Oryzias latipes (Japanese medaka): 105355091 Help Entry 105355091         CDS       T02443                                  Symbol col1a2 Name (RefSeq) collagen alpha-2(I) chain   KO K06236   collagen type I alpha Organism ola  Oryzias latipes (Japanese medaka) Pathway ola04510   Focal adhesion ola04512   ECM-receptor interaction ola04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ola00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     105355091 (col1a2)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     105355091 (col1a2)   09142 Cell motility    04820 Cytoskeleton in muscle cells     105355091 (col1a2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ola00536]     105355091 (col1a2) Glycosaminoglycan binding proteins [BR:ola00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    105355091 (col1a2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  105355091 NCBI-ProteinID:  XP_023815576 LinkDB All DBs Position 11:10346104..10362823 Genome browser AA seq 1356 aa AA seqDB search MLSFVDTRILLLLAVTSYLTSCQLTGPRGDKGPRGDRGPPGPDGKDGKPGFPGPPGPPGP PGPSGLGGNFAAQYDGAKAPDPGPGPMGLAGPRGPPGLPGPPGPQGHTGHAGEPGEPGQA GAVGPRGPPGPPGKAGDDGNNGRPGKPGDRGAPGPQGARGFPGTPGLPGMKGHRGYTGLD GRKGEPGAAGAKGEPGAHGAAGSPGLAGQRGLAGERGRPGPAGPAGARGADGNVGPAGPA GPMGAAGPPGFPGGPGPKGEVGPIGATGPSGPQGNRGEPGSNGAVGPVGPPGNPGANGLN GAKGAAGTPGPGGAPGFAGARGGPGPQGPQGAAGPRGLSGDPGPQGTKGDTGPKGEPGNA GPQGAPGPQGEEGKRGPTGEIGATGAAGNRGARGAPGSRGLPGSEGRTGPIGMPGARGST GSAGPRGPPGDAGRAGEPGPAGLRGLPGSPGSSGPPGKEGAAGPSGQDGRPGPPGPSGPR GQPGNSGFTGPKGPSGEPGKPGERGSTGPTGLRGPPGPDGNNGAAGPVGAVGAPGEKGEQ GPAGAAGFQGLPGPAGPAGEAGKPGERGIPGDQGVSGPAGAKGERGTNGSPGATGPQGPI GPRGPAGAPGADGGKGEPGAAGAAGAQGHQGAGGMPGERGAAGTPGPKGEKGEPGHKGPD GNSGRDGARGMPGPAGPPGPNGANGDKGESGSFGPAGPAGPRGPSGERGEVGPAGPPGFA GPPGADGQPGARGERGPSGGKGETGPSGPAGPAGQSGPSGPSGPAGAPGARGDTGPVGLT GFPGAAGRVGAPGQAGIVGPPGLAGPAGKDGPRGLRGDPGPAGPSGEQGMVGPPGVSGEK GSPGEPGPAGAPGPPGTTGPLGLQGFVGLSGARGDRGTPGAAGAVGEPGRAGPPGAAGPR GPPGNIGMPGMSGPQGEAGRDGNPGNDGPPGRPGAAGFKGDRGEPGPAGSMGLGGAPGPA GPTGAPGRPGGRGEAGPAGPTGPAGIAGARGGAGPAGPRGEKGVAGDKGERGMKGLRGHP GLQGMPGPSGPAGDSGPAGPNGLSGPRGPAGPHGPPGKDGRAGAHGTIGAPGARGPPGFS GPAGPAGAPGLPGPPGPAGGGYDVSGGYDEYRADQPTLRAKDYEVDATIKSLNTQIENLL TPEGSRKNPARTCRDIKLGHPEWSSGFYWIDPNQGCINDAIKVFCDFTTRETCIYSHPES IARKNWYRSTENKKHVWFGETINGGTEFAYNDETLSPQSMATQLAFMRLLSNQASQNITY HCKNSIAYMDGESGSLKKAVLLQGSNDVELRADGNSRFIFSVLEDGCTRHTGEWSKTVIE YRTNKPSRLPILDIAPLDIGEADQEFGLDIGPVCFK NT seq 4071 nt NT seq  +upstreamnt  +downstreamnt atgctcagctttgtggatacccggattctgttgctgcttgcagtaacttcatacctaaca tcatgtcaattgacgggccccagaggagacaaaggacctcgaggtgacaggggtcctcca ggcccagacggaaaagacggcaaacccggattccctggccctcctggcccccctggaccc cctggaccttctggacttggaggaaactttgctgctcagtacgatggcgcaaaagcccct gatcccggccctggacccatgggcttggctggtcccagaggacccccaggacttcctgga ccccctgggcctcagggacacacaggacacgctggtgagcctggagagcccggacaagct ggtgctgttgggccccgtggcccccctggaccccctggcaaagctggagatgatggtaac aatggtagacctggcaagcctggagacagaggagcccctggcccccagggagctcgtgga ttccccggaacccctggacttccaggaatgaagggacacagaggttacactggtctggat ggccgtaaaggagaacctggtgctgctggtgctaaaggtgaacccggtgcccacggagct gctggaagtcccggcttggctggacaacgcggtctggctggtgagaggggtcgtcccggt cctgctgggcctgctggtgctcgtggtgctgacggcaatgttggacctgctggtcccgct ggtcccatgggtgctgccggtcctccagggttccctggtggtcctggccctaagggagag gttggacctattggtgcaactggcccatctggacctcagggcaacagaggagagcctggg tctaatggtgctgttggacctgtcggcccccctggtaaccctggtgccaatggcttgaat ggagctaagggagctgctggtacccccggccctggtggagctcctggctttgctggtgca agaggaggacctggacctcagggacctcagggtgctgctggaccaagaggcctctctgga gatcctggtcctcagggtactaagggagacactggtcccaaaggagagcctggtaacgct ggacctcagggagccccaggacctcaaggggaggaaggcaagagaggaccaactggtgag attggtgcaactggagctgctggcaaccgtggagcaagaggggctcctggaagccgtggt ctgcctggatctgaaggaagaactggccccattgggatgcctggcgctcgtggttccact ggttctgctggaccacgtgggccccctggagatgctggtcgtgctggtgagcctggccca gctggtctcaggggtctcccaggaagccctggaagctctggtcctccaggaaaggaggga gctgctggtccttctggacaagatggccgccctggacctccaggcccatcgggaccaaga ggccagcctggaaactctggtttcactggacccaagggaccatctggagagcccggcaaa cctggagagaggggatccaccggtcctactggactgagaggacctcctggacctgatggc aacaatggagctgctggtcccgttggagctgttggtgcccctggtgagaagggagaacag ggacccgctggagctgctggtttccagggtctgcctggacctgctggaccagctggagag gcaggcaagcctggagaaagaggtatcccaggagatcagggagtctctggacctgctggt gccaagggagagcgtggcaccaatggcagtccaggagctactggccctcagggaccaata ggacctcgtggccctgctggagcccctggagctgatggtggcaagggagagcctggtgct gccggagctgctggtgctcaaggacaccagggagctggaggcatgcctggtgagcgtgga gcagctggtacccccggacctaaaggagaaaagggagaacctggacacaaaggccctgat ggaaattctggcagagatggagctcgcggtatgcctggacccgctggacctcctggacca aatggagccaatggtgataagggtgagagtggttcttttggacctgctggccctgcggga ccccgtggaccatctggagagcgtggtgaggtcggacctgctggacctcccggatttgcc ggaccccctggtgctgatggtcagcctggagcaagaggagagcgtggaccttctggagga aagggagaaactggcccctctggccctgctggacccgctggacagtctggaccttctggt ccttctggccccgctggagcccctggtgctcgtggagacaccggtcctgttggtctcact ggcttccctggtgctgctggtagagttggtgctcctggtcaggcgggtatagtcggacca ccaggccttgctggtccagctggtaaggatggccctcgtggtctccgtggtgaccctggt cctgctggtccatctggtgagcaaggaatggtaggaccacctggtgtatctggagaaaaa ggatcccctggagagcccggccccgctggagctcctggccctcctggaaccactggtcct cttggacttcagggattcgttggtctatctggtgctagaggagaccgtggtacacctggt gctgctggtgctgtgggagagccaggaagagctggacctcccggtgctgcaggacctcgt ggtcctcctggcaacattggtatgcctggtatgagcggacctcagggagaagcaggacgt gatggtaaccctggtaacgatggaccccctggtcgtcctggtgctgctggattcaaggga gaccgtggagagcctggacccgctggctcaatgggacttggcggcgcccctggacctgct ggacccactggagcccctggcagacctggaggccgtggagaggctggcccagctggtccc actggacctgctgggattgctggagccagaggcggtgctggacctgctggacctcgtggt gagaagggagttgctggagacaagggtgagagaggcatgaagggtctgcgtggacatcct ggtctccagggaatgcctggaccatctggacctgctggtgactctggacctgctggacca aatggactttctggacccagaggacctgctggaccacatggacctcctggcaaagatggc agagctggtgcccatggtactattggtgctcctggtgctcgtggacctcctggattcagt ggaccagctggtcctgctggagctcctggtctccctggaccacctggccctgctggcggt ggatacgatgtctctggcggatacgatgagtacagagctgatcagcccactttgagagcc aaggattacgaggttgatgccaccatcaagtcactcaacacccagatcgagaacctgctt acccctgagggatcaaggaaaaatccagcccgcacctgtcgtgacatcaagctcggccat cctgaatggagcagcggattttactggatcgaccccaaccagggctgcataaatgatgcc atcaaggtcttctgcgacttcaccacccgcgagacctgcatctattcccaccctgagagc atcgcccgcaagaactggtacagaagcacagagaacaagaaacatgtctggtttggagag accatcaacggtggtactgagtttgcctacaatgacgagaccctgagcccccagagcatg gccacccagctggctttcatgcgcctgctttccaatcaggccagtcagaacatcacctac cactgcaagaacagcattgcctacatggatggtgaaagcggcagcctgaagaaggctgtg ttgctccaaggttccaacgacgtggagctcagagctgacggcaacagccgcttcatcttc tccgtgctggaggacggctgcactagacacactggtgaatggagcaagacagttattgag tacagaacaaataaaccatctcgcctccccatcctcgacattgcacctttggacattggt gaagccgaccaggagtttggtttggacattggcccagtctgtttcaaatga

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