Oryzias latipes (Japanese medaka): 105356222
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Entry
105356222 CDS
T02443
Symbol
cdhr5
Name
(RefSeq) cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
105356222 (cdhr5)
Cell adhesion molecules [BR:
ola04515
]
Cadherins
Cadherin related
105356222 (cdhr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
105356222
NCBI-ProteinID:
XP_023807528
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All DBs
Position
3:3850413..3867578
Genome browser
AA seq
748 aa
AA seq
DB search
MKSQTFQLQCPPTERPAQTGHYAAGYQLVPRLLIFLCTSRVALWTLNMELAWRSKPVDLL
FRCAVCFSVVSVAQKRLCTVPPGPVSIAENNTADVQVVKIISSADVTLAVSVNPENLFYI
KGSILMMKKGLDYESLPSAALVVWVLCSRAGSTTVNESVEVLVENVNDNPPNFAQNHYVL
DVNELLPINSSIGLLQATDVDSEPLYYRLESATDKYFRLESVTSPRILVKSILDYDAVQK
VSLVLHVQDTFNGSASNEPFFTSVASITVQVKDMDNRPPWFQPCQRISFGAAKLCVSSGY
RGRVNLTEKEEGPLVLEPGPVFARDGDRNRSELISYRILRGNEGNIFQIDEETGNISMTK
AADVLGPISLTILASQVTNRDQFAVTQVTIEVMKKSRNPPRFEKERYEGFIYSNSVPESM
VLRDRSTNRPFRVRAQDEDFAAGLNPDVRYEVQYSSYVNVTSDGFVVLKRVVKTESFALQ
LRAVDAVTGEFGTAALSVQVIPAVAIPSPANTGYRPGDMALLGLVMAALLVLSLIVIGFL
VSRLWKGKSSLGNLCQCLQGEEPRAGRRDSLQYTNDGFQNESDRGGVRRWNATPRRSTFP
QPRGRVLPLERRGHCASCGIYSNHVPKGSPVMRPSRRGRGDGDELGVRSILSQQPRREGG
KSVWFKQSDDSSDIEVEIIPDAVGRVEEETEEELEVEMEDVVRDPAAPMRPPEDVPDSER
VQTSEEQNPTEPAEPGSDRGEVGQQEER
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcacaaacatttcagctgcagtgtcctcccacagagcggcccgcacagacgggg
cattatgctgccgggtaccagctggtaccacgactcctcatcttcctctgtacttcacgc
gtggctctgtggactctgaacatggagctggcctggaggagcaaacctgtggaccttctc
ttcagatgtgctgtgtgcttctctgtggtttctgtggctcagaaaagattgtgtacagtg
cctcccggccctgtcagcatcgcagaaaacaacacggctgacgtgcaggtggtgaagatc
atctccagcgctgacgtgactctggcggtctccgtgaacccggagaatctgttctacatc
aaaggcagcatcctgatgatgaagaaaggcctggattatgagtcattgcccagtgcagct
ctggtggtgtgggtgctgtgttccagagcgggatccacaactgtgaatgagtctgtggag
gtcttggtggagaatgtgaacgacaacccacccaacttcgctcagaaccactatgttctg
gatgtgaatgagctcctccccatcaactccagcatcgggctcctgcaggccacagacgtg
gattcagagccgctctactaccgcctggagtctgccacggacaaatacttccgtctggaa
agcgtgacctctcccaggatcctggtgaagagcatcctggactatgatgctgtgcagaag
gtgtccttggtgctgcacgtgcaggacacgttcaacggctcggcctccaacgagcccttc
ttcacctccgtggcctccatcacagtgcaggtgaaggacatggacaaccgccccccctgg
tttcagccctgtcagaggatcagctttggggctgccaaactgtgtgtgagcagcggctac
agagggagggtcaacctgaccgagaaggaggaaggcccgctggttctggaacccggtcca
gtgtttgccagagacggagaccggaaccggagtgagctgatcagctacagaatcctgcga
ggaaacgaagggaacattttccagattgacgaggagacggggaacatctccatgaccaaa
gcggcggatgtgttaggccccatatccctcacaatcctggcgtcccaggtgaccaacaga
gaccagtttgctgtgacacaggtgaccatcgaggtgatgaagaagagcaggaacccacct
cgctttgagaaggagcgttacgaaggattcatctacagtaactctgttcccgagagcatg
gttctccgagaccggagcaccaaccggcccttccgggtccgggctcaggatgaggacttt
gccgccgggctgaatccagatgtgaggtacgaggttcagtacagcagctacgtcaacgtg
acctctgacggctttgtggtcctgaagagagtggtgaagaccgagtccttcgccctccag
ctgcgtgccgtggacgcggtgaccggcgagtttggaacggcggcgctctccgttcaggtc
attcccgctgtagccatcccctcccccgcaaacactggctatcgcccaggcgacatggcg
ctgctgggcctcgtcatggcggctctgctcgtcctttccctcatcgtgattggcttcctg
gtttcccgcttgtggaagggaaagtccagtttgggaaacttgtgtcagtgcctgcagggc
gaggagccccgggccggacgccgagactccctgcagtacaccaatgacggcttccagaac
gagtccgaccgcgggggggtccgccgctggaacgccactcccaggcgcagcacctttccc
cagccccggggccgggtcctacccctggagaggcggggccactgcgcctcctgcggcatc
tacagcaaccacgtccccaaggggagccccgtgatgaggcccagcaggaggggccgagga
gacggggacgagctcggcgtgaggtccatcctgtcccagcagccgcgccgggaggggggg
aagagcgtgtggttcaagcagagcgacgactcctccgacatcgaggtggagatcatcccg
gacgctgtgggccgggtggaggaggagactgaggaggagctggaggtggagatggaggac
gtggtcagagaccctgccgcacccatgaggccccccgaggacgtgcccgacagtgagcgc
gtgcagaccagtgaggagcagaaccccacagaacctgcagaaccgggctcagacaggggg
gaggtggggcagcaggaggagcgctga
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