Oryzias latipes (Japanese medaka): 105355814
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Entry
105355814 CDS
T02443
Name
(RefSeq) SMC5-SMC6 complex localization factor protein 2 isoform X1
KO
K26127
SMC5-SMC6 complex localization factor protein 2
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ola03400
]
105355814
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
105355814
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CANIN
CTD1
Motif
Other DBs
NCBI-GeneID:
105355814
NCBI-ProteinID:
XP_023819216
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Position
15:complement(22424694..22439033)
Genome browser
AA seq
1382 aa
AA seq
DB search
MKKASENQDNSSRLSDYSSSRNKVMDLTPQQPPPHHFTAFPQETPMKPSQVPNRLSHPSP
RRVLPLHTPGKERFHPHLHHSGGVAPNNPPNADTPLSTETGPPKDCVEPRGLVPSSLSSS
CSTVSPCYGTERERKGSFQRSSLSESKHHSSSQPVPVTLNNRGLADVPSSGCSQRSSSQC
LHNVKERLSSGQSVKHQETESKFATSASSDTQRRHDPFKRHHHHPRTSSENNIPAPYSSC
SSHKRRRESEHRHNNAKKPCPEGPDSSKTPSISAVSHPVMKNSSLLELSHKKATECAPCT
ERTQHGTNEAGSTGTKEVCSGSTEKKDVKSSSSSKPRDERHRRRSEENPKRNHFGTSDVP
QKVVVRSYRSGSVDSKPAHSKADPRRESSQIDHISPKPTFQSSSGLHGSQAAERHKTSRR
KSAAILDDIDQLFTPDPVVVSSVCKSAKPPTNVETIKCPASEKSSSPAPMCSTPVTSCHK
TVAAESPNATPSAVRNPPFTTDHTFHSDSPACKTTKAKTNAETSKPPCTEKAFNPASSSC
TNVGGSSSQSPSAESSPPNSHLPSDCVITAASSASKTAKAKENDKTKSSTSENGSSPAST
SSTPSNVPASCHKDAHVTAMDKSCTAPSSYNSSICLSPVTIKLVKLEKMNLGFKDQGLRS
VSTMKYKFVTSGDKQTSWLSISAASSPNSTPASFSEKQAPERFKENVSEDDSIDGELDLG
QNFACNLDLTQSSDTSEEENLMSLQEIMEPVPKVLCTPEKRTFSEPSTPGNHNSQSKSLL
PSAIKSGVYRNNLDELMKEMNNNKKAKEVEAQLLSACKDDLFRIPDSEEMEESQEEGIST
EQQEFLQRYSLMSSVIREVPPGEEVFNLERFGCIFNQDALQLRQCLVNPQTAAQKALLWS
SPAQLRLHVNIGLFQEAYDFFLPCPAQVTHFLFKMMSVHNERMVSDKILHILCDIACAAA
YQIAKNGSHRFKVWVPSLADVTLVLMNMGVGFVTLFPFENLQPPFTERDLLDNDFVKPES
PSINKDDIVFHEYNYINVLKYLSYCMGLCPHSYSDNELLLLLTVVEKVSLDTRCILQSSV
DVNALLYKIVNNIKDWDAMLPRICLALTDLTEDHQNMCLLVQLLPDHTRGKELRRHLSLC
MISKLLEGNCRYQPTQNEFQLAELRPYLPRMQPSALLRGLQQNNSEEDLGILDQQAYYLC
YSLLTLANEASNLQVFPPHQKEQLLVLSSELETRVKCDIRESEKCLYRSKLKDLVARIYT
KWQMLLQRTRPLNGKLYDYYIPLEITSSSQDEEEGTVDEEMNEEEQDRLSTDEDEGSTTA
EEEEKIEGLMDEVNDPEPSQTSDNEGDTSKDDTNTVEEAVTSDLQQGSAGNSTPIDSQEE
TH
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcctctgaaaatcaagacaactcttcaagactttcggactattcctcctct
cggaacaaagtgatggacctcacaccccagcagcctcccccacatcatttcacagccttt
ccacaggagactccaatgaagccgtctcaagttcctaacagactttctcatccttcaccc
aggagagtgttgccacttcatacacctggcaaggaaagattccatccacaccttcatcac
tcagggggggttgctccaaataacccacccaacgcagatactcctttgtcaacagagaca
ggtccccctaaggactgtgtagaacctcgtggacttgttcccagcagtttatcaagctct
tgtagcacagtatctccatgctatggaacagaaagggaaagaaagggttctttccaaaga
agttctctgtcagagtctaaacatcattcttcatctcagccagttccagttaccctcaac
aacaggggcttagctgatgtgccctcttctggttgtagccaacgttcatcatctcagtgt
cttcacaacgtaaaagaacgcctctcatccggccaatctgtcaaacaccaagagactgaa
tccaagtttgccacatccgccagtagtgacacacaacgaagacacgacccgttcaagagg
caccaccatcacccacgaacttcaagtgaaaataatattccagcaccatattcaagttgc
tcatctcacaagaggcggagagagtctgagcaccgtcacaataatgccaagaaaccatgt
cctgagggtcctgactccagcaaaacaccaagcatttctgcagtctcccatcctgtgatg
aagaactcttcactcttagaattgtcccacaaaaaagcaacagagtgcgctccctgtaca
gagaggacacaacatgggacaaatgaagcaggatcaacaggaacaaaggaagtgtgttca
ggctccacggagaaaaaggacgtgaagtcaagttcatcttcaaagcctcgggatgaacgt
cacaggagaagaagtgaggaaaatcctaaaagaaatcattttggtacctcagatgttcct
cagaaggtcgtcgttcggtcttatcgttctggttcggtggactccaaacctgctcatagt
aaagctgatccaaggagagaaagcagtcaaattgaccacatcagtcccaaaccaacattt
caatcaagctcaggtttacatggttcccaggctgcagagcgtcataaaaccagtcgaaga
aaatctgcagcaattcttgacgatatagaccagcttttcactcctgacccagtagtagtc
agctctgtttgcaagtctgcaaagcccccgacaaatgttgaaacgatcaaatgtcccgcc
tcagagaaatcctccagccctgcacccatgtgtagcaccccagttaccagctgtcataaa
actgtagctgcagaatctccaaatgcaacaccctctgcagtgcgaaacccgcctttcacc
acagatcacacctttcacagtgacagtcctgcatgcaagactacaaaagctaaaacaaat
gctgaaacaagcaaacccccctgtacagagaaagctttcaatcctgcatccagctcctgt
accaatgttggtggatcctcttcacagtctccatctgcagaatcttcacctcctaattca
catctcccctctgattgtgtgattactgctgcaagctctgctagcaagactgcaaaagct
aaagaaaacgacaaaaccaaatcatccacctcagagaacggctccagtcctgcatcaacc
tctagtaccccttctaatgtaccggcctcctgtcacaaagatgcacacgtgacagcgatg
gacaagtcatgtacagcaccgtcctcatataactcatccatttgcctctcacccgtcaca
ataaaactggtaaaacttgaaaaaatgaatcttggctttaaggatcaaggactccgaagc
gtctccactatgaagtataagtttgttacatctggggacaaacaaacttcttggctctcc
atcagtgcagcatcttcacccaactctactcctgcttcattttcagagaagcaagcacct
gaaaggtttaaagagaacgtcagtgaagatgattctatagatggggagcttgatctgggc
cagaactttgcgtgcaatttggatcttacccagagctctgacaccagcgaggaggagaac
ctgatgtctttgcaggagatcatggagcctgtccccaaggttctctgtaccccagagaag
agaaccttctccgagccaagcacacctggaaatcacaattctcagtcaaaaagtctgctg
ccatctgccataaagtctggcgtctataggaacaatcttgatgaactgatgaaggagatg
aacaacaacaagaaagctaaagaagttgaagcacagcttctgagtgcatgcaaagacgac
ctgttcaggatccctgattctgaggagatggaagaaagccaggaggagggcatctccact
gagcagcaggaattcttgcagcgctactctttaatgtccagtgtaatcagggaagtgcct
ccaggtgaggaggtgttcaacctggagaggttcggctgcatctttaaccaggacgcgctg
cagcttcgccagtgcttggttaacccacagacagcagcacagaaagcacttctttggtca
agtcctgctcaactgcggctacacgtgaatattggactatttcaggaggcttatgatttt
tttctgccctgtcctgctcaggtgacgcatttcctgtttaagatgatgtcagtccacaac
gagaggatggtgtctgacaagattctccacatcctgtgtgacatcgcttgtgctgctgcc
tatcagattgccaaaaatggaagtcatcgctttaaggtgtgggtacccagcttggcagat
gtgactctggtcttgatgaacatgggtgttggctttgttacgcttttcccttttgaaaat
ctgcagccgccattcacagagagagatttgctagacaatgactttgttaaacctgagagt
ccctccataaacaaggatgacatcgttttccatgagtacaactacatcaatgtgttgaag
tacctgtcttactgtatgggcctgtgtcctcactcgtacagcgacaatgaactgcttttg
ctgctgactgtggtggaaaaagtcagcctggacacacgctgcatcctccagtccagtgtg
gacgttaatgccctcctgtataaaattgtcaacaacatcaaggactgggatgccatgctg
cctagaatctgtctggccttaactgatttgacagaagaccaccagaacatgtgtctgctt
gttcagctcctgcctgaccacacacgtggaaaagagctgcgtcgacatctgagcctctgc
atgatttctaagttactggaaggaaactgcagataccaaccgacacagaatgagttccag
cttgctgaattgaggccatatcttccacgaatgcaaccttcagctctacttcgtggctta
cagcaaaacaattcagaggaggacttgggcattttggaccaacaggcttactatttgtgc
tatagccttttgacactggcaaatgaggcctccaatttacaggttttcccaccccatcaa
aaggagcagctgcttgttttgtcatcagagctggaaacgcgagttaaatgtgacatcaga
gaaagtgagaagtgtctttaccgcagcaagctgaaagacctggttgcgaggatttacacc
aaatggcagatgctccttcagaggacgagaccactcaatggtaagctttacgattattat
atacctttagaaatcacaagctccagccaagacgaggaagagggcacagttgatgaagaa
atgaatgaggaggaacaggataggctttcaactgatgaagacgaaggatctacgactgct
gaggaggaagaaaaaatcgaggggttaatggatgaagtaaacgatccagaaccgagtcag
acaagtgacaacgaaggagacaccagcaaggatgacactaacacagttgaagaggcagtg
actagtgacctgcagcaaggcagtgccgggaactcaactccaattgattcacaagaagag
acgcattaa
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