Oryzias latipes (Japanese medaka): 105353666
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Entry
105353666 CDS
T02443
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
105353666
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105353666
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
105353666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CATSPERB_C
Motif
Other DBs
NCBI-GeneID:
105353666
NCBI-ProteinID:
XP_023812767
UniProt:
A0A3B3I4N1
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All DBs
Position
7:28948156..28990475
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AA seq
670 aa
AA seq
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MGCRLTRAKAKAKAREPSRHHHREQLHFVDEYGQPITVQLEDQRGHAHRRRHSRRATECS
TTTERQWEALRAMGLVEGQEVQEDSYSTGPYYGHMSVSPDLYPASNHMLMQPEVYSSNGY
MPTSSDERHPCNSYLPSVSYSLDHLDRLDYQGPEMLPYEPNSDSCLIGCYGGEEMEPKNF
PRQANYHPAWRSDRPLGYLPLSELDSGLGCGPDSPHHRVALSEAETDAMSSLPGHTPSSQ
GSSSSSESLISSEPSDSGFHSVSTGEHRRLHKIHGSHTQRQAHLLRSGHSPRDQRGRWDL
ESIPETTPMIHSGAPRASQCSVGNSTTTVVHFHRAERSPTLPRHLSPPSPSSGCRTEPCQ
RRALWLEQQHQLQGRGRTMEAPGRSRTITDLSEAQRHRRASHPDMIYSNTQRNAQQNICA
GTTKNTMGPRSRASYPSNFHPPSHLSIDRTSITNYQNMFRNSRSSSRSREEDSLSKSPGS
GSSGMPEWRGSQTLGSRTEKPKSVSVPCYSTLGAPQPGPRSPPSPRSRLSNQKSVRNQLL
KARAYRLARERSEVTTDEEVRGDGAREGDEEGDDGRRAGRYWSRTERRRHLALSRQHRER
RGGAEEQVGMGLGPLSSQTVLELSHMKQNRLRNSKLLDDWTTVEELLTHGTRVESDSQLC
PSPLLSVTTV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgggctgccgtcttactcgagccaaggcaaaggcaaaggcccgtgaaccttcccggcat
caccacagagagcagttgcactttgttgatgaatatggccagccaatcactgtgcaactg
gaggaccaaagggggcatgctcacagaaggcgacactcccggcgtgcgactgaatgcagt
accacaacagaaagacaatgggaagccttgagagcaatgggattggtggagggacaggaa
gttcaagaagacagctacagtacaggaccttattatggacacatgtccgtgtcacctgac
ctctaccctgccagtaatcatatgttgatgcaacccgaagtgtactcatctaacggctac
atgcccacatcatcagatgaacgacatccgtgtaacagctacctgcccagtgtctcatac
agcttagaccacctggaccgacttgattatcaaggtccagagatgttgccttacgagcct
aactcagacagttgtctcattggctgctatggtggagaggaaatggaacctaagaatttc
ccccgacaggcaaactatcatcctgcctggaggtctgatcgtcccctaggataccttccc
cttagcgagcttgacagtggcttgggatgtggccctgacagcccacatcacagagtggca
ctctccgaagccgagacagatgccatgtcatcattgccagggcacaccccttcatcccag
ggctcctcctcctcttcagagtccctgatttcctcagagcccagtgactctggctttcac
agcgtcagcaccggggaacacaggcgactgcacaagatacatggcagtcacactcaacgc
caagcccacctcctccgctcaggccattcccctcgagaccagagaggacgctgggatctg
gagtccatccctgaaacaaccccaatgatccacagcggagcaccacgtgcatctcaatgc
tcagttggtaacagcacaaccactgtggttcactttcacagagctgagaggagccccact
ctaccacgacacctgtcaccaccgtcgccctccagtggttgtcggactgagccttgccag
cgtagggcgctgtggttggaacagcagcaccagctccaaggaagaggcaggacaatggaa
gctccagggaggagtcgaacaataacagatctgagtgaagcacagagacaccggagggca
agtcaccccgatatgatctattcaaacactcagagaaatgcacagcaaaacatctgtgca
ggcacaactaaaaacacaatgggccccaggagcagggccagttatcccagcaactttcat
cccccaagtcacctcagtatagacagaaccagtatcaccaactatcaaaacatgttcaga
aacagccggagctctagtcgcagtagagaggaggattctttgtccaagagtcctggatct
ggctccagtggcatgccagagtggcgaggctctcagactcttggaagtcgcacagagaaa
cccaaaagtgtatctgttccttgttacagcacacttggagcccctcaaccaggtcctcga
tctccaccctctccccgctctagactgtccaaccagaagtccgttaggaaccaactgctc
aaagccagagcttaccgactggctagagaacgcagtgaggtcacaacagatgaagaagta
agaggagatggggcaagagaaggggacgaggagggggatgatggtcgacgagcgggacgg
tactggagtcgaacagagagaaggcgccacttggcgctgtcgcggcaacacagagagaga
agggggggggcagaggaacaggtggggatgggcctggggcctttgtcttctcagacggta
ctagagctgagccacatgaagcagaaccgcctgaggaacagtaagttacttgatgactgg
acaacagtggaggagctgctgacacatggcacacgagtggagagtgacagtcagctttgt
cccagccctcttttgtcagttactactgtctaa
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