Oryzias latipes (Japanese medaka): 105355657
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Entry
105355657 CDS
T02443
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105355657 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ola01009
]
105355657 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
105355657 (ncor1)
Protein phosphatases and associated proteins [BR:
ola01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105355657 (ncor1)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
105355657 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
105355657
NCBI-ProteinID:
XP_011482075
LinkDB
All DBs
Position
14:complement(21570531..21642884)
Genome browser
AA seq
2385 aa
AA seq
DB search
MSSSSGYPPSQGSFSSEQSRYPPHSVQYTLTGSRHQQEFAVQDYRTHMQDPQGRRRLSLL
SEFHPGIERPPERRHGYEPQFHSISAQSEHEALEAKRPRMELVPEPHISRTPPTSGGLGP
PMTHSGQDSLRATVEVKKESQYIVKVESPAAGGPTLHMGEEQDNSPSKLSKEELIQSMDR
VDREIAKVEQQISKLKKKQQQLEEEAAKPVEPEKPVTPPPVEHKHRSIVQIIYDENRKKA
EEAHKILVNLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKI
CQRYDQLMEAWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGT
GLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLMDDP
MKVYKARQFMNVWTEHEKEIFKEKFVQHPKNFGLIATYLERKSVADCVLFYYLTKKNQNY
KTLVRRNYGRRRGRNQQITRPSQEDKTEDKNEEEKSEKLEKKEDEEKKDEEEKDEKEDSR
DIGKDKDKCDGGEDEDGKEQNTPRGRKTANSQGRRKGRITTRSMANEAASVAAEEAPPPA
LEPAVADPPQLSKSDPAQKGPKEANKPGTPVASVDTKAGAGETGETSRWTEEEMEVAKKG
LVEHGRNWIAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDSRRARADRSQGEGQ
AMASPDDDEDNADESEGGDNSSDTESAPSPSQADSSKTADSKREESTTGDSQSTDSDRAQ
ASDGKATEPPYGELRVKQEKSPEREMGSQEEKTRAAAFPGPVHPKTEPQDVDMKAGEVQV
KTEPEVKEKVEKGEHGERQRDLHSDNDSSATCSADEEVEAEPDRQRMYTMEKPMLRSPPG
TVLVPSPKQAHFSMQQMQHRAANIPPMVPGPYGPGGVSITGFAMFQHQIKAVHDSAHQEE
KQRQDLGDLERRPPYSTRSPTVMDRDGKPLPYGPYDMMLALDQERLSGQPGSPYRLPPRE
LRKYSPQHDMNITNASCYSVSPVLHPAPNQLAQNMNEGVRVSFPRHSLPPNIPSPPPLIP
TTKPTDKPSFIQGGSISQGTPGTYLPSHAVYGPEGTKSSVGSISLGLPRQLDPHKPGNAV
SSLQDSRGSSAKGNEGLAFRGSITKGTPALPQSNVAADLLKGTLTKLTPEDLSSPDKTRG
EQMAKGHVIYEGKSGHILSYDAIKNPRENTRSPRIGHDLKRSHEMMESSVGRGHSSREGT
PLEGLISRALPREGLHGDSKERPLATGSIMHGTPRTAADSYDDAMKYGKQMRTESPPVRS
FEGSIGKGKPYEGVNTIKEMGRSIHEIPRQDQSAQDMCKTPDLADRRVMEGSIPQIHPLG
QPAIKHNVKSLITSPNKMTHAMPQLEAMDRAKYEESKAVRHTSVVNSTASVLRSTHQEAG
KAQHSPSMYEDSSARRTPVNYSNNPVSRGSPMLRCPDGGMSSAKSAAHDRKSAMTPTQRD
SVPAKSPGSGGDPVASHSPFDPHHRPVVPGEVYRAHLLPHLDPSLAFHRGLDPAFMFPRQ
PSPTGYHNTYQLYAMENTRQTILSDYITSQQMQVIPRPDMARGLSPREQAVSVPYPANAR
GNIDLAQMPPTILLPHPGGTGAPNLERTAYLTGAQPPFPPRAFNPTSISPGHPAHLASSA
ERERERELQEKEREKEQREHRERERERDLRERERERERTSEYMRGSGQEHPVRPGSRGYL
HSPSPSLRTQDVVVQQRPSIFQGKSVITSLMAHPPATTSASQSSSRFSTAADALAALVDA
AASAPQMDVSKVKESRQEPDEEMGTSVAGRRAPSRLEQQQQEAERRSLHSPYSAMSLPGG
KPHPAYSEGPGNGAKDKVPQTKSRIEEELRTHGKTTITAASFIDVIITRQIASDKDSRER
GSQSSDSSSSLSSTRYDNSTGGAIEVISPPSSPVQSQQDKPEDGQQQAAVSMRPYEMSRY
RPSGEPPQPPSSQADSYTQVPKTHRVMTLADHISHIITQDFARNQDPPVSSSASATFQSS
VPPVSSSGRVKGPSRYSPENQVAASLHQRPASRVSPENPPDKPRARPGKSPERGGRQMES
YEPISPPQGYQGMDKLEGGGPSAQRREADNSEIRSDSRSPGSVSYLPSFFTKLENTSPMV
KSKKQEIFRKLNTSGVGDSDVGNTQPGTEIFNLPAVTSSSNINPRSQSFSDPASNLGLED
IIRKALMGNLEERQDEHQGGGGPGGLSNTSAADARQEASPSPSMGKQKQSKANSRKSKSP
NLSQTYTGGERPSSVSSVHSEGDYHRPTQPQWSWDDRPSSTGPMQFPCNPLTMRMLSNTP
PTSMASPLIQSQQQQQQQPPPAGSQQRVWQSLLSEQYETLSDSDD
NT seq
7158 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagctcgggctaccccccctcccaggggagtttcagcagcgagcagagccga
tacccaccccactctgtccagtacacgcttacgggctcacgccaccaacaggagtttgcc
gtccaagactatcgtactcacatgcaggatccacaaggtcggagaaggttgtctctactt
tctgaattccaccctgggattgaaaggcctccagagaggcgtcatggttacgagccccag
ttccactccatctcagcccagtctgagcatgaagccttggaggctaaacgccctcgcatg
gagctcgttcctgagccccatatctcacgcacccctcccacttcgggtggccttggaccg
cccatgacacactctggacaggacagtttacgagccactgtggaggtaaaaaaggagtct
cagtacattgtcaaagtggagtcaccagctgcaggtggacccaccctacacatgggtgag
gaacaggacaattctccttccaaactgtccaaggaggagttgatccagagtatggaccgt
gtggacagagagattgctaaagtggagcaacagatttcaaagctaaagaagaagcagcaa
caacttgaggaggaagcggcgaagccagtggagccggagaagcctgtgacccctcccccg
gtggagcacaagcaccgcagcatagtccagatcatctacgatgaaaaccgaaaaaaagca
gaagaagcccataaaattctggtaaaccttggtcccaaagttgaactgccgctgtataac
caaccatcagacacaaaagtgtatcatgacaacatcaagacaaatcaagtaatgagaaaa
aagctgattttgttttttaagagaaggaaccatgcacgtaaacaaagggaacagaagatc
tgccagcgctacgaccagctcatggaagcttgggagaagaaggtggagcgcatggagaac
aatcccagacgcaaagctaaggagagcaggacacgggaatattacgaaagacagttccct
gagatccgcaagcagagggaacagcaggagcgcttccagcgagttggacaaagaggaact
ggtttgtctgcaacaattgcaagaagcgagcatgaaatttcagaaatcatagacggtctc
tccgagcaagagaacaacgagaaacagatgagacagctgtcagtcatccctcccatgatg
tacgactctgagcagaggagggtgaagttcatcaacatgaacggcctaatggatgacccc
atgaaggtgtacaaagcccggcagttcatgaatgtttggacagagcacgaaaaggagatc
tttaaagagaagtttgtacagcaccccaaaaactttggcttgatcgctacatatctggag
agaaagagtgtggctgactgtgtcctgttttactacttgacaaaaaagaaccaaaactat
aagacgctggtgagacgaaactatggaagacggagaggaaggaatcagcaaataacacgt
ccctcacaagaagataagacagaggacaagaacgaagaggaaaaatctgaaaaattggag
aaaaaagaggacgaggaaaagaaggacgaggaagagaaagatgaaaaggaggattccagg
gacattggcaaggacaaggacaagtgtgacggtggggaggacgaggacggaaaggagcaa
aacacaccgcgtggcaggaaaaccgccaacagccagggccgccgtaagggaagaatcacc
acgcgctccatggccaatgaggctgcatcagtggcagctgaggaggcacctccccctgcc
ctggagcccgctgtggcagatcctccacagctctccaagtctgacccagcacagaagggg
cccaaagaggcaaacaaacctgggacaccagtagcttcagtggatactaaagctggtgcc
ggggaaaccggagaaacttctcgctggaccgaggaggagatggaggtcgccaaaaaaggg
ctggttgaacatggcagaaactggattgccatagccaaaatggtgggcacaaaaagtgag
gcacagtgcaaaaacttctatttcaactacaagaggcgtcacaacttggacaaccttctg
cagcagcataaacaggattctcggagggcgcgtgctgatagatctcaaggggaaggccaa
gccatggcatcgcccgatgatgacgaggacaacgcagatgagagcgaaggtggtgacaac
agctcggacacagagagtgccccttctccctcccaggctgactcatcaaaaactgcagac
tctaagagggaggagagcaccacaggagattcccagagcaccgacagcgacagggctcaa
gccagcgatggaaaagctacagagcccccgtatggagagctccgtgttaagcaagagaaa
agtccagagagagaaatgggatctcaggaggagaagaccagagcggctgcttttcctggt
ccagtacatcccaaaactgagcctcaggatgtggacatgaaagccggagaggttcaggtc
aagacggagcctgaggtcaaggaaaaggtagaaaaaggagaacacggcgaaaggcagaga
gacctccactctgataatgactcaagtgcaacctgcagtgcagatgaggaggtggaggca
gagccggatagacagagaatgtacaccatggagaaaccaatgctgcgcagccctccaggc
actgtgcttgtgccctcacccaaacaagcccacttcagcatgcagcagatgcagcatcgt
gcagctaacatcccccccatggtgcctggtccctatggccccggtggagtttccatcact
ggttttgcgatgtttcaacaccagatcaaagccgtgcatgactcggcccaccaggaggag
aagcagaggcaggatctgggagacctggagcgcagacctccttacagcacgcggagcccc
actgtaatggacagagatggtaagcccctaccctacgggccttatgacatgatgctggct
ctggaccaggagcgtctctctggtcagccaggctctccctacagactcccccccagggag
ctgaggaagtactcacctcagcatgacatgaacatcaccaatgcttcctgctacagcgtg
tcaccagttctccatcctgctccaaatcagctggcccagaatatgaacgaaggcgtccgc
gtgtcgtttcccaggcacagtctgcctccaaacattccctctcctcctcccctcattcca
accaccaagcccacagataaaccttccttcatccaaggaggctccatctcccagggcact
cctggaacgtatctcccatcccatgctgtctatggtcctgaggggactaagagctctgtg
ggctccatctctctaggtctgcctcgacagctagatccccacaagcctggaaatgcagtt
tcatctctgcaggacagcagaggcagctctgctaaaggcaatgagggcctcgctttcaga
ggatcaatcactaagggcactccagcccttcctcagtccaatgtggctgctgacctcctg
aaggggacactcacaaagctcactccagaggacctgagcagcccagacaagaccaggggg
gagcagatggctaaaggtcatgtgatctatgaaggcaagagtggtcacatcctctcttac
gatgctattaagaatccgagggagaacacccgcagccccagaataggccacgacttaaaa
cgctcccatgagatgatggagagctccgtggggagaggacactccagcagggagggaact
ccccttgaagggttaatcagcagagccttgcccagagaaggtctccatggcgactcaaag
gaacgaccactggctactgggtccataatgcacgggacaccgagaacagccgctgactct
tacgacgatgcaatgaagtatgggaagcagatgaggacagagagcccaccagtgcgctct
tttgaagggtctattggcaaaggcaagccctatgaaggagtcaacaccatcaaagagatg
ggacgctcaattcatgaaatccctcgacaggatcagtctgctcaggacatgtgcaagacc
cctgacctggcagacagaagggtgatggagggctccatacctcagattcaccctctgggc
cagcctgctatcaaacacaatgtcaagtcattaatcactagtcccaacaagatgacccac
gctatgccccagcttgaggcaatggaccgagccaaatatgaggagagtaaggctgtacgg
cacacctctgtggttaactccaccgcatctgtcctgcgctcgacacaccaggaggctggg
aaggctcagcacagtcccagcatgtacgaggactccagtgctcgcaggacccctgtgaac
tacagcaacaatcctgtttccagaggctcgcccatgctacgctgtccagatggtggcatg
agctctgccaaatccgccgcacatgacagaaagagtgccatgaccccaacacaaagggac
agtgtcccggccaagtccccggggtcaggtggagatcctgttgcctctcatagtcccttc
gacccccaccaccggcctgttgttccaggagaagtttacagggcccacttgcttccacac
ctcgacccaagcttggcctttcacagaggactagaccctgcattcatgttccccaggcag
ccgtccccaacaggataccataacacctaccagttgtacgccatggaaaacacgcgtcag
accatcctcagcgattatatcacgtcccagcagatgcaagtcatcccccggccagacatg
gcaagaggattgtcgccaagggaacaggctgtttctgtcccttacccagctaacgctcga
gggaatattgatctagcccagatgcctccaactatcctgttgcctcatcctgggggaaca
ggtgctcccaatttggaacgcaccgcctacctcactggagctcagcctcctttccctcct
agggctttcaacccaacttccatatcaccaggtcatccagcccatctggcctccagtgcc
gagagagaacgtgagagggagctgcaggagaaggagagggagaaagagcagcgggagcac
cgcgagagggagcgggaacgagacttaagagagcgagaaagagaaagggagcgaactagt
gaatatatgcgtggaagtggacaagagcatccagttcgaccaggaagtcgaggttaccta
cactccccatctccctcactcaggacacaagatgtggtggtgcaacagagaccaagtatc
ttccagggaaagagtgtcatcacctctttaatggctcatccacctgcaacaacatcagca
tcccaaagcagctcccgcttcagtaccgcagcagacgctctggctgccttggtggacgca
gccgcttctgcccctcagatggacgtttccaaggtgaaggagagcaggcaagaaccagac
gaggaaatggggacatctgttgctggcaggcgggcacccagccgcttagaacaacagcag
caggaggcagaaaggcgatctctgcactcgccatatagtgccatgtctttgccaggtggc
aaaccccatccagcttactctgagggccccggtaatggggctaaggataaggttcctcag
accaagtcccgcatcgaagaggagctccgaacacacggaaagacgaccattacggctgct
agcttcatcgatgtcatcatcacacgccaaatagcttcagacaaagactcccgtgaacga
ggctcgcagagctcggattcctccagcagcttatcatctactcgatatgacaactcaact
ggaggagccattgaggtgataagccctccaagttctccggtccaatcccagcaggacaaa
ccagaagatgggcaacagcaagcagcagtcagcatgcggccgtatgagatgagccgatac
cggccttcaggagagccccctcagcctccctcctcccaggcagatagctacacccaggtc
cctaaaactcacagagtcatgaccttggctgaccatatttcacacataatcacccaagac
tttgccagaaaccaggacccgccagtctcttcttcagcctctgccacattccagagttca
gttccacctgtgtcatcgtcgggtcgggtcaaggggcctagtcggtacagtcctgagaat
caggtcgctgcttcactccaccaaaggccggcaagcagggtttctccagagaatcccccc
gacaagcccagagcgaggcctgggaaatctccagagagaggaggcaggcagatggagagc
tacgaacccatttctcccccgcagggatatcaaggcatggacaaactggagggaggagga
ccctcagcacaaaggcgagaggctgacaactctgagatcaggagtgactcccggtctcca
gggagtgtcagctacctgccttccttcttcaccaaactagagaatacatcgccaatggtt
aaatccaagaagcaggaaatcttccgtaagttgaacacctctggtgttggtgattctgat
gttggaaatacacaaccaggcacagaaattttcaacttgcctgctgttaccagttccagc
aacataaacccaagaagtcagtccttcagtgacccggccagtaacttgggtctagaggac
atcatccgcaaggctttaatgggcaacttggaggaaaggcaggacgagcaccagggagga
ggggggccagggggcctgagcaacacgtctgctgccgatgcccgccaggaggccagtcca
tcccccagtatggggaagcagaagcagagcaaagcaaacagccgaaaatccaagtcgcct
aacctgagtcagacctatactggaggggagcgtccctcctcagtgtcgtctgtccactct
gaaggtgattatcacagaccaacccaaccccagtggagctgggatgaccgaccatcatcc
acaggtccaatgcagttcccgtgcaatccactgaccatgcgcatgctgagcaacacgcca
cccacctccatggcctcacccttaatccagagtcagcagcaacagcagcaacagccgcct
cctgctggcagccagcagcgggtgtggcagtctctgctgtcagagcaatatgagaccctg
tctgacagcgacgactga
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integrated database retrieval system
