggtgccactgaagtggctgtgtttgggtctgcgtcagaaaccttc
agcagaaagaacattaactgttccattgatgacagcatgctgaagtttaaggaagtcatt
aaggctgccaaagagcaacaaattccagtccgtgggtatgtttcttgtgctcttggatgc
ccttatgaaggtcgcattgagcctgcaaaggttgctgaggtggcaagtatgttatatgga
attggatgttatgagatttcactagcggacactatcggtgttggaacaccaggttccatg
ttgcagatgctgcagagagtaacgcaggaagttcccatcagtgctcttgcagttcactgc
catgacacatatggacaggcacttgctaacatcctcacagctctacagatgggggtctcg
gtggtggattctgcagtagcaggccttggcggttgcccctatgcagaaggttcatctggg
aatgtttccacagaggatgttgtctacatgctccatggcatgggcatagaaacaggtgtg
aatcttgataaagtgatggaggccggtgactttatctgcagcgctttgaaccgcaagacc
aactccaaggtctccctggcaagaaacaggaagctgtga
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