Oryzias latipes (Japanese medaka): 105355198
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Entry
105355198 CDS
T02443
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3 isoform X1
KO
K06247
laminin, gamma 3
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04510
Focal adhesion
ola04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105355198 (lamc3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105355198 (lamc3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
Motif
Other DBs
NCBI-GeneID:
105355198
NCBI-ProteinID:
XP_011479827
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All DBs
Position
12:7035473..7187302
Genome browser
AA seq
1645 aa
AA seq
DB search
MIGFIGMDALYVVNPSLLTLVLSLHLHFYLLVGAAMDSCYDEGGIPSHCMPKFENIAFNR
TVEASNVCGSTPEDYCMQTGSTRSCHYCDASDPELSHNASLLTDFHRNEEPTWWQSQSMF
YGIQYPKSVNLTLHLGKAFEITYIRLKFYTSRPESFAIYKRTEEGGPWLPYQYYSASCKK
TYGKDAKGFIRPGEEEKTALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSLFLQEWV
TATDLLISLDRLNTFGDEFFKDAKVLRSYFYAISDFSVGGRCKCNGHASECVEGERGDLV
CACQHHTVGADCQKCHPFYQDRPWARATGDSANECLKCNCNGRSDQCIFDMEQYRSTGSG
GRCVDCRDNTDGAHCEHCKANHYRVAPEDPCLACNCNINGSVSLQCNAEGRCVCRPGVTG
AKCNMCQDGFHSLGPSGCRPCECHHSGSVGECSPLDGQCFCKRNVEGHRCGRCKPGFFNL
QLQNPAGCQPCFCFGHSLACSSSNHYTPVNITSDFIEDQDRWVGEFFGGEEYILQWKEGE
VYLLPLTEEDSGFYKAPDKFLGHQIYSYGQPLHITFTSETYDLLPNSLTVILEGSGMTLS
ADLYPKPILHPDPSNSPMQHFIVRLHEYETSFKPRLSAFELQHLLYNLTALKISNAGGHN
YTSQLARVTLASASISSRPLSLPAAWVEQCSCPLGFSGQFCEGCAPGFTRQEPGGGPLSA
CVPCKCHQHGICDPETGVCECSHFTTGMTCEHCLPGYYGNALIGTPGDCQPCPCPDRSSC
VQIAETGQVVCTNCPAGQTGMRCQMCEDGYYGDPMGQSGTVRPCVRCNCNGNVDFNAVGI
CDHFTGQCLKCMGHTEGDHCQRCQRGFYGNALEQTSGQKCKPCSCSSAGTSGHVNECHPQ
TGSCHCLSHVTGRDCSYCEVGFFNLQPGYGCERCKCSPIGSTSQACHPFTGECVCRPGVE
GTLCDSCRLGFFGFSSRGCRACNCDPMGSVSMQCHGNGTCQCRQGFVGYKCDKCEVNYFH
NRANHQCEECPVCYSLVKKQAEKLQTRLQDLEKLLSHFDCRGRLGRQPNLQQYHMAGFYQ
HDQLRGEDSLPNALEDFLAFQEAREAFIKQFSSLEAATGTLSAQLHGLTFTLNCSISVTQ
AEGSDGRKDERHGGVCRTFTVALLMIKASEKLLKQATLDLDNMIFPFETTSTPNKWNLMV
NESQVLMESHREMADLIEAVATRALQASKQTFSLLMDLLRDNSTEEYIRNLTEQIAQMQQ
QKENLTLQLNETAAKQQALLEEDAVLSLTLNNITSSFHQLLLTDGRKSSEGGQTKFNQTS
ESNDTTEWGENLLKKSEELNQEIQTKDGLIGRIREKMEPETLAASENLEKVESIDQLKAQ
AQDLKVVALSSVVTGKEVESETISLYRRLENMVEEWPHLQAQTKAAVKKEKHLKEKVLPD
ARRKASQVKKSLQPAVENASLSNNATKEAKQRVHNVEKESKAILIQAKHTRTASGHLSSH
IDSALKQLSEQESTLKKVKIPPPPEPEVSLTSIKEDVEAAKLQLEAYSTALTELISKIDG
SVPLERFDRILNETARRLSMLRGSVESPALSSKIQKLHAAAKEQKSRLSLIEQDIQEIRE
ERDSLRDIALNLPQSCPQNPGGGKA
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atgattgggtttataggcatggatgcgttatatgtggtgaacccttcactcctgaccctg
gtgctctcacttcatttgcacttttaccttttggttggggccgcgatggactcctgctat
gacgaaggaggtattcccagtcactgcatgcccaagtttgagaacatcgcctttaaccgc
acggtggaggcgtccaacgtctgcggttctacacctgaggactactgcatgcagactggc
tcgacgcgctcgtgtcactactgtgacgcatcagatccagagctgagtcacaacgccagc
ctcctgactgactttcaccggaatgaggagcccacgtggtggcagagtcagtccatgttc
tatggcatccagtaccccaaatccgtcaatctcacccttcaccttgggaaagcttttgag
ataacctacatacgcctgaagttctacaccagtcgacccgagagcttcgccatttacaaa
cgcacagaggagggtggaccttggttaccttaccaatattacagcgcctcttgtaagaag
acttatgggaaggatgccaaaggttttattcgcccaggagaggaggaaaagaccgctttg
tgtactgacgagttcagcgatatttctcccctgactggaggaaacgtggctttctccacc
ttggaaggtcgacccagcgcatacaactttgaccaaagcctgtttttgcaggaatgggtg
acagccactgacctgctcatttctctggaccgcctgaacacttttggagacgagtttttc
aaagatgccaaagttttgcgctcgtacttctacgccatctcggatttctctgtgggaggc
aggtgcaagtgtaacggtcatgccagtgagtgcgttgagggggaacgtggtgacttggtt
tgtgcctgccagcatcacaccgtgggagctgactgccagaaatgtcaccccttttaccag
gacagaccctgggccagggccaccggagactccgccaacgagtgtttgaagtgcaactgc
aacgggagatcagatcagtgcatctttgacatggagcaatacaggagcactggcagtggg
ggacgctgtgtggactgcagagacaacacagatggggcccactgtgagcactgcaaagca
aaccactacagggttgcaccagaagacccatgcctggcctgcaactgcaacatcaacggc
tcagtgagtctacagtgcaatgcagagggaaggtgtgtctgccgtcctggtgtgacgggg
gccaagtgtaacatgtgtcaggatggattccactctcttggccccagtggctgcaggcca
tgtgagtgccaccacagcgggagtgttggcgagtgctctccactggacgggcaatgtttc
tgtaagcgaaatgtggagggacaccgctgtggccgatgcaagccaggattttttaatttg
cagctccaaaacccagcgggctgtcagccgtgtttctgttttggccactcactggcatgc
tcctcatccaatcactacactcctgtcaacatcacttctgatttcattgaagatcaggac
cgctgggtgggggagttctttggcggcgaggagtatatcctgcagtggaaggagggtgaa
gtctacctgctgcctctcacagaggaggacagtggcttctacaaagctcctgataaattt
ctgggtcaccaaatctacagctatggtcagcctctccacatcaccttcacgtctgagacc
tatgatctcctccccaacagcctcacagttattctcgaaggctccggaatgaccctgtcg
gctgatctttaccccaaaccaattctccatcctgaccccagcaactccccgatgcagcat
tttattgtcagacttcatgaatatgagacgagcttcaaacctcgtctgtctgcctttgag
ctccagcatctcctctacaacctgacagctctgaaaatcagcaatgctgggggacacaac
tatacgtcacagcttgccagggtaaccctcgcctccgcttccatctcttcccgtccactg
agtctccccgctgcgtgggtggaacaatgttcctgcccgctgggcttctctggtcagttc
tgtgagggatgtgctccaggattcacccgacaagaacctggcggagggcctctttcagca
tgcgtgccctgcaaatgccaccagcatggaatctgtgatccagagacgggtgtgtgcgag
tgctcccacttcactacggggatgacctgtgagcactgcctgccaggctactatggcaac
gccctgattggcacacctggtgattgtcagccttgcccttgtccggaccgcagcagctgt
gtccaaattgcggagacgggacaggtggtgtgcaccaactgccctgcaggacagacaggg
atgcgctgtcagatgtgcgaagacggttactatggtgaccccatgggacaatctgggacg
gttcgaccatgtgtgaggtgcaactgcaacggcaatgtggacttcaatgcagtgggaata
tgcgaccacttcactgggcagtgtcttaagtgcatggggcacacagagggcgaccactgc
cagcgctgccagcggggtttctatggcaacgccctggagcaaacatctggccagaagtgc
aagccatgcagctgcagctctgctggaacctctgggcatgtaaatgaatgccatcctcag
acaggaagctgtcattgcctcagtcacgtgaccggccgggactgcagttattgtgaagtt
ggcttcttcaaccttcagccgggctatggatgtgagaggtgcaaatgcagtccaattggc
tccacttcacaggcttgccatccattcacaggtgagtgtgtgtgccgcccaggagtggag
gggacgctgtgcgattcttgtcgtctgggattctttggattctcatcacgaggttgtaga
gcttgcaactgtgacccaatgggctccgtttccatgcagtgccacggtaacggtacctgc
cagtgtcggcaaggctttgtgggttacaagtgtgacaaatgcgaggtgaattatttccac
aatagggccaatcaccaatgcgaagaatgtccagtgtgctacagcctcgtcaagaaacag
gctgagaaacttcagactcgcctgcaggatttggagaagctcctttctcactttgattgt
cgaggtagactcggaaggcagccaaacctgcagcagtatcacatggctgggttttaccag
catgaccagctccggggggaggattctcttcctaacgctctggaggattttctggccttc
caagaggcacgggaggccttcataaaacaattttcctcgctggaagcagctacaggcaca
ctttcagcacagctgcatggccttacattcactttgaactgcagcatcagcgtgacacag
gctgagggaagtgatgggaggaaggatgaaaggcacggaggagtgtgtcgcacctttacg
gtcgctctgctcatgatcaaagcttctgagaagctgctgaagcaggccactctagacctg
gacaacatgatctttccttttgagacaacgtcaacgcctaacaaatggaacctgatggtc
aatgagtcacaggtgcttatggaaagccacagagaaatggcggaccttattgaggccgtg
gccaccagggcgctacaagcctcaaagcagaccttcagtctcctgatggatctactgcgg
gacaactccacagaggagtacatcaggaatctaacggagcagattgcacagatgcagcag
cagaaggagaacttaactctgcagctgaatgaaacggcagccaaacagcaggccctgctg
gaggaagatgctgttttaagcctcaccctcaacaacatcacatcatcctttcatcagctg
cttctgactgatggcagaaaatcttcagagggcggccaaacaaagttcaaccaaacaagt
gaaagcaacgacaccactgagtggggggaaaaccttctcaaaaaatcagaggagctcaac
caggaaattcagaccaaagacggcctcatcgggaggatcagggagaagatggagcctgag
acactcgcagccagtgagaacttggagaaagtggagagcatcgatcagctaaaggctcaa
gctcaagatttaaaggtcgtagcgttatcctcggttgtgacgggaaaggaggtggaatca
gaaaccatcagcttgtacagacgtctggaaaacatggtggaggagtggccccacctgcag
gcccagaccaaagctgcagtgaagaaggaaaaacacctgaaagagaaagtcctccctgat
gcccgaaggaaggcatcgcaggttaagaagagcctacagccggctgtggaaaacgccagc
ctgtcaaacaatgctaccaaggaggcaaagcaaagagttcataatgttgaaaaggagtcc
aaagcaattctgatccaagccaagcataccaggactgcatcaggtcacctcagctctcac
atagactctgctttaaagcagctgtctgagcaggagtctacactgaagaaggtgaagatc
ccgccgccccctgagcctgaggtgtccctgaccagcataaaggaggatgtggaggcagcc
aaactccagctggaggcttactctactgcactcactgagctaatcagcaagattgatggg
agcgtgccactggagcggtttgatcggatcttaaacgagacagcacgccgcctgagcatg
ctgcgcgggagtgtggagagcccggcgctgagctcaaagatccagaagctgcacgcggct
gctaaggagcagaagagccgcctgtccctcatcgagcaggacatccaggagatcagagag
gagagggacagcctcagagacatcgccctaaatctgccccagtcctgcccccagaatcca
ggaggaggtaaagcctaa
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integrated database retrieval system
