Oryzias latipes (Japanese medaka): 101175649
Help
Entry
101175649 CDS
T02443
Symbol
rere
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101175649 (rere)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
101175649 (rere)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
BAH
ELM2
GATA
Myb_DNA-binding
CCDC47
DUF7573
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
101175649
NCBI-ProteinID:
XP_023812303
LinkDB
All DBs
Position
7:complement(10323211..10468996)
Genome browser
AA seq
1544 aa
AA seq
DB search
MTADKEKEREKERDRDRDRDKREAGKSRRQEGDRGDRESESSRPRRSCTLEGGAKNYAES
EHSDDDDNDNGSTGGGSGTAEEAGKKGKKKMPKKKSRYERTENGEITSFITEDDVVYRPG
DCVYIESRRPNTPYFICSIQDFKLSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRNNEND
SGRELVITDPVVRSRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFRARIDSFFYIL
GYNPETRRLNSTQGEIRVGPSHQAKLPELQPFPSPGGHAVTENEELVWMPGVNDCDLLMY
LRAARSMAAFAGMCDGGSTEDGCLAASRDDTTLNALNTLHESSYDAGKALQRLVKKPVPK
LIEKCWSEDEVKRFIKGLRQFGKNFFRIRKELLPNKETGELITFYYYWKKTPEAASCRAH
RRHRRQPVFRRIKTRTASTPVNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACRHC
FSTTSKDWHHGGRENILLCTDCRIHFKKYAELPPIEKPVDPPPFMFKPVKEEEDGLSGKH
SMRTRRNRGSMSTLRSGRKKQPASPDGRASPTNEDLRSSGRTSPSAASTDSTDSKTDSMK
KPSKKIKEEAPSPMKSTKRQREKGTSDSEETERATAKKSKTQELSRPDSPSECEGEGEGE
SSDGRSINEELSSDPKDIDQDNRSSSPSIPSPRDNESDSDSSAQQQQLLQSQHPPVIQCQ
PGTSTASAAPPPPPTSNPLLPPQVPTAAASASLPPQSLAQAGPMSLIQSGASLHPQRLPS
PHSPLTQAPPSGPTVPPQSLPSPHHGPLPPVPHPLQPVPPHLPHPHSMTPQGFPVAPSQV
PPPPVSSQSQQRPHSPPSQSQSSSQSGGQPPREQPLPPATMSVPHIKPPPTTPIPQMPTP
QSHKHPPHLPAPPFLPMPSNLPPPPALKPLSSLSNHHPPSAHPPPLQLMPQGQQLQPPPA
QPPVLTQSQSLPPSANHQPPAAPPLPHTVSHPTAGPTQPPFSSHPFSTVLPPTGPPPSSS
NSMPSLQPPSSSSSISMPLPASVPCAGPGPSIPPVNIKEEPLDEPEEPESPPPPQRSPSP
EPTVVNTPSHASQSARFYKHLDRGYNSCARTDFYFTPLASSKLAKKREEALEKAKREAEQ
KAREEKEREREREKEREREREREKEVERAAKASSSSHESRMGEPQMAGPAHMRPPFDGPP
TTIAAVPPYIGPDTPALRTLSEYARPHVMSPSNRNHPFFVSLNPADPLLAYHMPGLYNAD
PAMRERELREREMREREIRERELRERMKPGFEVKPPEMETLHPSTNPMEHFVRHGAITLP
PMPSPHPFASYHPSLNHLERERLALVGPQLRPEMSYPERVAAERLHAERMATVANDPIAR
LQMFNVTPHHHQHSHIHSHLHLHQQDPLHQGGGECLVCPPGSGSHPLAVDPLGAGPHLAR
FPYPPGSIPNPLLGQPPHEHEMLRHPVFGFMCPIGAPYPRDLPGGIPPPMSAAHQLQAMH
AQSAELQRLAMEQQWLHGHHMHGGPLPGQEDYYSRLKKESDKQL
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgacaaagagaaagaaagggagaaagaacgcgacagagacagggaccgggac
aaacgggaggccggtaagtcccgccggcaggagggggaccgcggcgaccgagaaagtgag
agctccaggccccggcggagctgtacgctggaaggcggggccaagaactatgcagaaagc
gagcacagcgacgatgatgacaacgacaacgggagcacaggcggaggcagcggcacagcc
gaggaggctggcaagaagggcaaaaagaagatgcctaaaaagaagtcacgctatgagcgc
acagagaacggagagatcacatccttcataactgaggatgatgttgtttacagacctgga
gattgtgtgtacattgagagtcggcggcccaatactccttacttcatttgtagcatccaa
gacttcaagctgagcaaacgggaccatctgctgatgaatgtgaaatggtactaccgccag
tcagaggtgcccgactccgtgtaccagcacctggtgcaggaccgcaacaacgaaaatgac
tcgggccgggaactggtcatcacagacccagtggtgaggagtcgagaactcttcatctcc
gactatgtagacacttatcatgctgctgctctcagggggaagtgcaacatttcccatttc
tctgatatttttgctgcccgggagttcagagctcgcatcgactcctttttctatatcctc
ggatacaacccagagaccaggcggttaaacagcactcagggggaaatccgagtcgggccc
agtcatcaggccaaactcccagagcttcagcctttcccatctcctggtggccatgcagtg
actgagaacgaggagctggtctggatgccaggagtcaacgactgcgaccttctcatgtac
ctcagagccgcaagaagcatggctgcctttgcggggatgtgcgacggaggctcgactgaa
gatggctgtctggcagcctcacgagatgacactacattaaacgcacttaatactcttcat
gagagcagctacgatgcaggcaaagctctgcagcgcctggtgaagaagccggtacctaag
ctgatagaaaagtgctggtctgaagatgaagtgaagcgcttcattaaaggcttgagacag
tttggaaaaaactttttcaggatccggaaagagctgctgcccaacaaagaaacgggagag
ctcatcaccttttactactactggaagaagactcctgaggcagccagttgtcgagcccac
cgcaggcatcgccggcagcccgtcttccgccgcattaagacaagaactgcttcaactccg
gtcaacaccccctcacgccccccatccagcgagttcttggacctcagctcagccagcgaa
gatgactttgacagtgaggacagcgagcaggagctgaagggctacgcgtgccgccactgt
ttcagcaccacctccaaggactggcaccacgggggccgagagaacatcttgctgtgcacc
gactgccgcattcacttcaagaagtacgctgagctgccccccatagagaagcctgtggac
cctcccccatttatgttcaagcctgtcaaggaggaagaggatggactcagtgggaagcat
agcatgaggaccagacggaaccgaggctcgatgtcaacgctacgtagtggtcgcaagaag
cagccagctagtcctgatggccgagcctcacctaccaacgaggacctgcgctcgagtgga
cggacgtcacccagcgccgcaagcacagacagcaccgacagcaagacagactccatgaag
aagccaagcaaaaaaattaaggaagaagctccttcacctatgaaaagcaccaaacggcaa
agagagaagggaacttcagactctgaggagactgagagggccactgccaaaaagtccaaa
acacaagagctgagtcggccagactctccctcagaatgcgagggggagggggagggagag
agctctgacgggcgcagcatcaacgaggagctcagtagtgatcccaaagacattgaccag
gacaaccggagctcctcccccagcatccccagtccccgtgacaacgagagcgactcggat
tcctctgctcagcaacagcagctactgcagagccagcatccccctgtcatccaatgtcaa
ccaggcacctccactgcctctgcagcgccccctccacctccaacctcaaacccgctgctg
cctccacaggtccccactgcagctgcttcagcctcactacctcctcagtctctggcacag
gctggccccatgtctctcatccagtctggagcatcgcttcaccctcaaaggctgccttct
cctcattcacctctgactcaggctccaccttcaggccccacagtcccacctcagtcttta
cccagcccacatcatgggcccctccctccagtgccacatccattgcagcctgtcccccca
catttgcctcaccctcactccatgacccctcagggattccctgtggccccctctcaggtt
ccacctcccccagtctccagccagtcacagcagaggcctcactcgcctccttctcaaagc
cagtcatcttctcaaagtggaggccagcctccacgggagcagcccctgcctcctgcaacc
atgtctgtacctcacatcaagccccctccaaccacacccatccctcagatgcccacccca
cagtctcacaaacatccgccccacctgccagcgcctcctttccttcccatgccttcaaac
cttcctccacctcctgctctcaagcccctcagctccttatccaaccatcatcctccgtca
gcacaccctccccctctgcagctcatgcctcaggggcagcagcttcagcctcccccagcc
cagcctccagttctcacccagtcgcagagccttccaccgtcagccaaccaccagcctcct
gctgctcctcctttaccgcacacagtctcacaccccacagccggtcccacgcagccaccc
ttctcctctcatcctttcagtacagttctacctccaaccggccctcctccatcctcatca
aactctatgccaagcctccagcctccctcttcttcctcttccatctccatgcctctccct
gcctcagtcccgtgtgctggtcccggcccatcaatcccacctgtcaacatcaaggaggag
cctctggatgaaccagaggaacccgagagtccaccgcccccacagagaagcccctccccc
gagcctacagtggtcaacacgcccagccacgccagccaatccgcacggttctacaagcac
ctggaccggggttacaactcctgcgctagaacagacttttacttcactccacttgcttcg
tccaaactggccaagaagcgggaagaggcgctggagaaagccaagagggaagcagagcag
aaggctagggaggagaaggagcgagaaagggagagggaaaaggagcgggaaagagagcgg
gagcgggagaaggaagtggagcgtgccgcgaaagcctccagctcatctcatgaaagcaga
atgggggaacctcaaatggctggccccgcccacatgcgaccccccttcgatggcccccca
actacaattgcagctgtgcctccatacattggccccgacacccctgccttacgcacactc
agcgagtacgccaggccccacgttatgtcgccgagcaatagaaaccaccccttctttgtg
tcgctcaaccccgctgacccgctgctggcctaccacatgccgggcctgtacaacgccgac
cccgccatgagggagcgcgagctgcgagagcgggagatgcgtgaaagggagatccgtgag
cgggagctcagggaaaggatgaagcctggttttgaagtcaagcctccagagatggaaaca
ctccacccctccacaaatcccatggagcactttgtcaggcatggcgccatcactctgccc
cccatgcccagccctcaccctttcgcctcttaccacccaagcctgaaccacctagagcgt
gagcggctagccctcgtggggccccagctgcggccagaaatgagctaccccgagcgggtg
gctgcggagagactccacgccgagaggatggccaccgtggccaacgaccccattgctcgt
ctgcagatgttcaacgtcacgccacatcaccaccagcactcgcacattcactcccatctg
cacctccaccagcaagacccgcttcaccaaggtggtggtgaatgtcttgtgtgtcctcca
ggctcggggtcccaccccctggcagtggatcccctgggcgccggaccccacctggctcgc
ttcccctacccgcccggcagcatcccaaaccctctcctgggtcagccaccgcacgaacac
gagatgctgcgccacccagtcttcggcttcatgtgtcccataggtgctccatacccacgg
gacctaccaggaggaattccaccccccatgtcagcggcccaccagctgcaggccatgcat
gcacagtcagcagagctgcagaggctggcgatggagcagcagtggctgcatggccaccac
atgcatggaggacctctgcccggccaggaggactactacagccgtctgaagaaggaaagt
gacaagcagctgtaa
DBGET
integrated database retrieval system
