Oryzias latipes (Japanese medaka): 105356644
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Entry
105356644 CDS
T02443
Symbol
zcchc2
Name
(RefSeq) zinc finger CCHC domain-containing protein 2 isoform X1
KO
K22700
Zinc finger CCHC domain-containing protein 2
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
105356644 (zcchc2)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
105356644
NCBI-ProteinID:
XP_023806071
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Position
20:complement(5929460..5952940)
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AA seq
1107 aa
AA seq
DB search
MLKMKLQMRTGEERGDKTPDDSLDPSKPRLAPTATSSLIFERLQQPPGPRKHATQLDKET
VFEWFGLHSNPAKRIEFMCGLLHMCQPLELRFLGSYLEDLARKDYHVLRDHECRANTLSE
VGMLTNALDPVVRSKLLVFLSLLGSDNRECAGILSRVLNNVDLALFYRNYDYSLPPFRDP
LPQTFYPPYREPEKEPCELSASDTTAEALEQLALLFTMASLHPAFHFHQKEVVRGLLEKT
ELLLEEERRQRQLRINAQTATTELVGQQEEYMPSSVPGLGECTASHVACQNRRPSRWATQ
REAVHIEGIVLSSVSRTGADKEYNFEVKWSDSSSSRVTKTHHELENFLLKLPKDQTTESF
EKSILILLNQGDQYESREVEKNLRERFLSAPPLFKQTRKVCSFFTCDSAHSSKPTCSICH
CQPNNAYHQDCSDASSQEEEPYVQGHKKKTGSRSPCPLSFLNAKGSQVDTRRGGHAVEVN
GPAEWRKKNCSPRGSHEKEQYRESEKRSHAVSKMKSRVQPADREKGGSKGKGGVLVTVGN
LAAARSPQRKGGVSVPDTCGDTSSESYSSPSSPQHRGTESLDSEDDNNKDTDSHSDDGGK
GGAAAVYFTDPAVVDGVHCLSSNNLKPQMQTLCSETDGEFPPLSFINPVSCVLPNGAADS
PIPVVSPPAQSLVPDGKALEAMMVQMSLAPPAVQAPGAVGDPEKREVVLPFGISPFGLHP
PANLGVHPLVQRFKTALPQSPCCPEGAPESSPAASHPPPVRAMRVMSPGPTSYSSPLLSC
QDPVNVSPGLAALPHVDSSPVHARGHGPTLPSGMPSSYSIPLVPSSVLPSVGAPMVPGVA
SSGPALTQSPGPARSHSPSLVHSSTQSDCSSHSSSTAPTTTGSPLTLQQSQPLPPQQQQP
AGCGTCGCHNNCGSRGGSSVSAASGCQAPFYFPSHQMATRHVFSVHPSLFQLTNLCSNSY
LTQPPPSHQANGAATLPPFFATAPPPASPYLQSHSHSDMIGSQVAAVASAAAAAANYNIQ
QQLAPAASFCQRVYQHIYPSPLGMLPLAALAGGGVNKKNGSISCFNCGVSGHYAQDCNQP
SMDSSQQGGFRLKYAGSHVSEALDNAD
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagatgaagctacagatgagaacgggcgaggaaaggggcgacaagacgcctgac
gactctttagatccgtcgaagccccgacttgctcccacggcgacatcttccttgatcttc
gagaggctacaacagccacctggaccccgtaaacacgcaacacaactggacaaagagacc
gttttcgagtggttcggcctacattcaaaccccgctaagcggatcgagttcatgtgcggg
ctgttacatatgtgtcaacccttggaactccgttttctgggatcctatttagaggatctt
gcgaggaaggactaccacgttttaagagatcatgagtgtcgagcgaacaccctgagcgag
gtggggatgctgacaaatgcgttggacccagtggtgcggtccaaactcttggtcttcctc
tcgctacttggctctgacaacagggagtgtgctggaatactctcccgggtactgaacaat
gtagacctggcgttgttctacagaaactatgactattccctccctccgttcagggaccct
ctcccgcagactttctaccctccgtatcgtgagccagagaaggagccctgcgagctttcc
gctagcgacaccacggcggaggctctggagcagctggcgctgctttttaccatggcctcg
cttcacccagccttccatttccaccaaaaggaagttgtccgcgggctgctggagaaaacc
gagctgctgctggaggaggagagacggcagaggcagctcagaataaacgcccagacggcg
accacggagctggtgggtcagcaggaggaatacatgccctcctccgtgccgggtctagga
gagtgtacagcctcccacgttgcttgtcagaaccgacggcccagccggtgggcaacacaa
agagaagcagtgcatattgaagggattgtgctcagtagtgtctctcggaccggagccgac
aaggaatacaactttgaggtgaagtggtctgactcctcctcaagtcgtgtgaccaaaacc
caccatgaactcgagaacttccttcttaagcttccaaaggatcagaccacagagtctttt
gagaagagtattctgatacttctgaaccaaggggaccagtatgagagcagggaggtggag
aaaaacctcagggaacggtttctgtcggctcctccgctctttaaacagaccaggaaggtc
tgcagcttcttcacctgtgactcagctcactcttctaaacctacttgttccatatgccac
tgccagccaaataacgcataccaccaagactgctcagacgcctccagtcaggaggaagag
ccttacgttcagggacacaagaaaaaaaccggatccaggagtccttgtcctctcagcttt
ctcaatgccaaaggttcccaagtggacactcggagggggggccatgctgtggaggttaat
ggtccagcagagtggaggaagaagaactgttcacccagggggagccatgagaaggagcag
tatcgtgaatcagagaagaggagccacgccgtctccaagatgaagagcagagtccagcct
gcagacagggaaaagggcggatcaaagggcaaaggaggcgtcttggttaccgttggtaac
cttgcagcagcacggtcacctcagagaaaagggggcgtgtctgttcctgacacctgcggc
gacacgtcgtcagagagctacagctcaccgtccagcccccagcaccgcggcacagagagc
ctggacagcgaggacgataacaacaaagacacagacagccattcggatgacggcggaaag
ggtggcgctgccgctgtgtacttcacagatccggctgtggtggacggggtccactgtctg
tcttccaacaacctgaagcctcagatgcagaccctctgctctgagaccgacggcgagttc
ccccccctgtccttcataaaccctgtgtcctgtgttcttcccaatggagccgctgactca
ccaatcccagtggtctctcccccagctcagagcctcgttcctgacggaaaggcccttgag
gcaatgatggtgcagatgtctttagcacctccagctgtccaagccccaggtgcagtcgga
gaccccgagaagagggaggtggtgctccccttcggaatctcaccgtttgggctccaccct
ccagccaatctgggggtgcaccccctggtccagaggttcaaaacagccctgcctcaaagc
ccctgctgtcctgagggagcgccagagtccagtcccgcagcctcacacccgcctcccgtc
agagccatgagagtcatgtcccctgggcctacctcctactcctcccccctgctgtcctgc
caggacccggtcaacgtcagcccaggactggctgctctgccacacgtggacagctccccc
gtccatgccagagggcacggcccaaccctgccctctggcatgccttcttcttacagcatc
cccctggtacccagctctgttctgccctccgttggagcccccatggtgccgggagtggcc
tcctccggacctgccctcactcagagcccgggccctgcccgcagccacagcccctccctc
gttcacagctccacacagagtgactgttcctcccacagcagcagcaccgcccccaccacc
actggaagccccctaaccctccagcaaagccaaccactgcccccccagcagcagcagccc
gcaggctgtggaacatgcggctgccacaacaactgcggcagtcgcggcggcagcagcgtg
agcgccgcctccggctgccaggctcctttctactttcctagccaccagatggcgacgcgc
cacgtcttcagcgttcatccatctctcttccagctcaccaacctgtgcagcaacagctac
ctcacccagccccccccttcccaccaggccaacggtgccgccaccctgccgccgtttttt
gccacggctccaccccctgcgtctccctaccttcaatctcacagccactcagacatgata
ggcagccaggtggcggcggtggcatctgccgcagctgctgctgccaactacaatatccaa
caacagctggctccagcagcgtccttctgccagagagtctaccagcacatttacccgagt
cctctggggatgctgcccctggctgctcttgcaggaggcggagtcaacaagaagaacggc
agcatttcctgcttcaactgcggtgtgagcggccactacgctcaggactgcaaccagcct
tccatggactccagccagcaaggtggtttccggctcaagtacgcgggctcccacgtttca
gaagctcttgacaatgctgactaa
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