Oryzias latipes (Japanese medaka): 105354904
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Entry
105354904 CDS
T02443
Name
(RefSeq) FERM and PDZ domain-containing protein 1 isoform X1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ola04990
]
105354904
Domain-containing proteins not elsewhere classified [BR:
ola04990
]
Other domain-containing proteins
FERM domain-containing proteins
105354904
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FERM_M
RA_2
FERM_C_FAK1
PDZ
PDZ_6
FERM_f0
T15H9-4_C
Motif
Other DBs
NCBI-GeneID:
105354904
NCBI-ProteinID:
XP_011478516
UniProt:
A0A3B3IC50
LinkDB
All DBs
Position
10:complement(15833528..15857972)
Genome browser
AA seq
1705 aa
AA seq
DB search
MEEKERCRSRSPARRASRVQQVVGTIIRRTRESLSRERLLGDGRSQRSNSLSNQNFQAKL
TLQITKDPVLDRSTGHGFTLTTREPLLVRDIAAGSPADGILYPGDQVLQINDKVLEDLIP
EQVENIMRDLEDCINVTILRHMTNPKSSIMSAEKRARLRNNPVKVRFAEEIVVNGHTQGN
SLLFLPNVLKVYLENGQTKAFKFDNTTTVKDIVLTLKDKLSIRAIEYFALVLEQQYSITK
LLLLHEDELINKVVQKKDSHDYRCLFRVCFIPKDPMDLLQDDPSTLEYLFLQSVGDVLQE
RFIEEMMCGMALRLAALHMHERLASCGQTRMSIKSITKEFGLESFVCPTLLSNLKRKDLR
IALSYHLKKIQSLLEPRQKIISATQARLAYITQLGELISYGGRSYSATMMLQDKEVSVNL
LVGAKYGMSQVINHKLNVISTLVEFSNISRVELLSESEKVSLLRISLHDMKPFALLMDSL
AAKDLGCLLGGYCKLLVDPNVNVFRMGRPKVRVHRIPAEEGVCGRFTVVGGVCYESLSSY
VSRLCSDSDDSTDEDDPMDSQNYKSPDPASQDWEERRREEEEKRREEDRKEREEYKGNPE
VKIMVTAEGKGNESEEEGGATGSALCKVNNTDEEMSLETSWYHTDPRVTSSFSSLSSGSL
SAALDENTATAKPTGEDHLSLNVHHPYLLEPKRHQGLTRPTNLNYHSNDNSFLCFTELSK
ADSLSSPTGITSDDDIDEDEEEDEEREIERVEVLRRISKIPSSRDLRMIDTTPFVRSSIK
KTKRTPPKVPVRTSSIPRNKPCQADGLMSKDEEGLFLTPSPNPKSALLLRDNVSDSEDEF
FDAQERFTPTVPDLSDAELADRQNANRLSGIWNGLSSVQEKESLSPLAKEDQSSKTKKSS
EAVIGPANKFNQQPSPSKPPQKVDVKVKPPLAPKPQLPPKPQLVPSKLSQHGRSYSQCNG
DASGHLSAEPVEMEPETMEFKSVTTGGLPLPASVITAVRCSKQPLSVKTSQTEKNTPKDV
SNHSKDLIYKNGSFFTSKEKHSCIPDETETLKCEKVSNGTDRLSKKQQNQSLSISSVKQT
GPPPVPPKPTSPISLHPLSLPASSPVSPTDPDKGSFKDAVSPPNGIHLWSSRNGSSQSGP
RRVSLSHESLSPKTSDASITITTSLTTSNSKGIGGQESKEPGRSGSGSDLRTSSSSLGGR
LPASALRGKIQSLPWYMTRSQEILGTLDYPSTNSINGDTSGFGSGLSVASGLSDLNKTPV
KDKETVSLKSEYKGSILDDGAEVVIATIKEAQEVTYHMNKTNRSNVSKPNLSFRENCTDS
CSISSEQPQSWCNSAVGFGGVSSMELGGDSPTSSAADTTPPQQHRDTCGCRTVYTNCFSV
DSEDGVSFDEELTVYEFSRRIHTKPVQPIPAPSPQVPPKPNILSLLKDNPRPLSTFSTAS
SELSPLVSCPVSPTTSLGGSLRSLTKKNYAGLKGGFASLHQDIEQLLLVLERGAPEHPHQ
HLKSERTFLKGGPDLNHNATEDSAIPGPNLCCTGERSAIMTEAERSLLQAEARRLASGCQ
RATRVGWAPDEALRSLSNSFSALVQLSAACLRTNPCPGCDFCNKANSTHRDEDSSDQQAM
DKIKEIVGLYQDFVRAVETAGTGTGVGSRNEGLGGSAQAQGDGDGVKLLAKRCTVLISSV
FSLTQLFRTQTPDTTETAGHVPLNF
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaagagcgatgcaggagcaggtctcctgctcggagggccagtcgagtgcag
caggtggtgggaactataatacgacgcacccgagagtccctaagcagagagcggctgcta
ggcgatgggagatcacagcgttccaacagtctatccaatcaaaacttccaggccaagttg
acgctgcagatcacaaaagacccagtcctggacagaagcactggacatggcttcaccctc
accacaagggaacccctgctggtcagggatattgccgctgggagtcctgcagatgggata
ctctacccaggtgaccaagtgctgcagatcaatgataaagtgctcgaggacttgattcca
gagcaagtggagaacatcatgagggacttggaggattgcattaatgtgactatcctgcgg
cacatgacaaatcctaaatcgtccataatgtctgcagagaagagagctcgtctgagaaat
aatccagttaaagtgcgctttgcagaagagatagtggtcaatgggcacactcaggggaat
tctcttctctttctgcccaatgtgctaaaggtctacctggagaacgggcagaccaaagcc
ttcaagtttgataacacaactactgtcaaggatattgttctaactctgaaggataaactg
tctatccgggccattgaatattttgcattggtactggaacaacagtacagcattaccaaa
ctactgctactgcacgaagatgagcttataaataaggtggtgcaaaaaaaagactcccat
gactacagatgcctgttcagagtttgtttcattcccaaagacccaatggacctactacaa
gatgacccctcaacccttgaatatctctttttacagagcgttggagatgtgctacaggag
cgttttatagaagagatgatgtgcggcatggcactccgtctggctgccctgcatatgcat
gaaagactagctagttgtggccagactaggatgtccatcaagagtattacgaaagagttt
ggcctggaaagctttgtctgccctactctactgagcaatttaaagaggaaggacctaagg
atagccctcagctaccacctaaaaaagatccagtccctactagagccacgccagaagata
atatcagcaacacaggctcggctggcctatatcactcagcttggagagctcatttcatat
gggggacgatcttactccgctacaatgatgcttcaagataaagaggtgtcggtcaacttg
ctagtgggagccaagtacggaatgagtcaagtcatcaatcacaaactcaacgtgatctcg
acgctggttgagttcagcaacatcagccgggtggagctgctctccgagtcagaaaaagtc
agcctgctgcgcatatctctacatgatatgaagccatttgccttactgatggactctcta
gcagccaaagacttagggtgtctgctgggaggctactgcaaacttctggtggatccaaat
gttaatgtcttccgtatggggcgcccgaaagtgagggtgcaccggattcctgctgaagaa
ggtgtgtgtgggaggttcaccgtagtaggaggcgtgtgctatgagtccttatcaagttac
gtgtctcgcctctgcagtgactcagatgactccacagatgaggatgacccaatggattct
cagaattataaaagtccggacccagcaagtcaagactgggaggagaggaggagggaagag
gaggaaaagaggagagaggaagataggaaagaaagagaagaatacaaaggcaacccggaa
gttaagataatggtgacagcagaaggtaagggaaacgagagtgaagaagaaggaggagca
acaggaagtgctctgtgtaaagtcaataatacagatgaggagatgagcctggagaccagc
tggtaccacactgaccctcgtgtcaccagcagcttctctagtttatccagtggttcctta
agtgctgctctggatgaaaacactgctacagccaaacccacaggtgaggatcatctgagt
ctgaacgttcatcacccctacctcctggagcctaagcggcatcaagggctcacccgtccc
accaacctgaactaccacagcaatgacaattctttcctctgttttactgagctctccaaa
gctgattctttgtcaagtccaactggaattacaagtgatgatgatattgatgaggatgag
gaagaggatgaagagagggagattgaaagagtcgaagtgctcaggcgtatttccaagatt
ccaagttcaagagatttaaggatgatcgataccacaccttttgtaagatcatctattaaa
aaaacaaaaaggactcctcccaaagtcccagtaaggacgagttcaatcccaagaaacaaa
ccatgtcaagctgatggattgatgtccaaggatgaagagggactttttctgacaccttca
cccaaccctaaatcagcgcttctgctaagagacaatgtctcagattctgaggatgagttt
ttcgatgctcaggagagatttacacctacagttcctgatctatcagatgctgagttggcc
gacaggcaaaatgctaatcgtttgagtggaatctggaatggtctgtcttcggtccaagag
aaagagtcattatccccacttgccaaagaagaccagtcctctaaaaccaagaagagttca
gaggcagtgataggccccgcaaataaattcaaccaacaacccagtccttcaaaaccacca
caaaaagttgatgtcaaagtcaaaccaccacttgctccaaagccccagctgcctccaaaa
ccccaattggttccttccaaattgtcccagcatggacgatcatattcccaatgtaatggg
gatgcctctggacatctatctgctgagcctgtggaaatggaaccagaaaccatggagttc
aaatctgtcaccacaggtgggttgcctttgccagcatctgtgatcactgcagtgcgttgt
agcaagcagccattgtcagtcaaaacatcacaaactgagaaaaacactccaaaagacgtc
tcaaaccacagtaaggatctaatatataagaatggatctttttttacttccaaagaaaag
cattcatgcattcctgatgaaacagaaactctcaaatgtgagaaggtgagcaatggtact
gataggttatcgaaaaaacaacagaaccagtccctgtccatttcctctgtaaagcaaact
ggtcctcctccagttcctcctaaacccacatctcccatcagtcttcacccattatcacta
ccggccagctctccagtttccccaactgatccagacaaagggtcttttaaggatgcagta
agtccaccaaatggaattcacctatggagtagtcgcaatggtagcagtcagtcagggcca
aggagggtgtctttgagtcatgagagcctatcacccaaaacttcagatgcatcaatcacc
attaccacctcattgaccacttccaactccaaaggcataggtggccaagaaagtaaggaa
cctggaagatctggttctggatctgatctaagaactagctcctcaagtcttggaggtaga
ctaccagcatcggctctgagagggaagatccagtctctgccctggtacatgacacgctca
caggaaattctagggactctagattatccctccacaaactccatcaatggagacacatct
ggctttggctccggtttatctgttgcaagtggtttatcagatttaaacaagacccctgtc
aaagacaaagaaactgtttccttaaaatcagaatacaaagggagcattttggatgacgga
gctgaggttgtcattgcaaccatcaaagaagcccaggaagtgacttaccatatgaataag
actaataggtcaaatgtatcaaagcctaatctcagttttagagaaaattgtacagatagc
tgcagcatctcatcagaacaacctcagtcatggtgtaattcagctgtgggctttggaggt
gtatctagtatggagcttggcggtgactctccaacatcctcggcagcagacaccactcct
ccacagcaacaccgtgatacctgtggctgtcgcaccgtttacacaaattgcttcagcgta
gactctgaagacggtgttagctttgatgaagagctcactgtttatgaattctccagacgc
atacatacaaaacccgtccaacccatacctgccccttctccacaagtacctccaaaacct
aacattttgtcactgttaaaggacaacccccgtcctttatctactttttccactgcctcg
tctgagctaagtcctctggtgtcatgtcctgtttcaccaacaacttcgcttggtggttcc
cttcgttcccttaccaaaaagaactatgctgggttgaagggaggctttgcttctctacat
caagatatagagcaactacttctggtactagagaggggagcaccagagcatccacatcag
catttaaaatcagagaggacgttcttaaaaggagggccagaccttaatcacaatgcaact
gaagacagtgctatacctggtccaaacctgtgttgtactggggaaagatctgccatcatg
acagaggctgagaggagtcttctccaggcagaagctcgacgtctggcatctgggtgtcag
cgggccacacgtgttggctgggcacctgatgaggcactacgttcattatccaatagcttt
agtgctctggttcagctgtcagcagcctgcctgcgaacaaatccctgccctggttgtgac
ttctgcaacaaagcaaactcaacgcaccgggatgaggatagcagtgaccagcaggctatg
gacaagataaaagaaattgtgggtctgtaccaggactttgtcagggctgttgagacagct
ggaactggtactggagttggtagtagaaatgaggggcttggtgggtctgcacaggctcaa
ggggacggcgatggcgtgaagctcctcgccaagcgctgtactgtgctcatctcatcagta
ttctcactcacacaactcttccggacacaaaccccagacaccacagagacagcaggccat
gttcctctcaacttttga
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integrated database retrieval system
