Oryzias latipes (Japanese medaka): 105354003
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Entry
105354003 CDS
T02443
Symbol
gabra5
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5 isoform X2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04080
Neuroactive ligand-receptor interaction
ola04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105354003 (gabra5)
04082 Neuroactive ligand signaling
105354003 (gabra5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
105354003 (gabra5)
Ion channels [BR:
ola04040
]
Ligand-gated channels
GABA-A
105354003 (gabra5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
Motif
Other DBs
NCBI-GeneID:
105354003
NCBI-ProteinID:
XP_011472720
UniProt:
H2MMD6
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All DBs
Position
4:27758520..27795117
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AA seq
459 aa
AA seq
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MGDGMRCSSAMTRLWLSALLFTATYRLSISQEVTGTPKEAELNDNITIFTRILDGLLDGY
DNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKGPMEMLPL
NNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAECPMQLEDF
PMDAHACPLKFGSYAYPVSEVVYTWTKGAAKSVVVAEEGSRLNQYHLIGQTAGTEDIYTS
RGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTTVLTM
TTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKAMEAQ
QPKKKDPLALSKKSNNSCPTGVNYTANITKDASISTISNSTTVQLKPPETKAPDPKKTYN
SVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGAV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatggaatgcgctgcagctccgcaatgacacgtctgtggctctccgctctgctt
tttaccgccacctaccggctgagcatctcccaggaggtaactggtactcccaaagaggca
gaattaaacgacaacatcaccatcttcacccgcatcctggatggacttctggatggatac
gacaacagacttcgccctggactgggtgagaaagtgacagagattaaaaccaacatcttc
gtcacaagttttggtccagtctctgacacagaaatggaatacaccattgatgtgtttttc
cgtcaaagctggaaggatgagcggctgtgctttaaaggccccatggaaatgctgcctcta
aataacctcttggccagtaacatctggacccctgacaccttcttcctcaacgggaagaag
tccatcgctcacaacatgaccacgccgaacaagctgctgcgcctcaaagatgacgggacc
ctcctgtacaccatgaggctcacaatctcagcagaatgtcccatgcagctggaagacttt
cctatggatgctcatgcgtgtcccctaaaatttggaagctatgcatatcccgtctctgag
gttgtctacacctggactaaaggagcagccaagtcagtggtcgtcgcagaagaaggctcg
cggctcaaccagtaccacctgatcggtcagaccgcgggaacagaggacatctacaccagc
agaggtcaatatacagtgatgatggcccacttttacctgaagaggaagattggctacttt
gtgatccagacctacatgccgtgcttcatgactgtaattctgtctcaggtttcgttttgg
ctcaaccgagagtctgtgcctgcaagaacagtttttggtgtgaccacagtactcaccatg
accactctaagcatcagtgctcgaaactccctgcctaaggtggcatatgccactgccatg
gactggttcattgcggtgtgctacgcctttgttttctctgctctgattgaatttgccaca
gtgaattattttaccaagcggagctgggcttgggatggaaaaaaggccatggaagcccag
cagcccaagaaaaaagaccctttagctctttcgaagaagtcaaataactcctgcccgact
ggtgtaaattacacagccaacatcacaaaggatgcctccatttctaccatctcaaacagc
accactgttcagctcaagcctcctgaaaccaaggcaccagaccccaaaaagacttacaac
agtgtgagcaagattgacaagatgtccaggattgtgttccccgttttgtttgggaccttt
aaccttgtgtactgggccacgtatctcaacagggaaccagtgatcaaaggagcggtgtag
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