Oryzias latipes (Japanese medaka): 105354303
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Entry
105354303 CDS
T02443
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
105354303
Cell adhesion molecules [BR:
ola04515
]
Cadherins
Cadherin related
105354303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Cadherin_CELSR2_9th
Cadherin_pro
Ig_Shg
EGF
Cadherin_4
hEGF
EGF_Teneurin
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
105354303
NCBI-ProteinID:
XP_023811882
UniProt:
H2MNH2
LinkDB
All DBs
Position
6:complement(30614622..30745464)
Genome browser
AA seq
2914 aa
AA seq
DB search
MIWGILLCCLVTPASGSLSEGRLPFFHGHVFENSPVASKVNGLSIPVRRVNAQKWCPASR
MHFRLYGNGSEDFCAFAHHKRGNILLKTSRVLDRELRSEYRLSLGQCCRTCASESPVFEV
ASVKVDVLDTNDHQPTLLSASSIHISLDDTTALRSVIYSLEAADEDGGKNAELAFVSAPA
NGSLYVVPKTGEVLLVDSILGRDSTIKVYVYARDHGWPPLTSRAVLMTVSPRRWETGRST
ARSEASPRAGRAPRALLDPGTVMTLNVSEDVGVGSVIVSLNPTRFQSAAYELIFPEPEGA
AVSVGRDSGDITVTRRLDREAEPVVELTVKIQDKKGPDWYLNKVKLKITDVNDNVPEWNM
KPYPYLAVVPPDAPMGTFVYQLQARDGDEGRSGEVEYFLSDGGDGCFAVDKKTGRVLTTG
LLFQKDREYLLSVVALDGMGSHSEPAMLSVVAGARPPQFTNSSYSISIPENTPEGQPFLV
VSAISFQKLQISYSLLINPSSLFSIRQETGEISLTRTLDYESDQRRYLLMVRAREDPDSL
STATEVQVFITDENDCLPEFFQSIYSVDGVPETVTTATSLLQVLATDCDSGFNAELTYYT
LSPDFSISPHGTIFPARRLDFERPNHLYEFVVMAVDGGDEPHSGTATVRVRIANVNDEAP
EFSQPVYRTFVSEDAGPNTLVATVLAKDPDGDGITYSITAGNEEANFVIDSLKGLIRLRS
SPLPKLQGLEYVLNVTATDDNASGGPHPLSSTARVIVGVDDVNNNKPVFEECLQYREQAS
VLENQPTGTFVLQVHAVDADEGANGKVKYGLMHRDSATPAFRIYPDTGVIVTARRFDRER
QREYSITVTATDWAEEPLIGICQLTVQILDQNDNSPKFENLRYEYFLREDTLVGTSFLRV
AAHDDDFGSNAAILYSMSQEQPEYLQVNPVTGWVYVNQPISQTAYITRDIIATDGGNRSS
SVELAVTITNVKNQPPRWEKDSYSVIIPENTPRDTPIVTIKATSQLRDPRVTYNLEDGMV
PETNMPVRFYLSPNREDGSASILVSEPLDYETTAFFSLQVRAQNVAAVPLAAFTRVYVNI
TDVNDNVPFFTSSIYEASVTEGAQVGTSVLQVSAHDKDLGLNGEITYSLLNDSSGDHRLF
RIDPKYGVIFTEAVFDREARSSYLLEVQSEDGEESARPGKNKQPNTDTAYVRVFISDVND
NKPVFAQRLYEVGVDEDADVGLAVVTVSASDEDEGANTKLRYQITSGNKGGAFDIEPEVG
TIFIAQPLDYEQQKRYKLLVLASDGKWEDYAAVVVTVVNKNDEAPVFSMSEYYGSVIEEL
DGSPVFVLQVTASDPDKDADQGAIRYSIHGQGAESHFMINDITGEMYAQRTMDREERAVW
RFVVMATDEEGEGLTGFTDVIISVWDINDNSPTFLCAPDNCNTNVAENSPPGTFVMEMTA
VDADDAAVGQNAILTYRITENAHSPNGAELFSIDSSTGSISVAADGLDRELADRHHLVIE
AMDGGGMTGTATVTVAVTDINDHVPTFREEWCGASVPESTQQDAPLLELSAVDPDEGVHG
QLSFSVVGGDVEQPFYMVSHRLEQRATLRLKRKLDFENPGEQRFNLTIRVEDSDFSSLIN
CLIQVEDENDNAPVFVPKTHQLSALPEDVSVGTSVVQVVATDSDSGPNGDIWYSILPQSD
PYDQFTVSHAGVVAVAKPLDRETVAGYELVVMATDRGMPALTGSVTVHLPLLDLNDNGPE
LEAAYTPVLWENGPAPQVVWLNRSSTLLHVVDRDSPEHGPPFLLSLPSFYSADFHLQDHG
NGSATLTTLRRFDRERQSEFHLPVIMIDSGIPPITATNTLTITIGDHNDNAHQAGEKDVY
VHSRKGRMANAALGKVYAPDPDDWDNKTYTLETSASKYFTLNRTSGELTIRQNTPAGSYW
LKVGVSDGVWPDVVSGVRVHVRELEEKALLSSASLRLTGITAREFIDSNVEGRRRLEAFW
DFLSEALSVSPGSINIFGVADRDEKTVDVHFYVLTDKGYLQAEKLHSVFQAHKQKVQSLL
RATVSQVQVDECSRSDCAASGGCSTQLSITDTPTLTDSGALSLVSVKVTTSASCGCAARE
MTHRPCASYPTNPCLNGGTCIDTQNGYRCYCPPQLEGPSCQQTILGFLGNGYAWFPPIRP
CFDSHLSLEFMTEEDDGLLLYAGPLATLLPGEGEDYMAIELIGGTPSLKVNHGSGTLVLQ
LINNVGVADRRWHRLDVRSNSKEVRFTLDRCSTAIVMETEGVDSWAMTEDRSSCEIRGVT
PNRDKYLNGSHVLQLGGVSENISYEYPQLQFKHFNGCIRNLLVDSKLYDLGSPAESYNTS
PGCSLIDDHCTNVGQLPPCGKRGRCHGERGSFSCLCETGFSGSRCDQAAAEFSFDGRSHV
QVQLFWSPPARQTFVQIGVRTRAASGVILSLMSQEQSEYICLEVVRGLLAVFYNLGDGDH
NMTLPHLRLNDGEWHQVELDRFGREFTLRLDGGGGQQEITASPGQSQEILIDHTMVMLGN
SFPSGHNRSFVGCLRDVRLNGHPLPLEKEKPSKGLQVVSSQGVSVGCSSDACRKQHCAPP
LVCVDLWRHQECRCPPGHMTRESPSGKVCIYTLCASRPCRHGTCVAHSPSRYSCLCSDGY
RGRHCEVALAVFHDDDSLSLSSMFAISICVMAFLVLMLGLFLYSCWRKHKGLKEGVYHVS
AHHGEWEDIRENVLNYDEEGGGEQDQNAFNMVELQRSLQPSPAQSLRYSYPQSVISYPQT
KPPQESSKRGMPNGNGSAAIALRLAIPASETETLSSPLTFRRSQRAFSFSSQDLARYLCE
VIRDMEHPEELGTMTTPRRSSGKEKSLAAVRSLSSLNASQGSEVRFHASQSIRMDRFKAL
RAVVSDMKGDSKTAEGQRSKLKESRGQLNCEKSG
NT seq
8745 nt
NT seq
+upstream
nt +downstream
nt
atgatttggggaattctgctgtgctgccttgtaacgccggcttctggatccctatctgag
ggacggctgcctttcttccacgggcatgtttttgagaactcaccggtggcttccaaagta
aacggactgagcattccggtgaggcgcgtcaacgcgcaaaaatggtgtccagcctcccgg
atgcacttcagattgtacgggaacgggagcgaagatttctgcgcgttcgcccaccacaag
cgagggaatatattgctcaaaacttcccgggttttagacagagagctccgttcagagtac
cgactgagcctcggtcagtgctgccggacgtgcgcgtcggagtctccagtcttcgaggtg
gcctcagtaaaagtggacgttttggataccaacgaccaccagccgactctgctgtccgct
tccagcatccacataagtttggatgacaccaccgctctccgcagtgtcatctacagtctg
gaggctgcggacgaggacggcgggaagaacgcggagttggcgtttgtctccgcgcccgca
aacggctctctctacgtggtcccgaagaccggggaagttttgctggttgactccatcctg
gggcgcgactccacgattaaagtctacgtttacgccagggaccacggatggccccctctg
accagccgcgccgtgctgatgaccgtgtctccgcgccggtgggagaccgggcgcagcacg
gcccggtctgaggcgtcgccgagggcagggcgcgcgccgcgggcgctgctcgaccccggc
accgtgatgaccctcaacgtctccgaggacgttggcgttggctcggtcatcgtgagtctg
aatcccaccaggtttcagtccgccgcctacgagctgatcttcccggagccagagggcgcc
gcggtgtccgtgggccgagacagtggagatatcaccgtcacccggaggctggaccgggag
gcagagccggtggtggagctcactgtaaagatccaagataaaaaaggcccggactggtac
ctgaacaaggtgaagctgaaaatcactgatgtcaacgacaatgttcctgagtggaatatg
aagccgtatccgtacttggctgttgttcctcccgatgcccccatgggaacgtttgtctac
cagctccaggctcgtgacggggatgagggcaggagcggggaagtggaatatttcctgtca
gacgggggtgacggctgcttcgctgtcgacaagaagacgggccgggtgctgaccaccggg
ctgctgtttcagaaggacagagagtacttgttgagcgtggtggccctggacggcatgggg
agccacagtgagcctgctatgctctccgtggtggcgggggccaggccaccgcagttcacc
aacagcagctactccatctccataccagagaacacgccggaaggacagcccttcctggtg
gtgtcagccatttccttccagaagctgcaaattagctacagcctgctgatcaatcccagc
agccttttcagcatccgccaggagacaggggagataagtttgaccaggacgcttgattat
gagagcgaccagaggcgctaccttctgatggtgcgagccagggaggaccctgacagcctg
agcacagccacagaggttcaggtgttcataacggatgagaacgattgtctcccggagttt
ttccagtccatctacagcgtggatggagtccccgagacagtaaccacggcaacatccctg
ctgcaggttttagccacagactgtgactcggggttcaacgctgagctcacttattacacc
ctgagcccggatttcagcatctccccccacgggaccattttccctgcgaggcggctggac
ttcgagaggcccaaccatctctatgagtttgtggtgatggcggtggacggcggcgatgag
ccacactcaggaacggcaacggtccgcgtgaggatcgcgaacgtcaacgatgaggcgcct
gaattctcccagcctgtataccgaacgttcgtctctgaggacgcgggccccaacactctt
gttgcgactgttttggccaaagatccagatggagatggcatcacatactccataacagca
ggcaacgaggaagcaaacttcgtcattgacagcctgaaagggctgattcgtctccgctcc
tcgcccctgccaaagcttcaaggtttggagtatgtccttaatgtaacagccacggatgac
aatgcgtcaggcgggccgcatcccctctcctccaccgcccgggtcatcgtcggagtcgac
gacgtcaacaataacaaacctgtttttgaggagtgcctgcagtaccgggagcaggcgtcc
gtgctggagaaccagccaacggggacgtttgtcttgcaagtgcacgccgtggatgcagat
gagggcgccaatggaaaagtcaaatatggcttaatgcacagagacagcgccactcctgct
ttcaggatctacccggacacaggagtgatcgtgacagcgcggcgcttcgacagggagcgg
cagagagagtactctattacagtcactgccacagactgggcggaggagccgctcattggc
atctgccagctcaccgtccagatcctggatcagaacgataacagccccaagtttgagaat
ctgcgctacgagtacttcctgagggaagatactttggttgggaccagcttcctgcgtgta
gcggctcacgacgatgactttggctccaacgccgccatcctgtactccatgtcgcaggag
cagccagagtacctgcaggtcaatcctgtcactggatgggtttacgtcaaccagcccatt
tctcagactgcttacatcacacgggacatcatagccaccgatggaggaaaccggagctcc
tctgtggagctggcggtcaccatcaccaacgtgaagaaccagcctccacgctgggagaaa
gacagctacagcgtcatcatccctgagaacacgccgagggacacgcccattgtgacgatt
aaagccacctcccagctccgtgaccctcgggtgacctacaaccttgaagacgggatggtc
cctgaaaccaacatgccagttcgattctacctctcccccaaccgagaagacggctcggcg
tctatcctggtgtcagagcctctggactacgagaccacggcgtttttctccctgcaggtc
cgggcgcagaacgtggcggctgtgcctctcgctgccttcaccagggtttatgtcaacatt
acagatgtcaacgacaacgtgcccttcttcacgtcttccatctacgaggcttcggtgaca
gaaggagctcaggtcgggacttcagttctgcaggtgtctgctcacgacaaagacctgggt
ctgaacggagagatcacctacagcctgctgaacgacagcagcggcgaccaccgcctgttt
cgcatcgacccgaagtacggggtcatcttcacggaagccgtttttgaccgcgaggctcgc
agctcttacttgttggaggttcagtcagaagatggagaggagtctgcgaggcccggcaag
aacaagcagcccaacacagacacggcgtatgtgagagtcttcatcagcgacgtcaacgac
aacaagccagtcttcgctcagcggctgtatgaagtgggcgtggacgaggacgcggatgtg
ggcctggccgtcgtcaccgtcagtgcgagtgatgaggacgaaggcgccaacaccaagctg
cgctaccagataacatctggtaacaaaggtggggcttttgacattgaaccagaagttgga
actatttttatcgcacagccactggattatgagcagcagaagagatacaagctgctggtg
ctggcctcagatgggaagtgggaggattacgcggctgttgtggtgactgtggttaataag
aacgacgaggcacctgtgttttccatgagcgaatactacggatctgtcatagaggagctg
gatgggtcacctgtgttcgtcttacaggtgacagccagtgacccggacaaagatgcagac
cagggcgccatacgatactccatacatggccaaggggcagagtcgcattttatgattaat
gatatcacgggggagatgtacgctcaacgtaccatggaccgagaagaacgcgctgtctgg
cgctttgttgtcatggcaacagacgaagaaggcgagggactaactggctttacagatgtt
attatcagtgtgtgggacatcaatgacaactcccctaccttcttgtgcgcgcctgataat
tgcaacactaatgtggcagagaattctcctcctggaacgtttgttatggaaatgactgcg
gtggacgccgacgatgcagccgtgggccagaacgccatcctcacatacaggatcacagag
aacgctcacagcccaaacggagcagaacttttctcgatcgactccagcaccggctccatt
tctgtggcagcggacggtctggatcgagagctggccgatcgccaccacctggtcatagag
gccatggacggagggggcatgacggggacagccaccgtcaccgttgcagtgacggacatc
aacgaccatgtgccaacgtttcgagaggagtggtgtggtgctagcgtccctgagagcacg
cagcaggatgctcctctcctggagctgagcgccgtggaccctgacgaaggcgtccacgga
cagctgtccttcagtgtggtggggggcgatgtggagcagccattctacatggtcagtcac
agactggaacagagggccactctgaggctgaagaggaagctggactttgagaatccaggg
gagcagcgttttaacctcaccatccgggtggaggactcagacttttccagtctcattaac
tgtctgatccaggtggaggatgagaatgacaacgccccggtgtttgtgcccaaaacccac
cagctctctgcgttgcctgaagacgtgtctgtgggaaccagcgtggttcaggtggtggcc
accgactcagactctggtccaaatggggacatctggtacagcattcttccccagtcagac
ccttatgatcagtttacagtcagccatgctggtgtggttgctgtcgccaagccactggat
agggagacggtggcaggatatgagctggttgtcatggcaaccgaccgtggcatgccagct
ttgactggcagtgtcacggtccacttgccgctgctagacttgaatgataacgggccagag
ctggaggccgcctacacgccggtgctgtgggagaacggtccagcgcctcaagtggtctgg
ctcaaccgaagctccactctgctccatgtggtggacagggactccccagagcacgggccc
cccttccttctgtccctgccctcgttttattccgccgacttccatctacaggaccatgga
aatggctcggccacgctcaccaccctccggagatttgatagggaaaggcagagcgagttc
cacttgcctgtgataatgattgacagtggcattccaccgataacggccacaaatacgctc
accatcactattggcgatcacaacgataacgcccatcaggcgggagagaaagacgtctat
gtgcatagccgtaagggaaggatggcaaatgcagcgctagggaaggtttatgcccccgat
ccagacgactgggacaacaagacctatactctggagacaagtgcatccaaatacttcact
ttgaacaggacctcaggagagctgaccatcaggcagaacacgccagcaggcagctactgg
ttgaaggtcggggtgtcggatggggtgtggcccgacgtggtctcaggagtcagggtgcat
gtccgggagctggaggaaaaggcccttctgtcatctgcctctctgcgtttgacggggatt
acagccagagagtttatcgactccaacgtggaggggaggagacggctggaggcgttctgg
gacttcctgtctgaagccctgtccgtcagcccaggaagcatcaacattttcggcgtcgcc
gacagagacgagaaaaccgtggacgtgcatttctacgtgctcactgataagggctacttg
caagcagagaaactgcacagtgtattccaagcacataaacagaaggtgcagtcgcttctg
cgtgccactgtgagccaggtgcaggtggatgagtgcagccgctccgactgcgcagcgtcc
ggcggctgcagcacacagttaagcatcacggacacgcccaccttgacagactccggtgct
ttgtccctggtctcggtgaaagtgaccacctcggcatcgtgtggctgcgcagccagagaa
atgacccaccggccctgcgcctcctaccccaccaacccctgtctcaacggggggacgtgc
atcgacacacagaatggctacaggtgctactgccccccacagcttgaggggcccagttgt
cagcagacgatacttggtttccttggcaacggctacgcctggtttcctcccataaggcca
tgctttgatagccatctttcactggagtttatgacagaggaagacgacgggctgctcctg
tacgccggcccgctggccactcttctgcctggggagggcgaggactacatggcgatagag
ctcatcggtggaacgccgagccttaaagtcaaccacggctctgggacgctggtcctgcag
ttgatcaataacgtcggagtggccgacagacgctggcaccgcctggatgtgaggagcaac
agcaaagaagtgcgcttcactctggatcgatgctccactgccatcgtcatggaaaccgaa
ggcgtggactcctgggcaatgacagaggaccgctcatcctgtgaaatccgtggcgtcact
cctaacagggacaagtacctgaatggaagtcacgtgctgcagctcggaggagtcagcgag
aacatctcatatgaatacccacagctgcagttcaagcactttaatggatgtataaggaac
ctgcttgtggacagcaagctgtatgaccttggttcccccgccgaatcctacaacacgtcg
ccgggctgcagtcttattgatgaccactgcaccaacgtggggcagctccccccctgtggg
aagaggggccgctgtcacggggagcggggctccttcagctgcctttgtgaaacaggcttt
tcgggctcacggtgtgatcaagcggctgcagagttctccttcgacggtcggagtcacgtt
caggtccagctcttctggtctccccctgcaaggcagacttttgtgcagattggagttcga
acgcgcgccgccagcggcgtcatcctcagcctgatgtcgcaggagcaaagcgaatacata
tgtttagaggttgttcggggcctgctggctgttttctacaacctcggcgacggagaccac
aacatgacgctgccccaccttcgcctgaacgatggggagtggcaccaggtggagctggac
cgctttgggcgggagttcacgctcaggttggacggaggcggggggcagcaagagatcacg
gcctcgcctggacaaagtcaggagatcctgattgaccacaccatggtgatgctgggaaac
tcctttccctcgggacacaaccgcagctttgtcggctgcctgcgagacgtgaggctgaac
ggccaccccctccctctggagaaggagaagccgtcaaagggacttcaggtggtttcctcg
cagggcgtctccgtgggctgctcctccgatgcctgtcggaagcagcactgcgcccccccc
ctggtctgcgtggatctgtggagacaccaggagtgcaggtgccccccgggtcacatgacc
agggagagcccctcgggtaaagtgtgcatttacacgctgtgcgccagccggccgtgtcgc
cacggcacctgcgtggctcactccccgtcgcggtactcctgcctctgcagcgacggctac
agggggcggcactgcgaggtggcgctggccgttttccacgacgacgacagcctgagcctc
agctccatgttcgccatcagcatctgcgtcatggccttcctagtgttgatgctggggctg
tttctctactcctgctggaggaaacacaagggcctcaaggagggcgtgtaccacgtgtct
gcacaccacggggagtgggaggacatccgagagaacgtgctgaactatgacgaggagggc
ggaggcgagcaggaccagaacgcctttaacatggtggagctgcagcgctccctccagccc
agtcctgcacagtccctccgctacagctacccccagagcgtcatctcctacccgcagacc
aagcctccccaggagagcagcaagaggggaatgccaaacgggaacggcagcgccgccatc
gccctgcgcctcgccatccctgcctctgagacggagaccttatcgtcccctctaaccttt
cgccgctcccagcgagccttctccttctccagccaggacttggcccggtacctgtgtgag
gtcatcagggacatggagcacccggaggagctcggcaccatgaccacgccgcgccgctcc
tccgggaaggagaaaagcctggcggccgtgcgctccctcagctccctcaatgcgtctcag
ggctccgaagtgaggttccacgcatctcagagcatccgcatggacaggttcaaagccctc
cgagcggtggtgagcgacatgaaaggagactccaagacagctgagggccagaggagtaaa
ctcaaggagagccgggggcagctgaactgtgagaagagcggctga
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integrated database retrieval system