Oryzias latipes (Japanese medaka): 105356810
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Entry
105356810 CDS
T02443
Symbol
sh3rf3
Name
(RefSeq) SH3 domain-containing RING finger protein 3 isoform X1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ola01009
]
105356810 (sh3rf3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
105356810 (sh3rf3)
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105356810 (sh3rf3)
Protein phosphatases and associated proteins [BR:
ola01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105356810 (sh3rf3)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105356810 (sh3rf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-C3HC4_4
zf-RING_11
zf-rbx1
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
105356810
NCBI-ProteinID:
XP_023806987
LinkDB
All DBs
Position
21:18062287..18170954
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AA seq
845 aa
AA seq
DB search
MLTLSTDMDDSSSLLDLLECSVCLERLDTTAKVLPCQHTFCRRCLENIVSSRSELRCPEC
RILVDCGVDDLPANILLVRLLDGIKQRPQRGGSGGGGGAGAGGTGRQSLPGGSLQGYAAG
ISASPPGTAVRELPVATRSSPVKNIPALPCGKALYSYEGKEPGDLQFSKGDIIILRRKVD
DNWYHGELNGCHGFLPASYIQLIRPLSQTPPQGKALYDFEVKDKDQDKDCLAFSKDEVLT
VIRRVDENWAEGMLGDKIGIFPILYVELNETAKQLMEIDKPMPANAPGTSSEPALLGSCS
LGSSPVASPPNGNGSGHRRGEGKKNAKKRHSFSALSVSQRTTQLNNRHSMEISHPVLISS
SDPRAAARIQDAPTPGPSLSSAGLPLPPKVASLTSELLAHAKVQLPLNIYLALYAYKPQK
ADELELRKGEMYRVTEKCQDGWFKGTSLRTAASGVFPGNYVTPVSRAPFGLGVARGSCLP
SPVGGSGCSPVANKSSDPSSPGSVGPSMSRPSPTLVTSSNSVHSRDLSPASSPQTAAAQL
KNCLRSNQHQARTSMQLIHSPPAGSPERPTVALSPLRPQSSSPSRCSGQSGRPLSMVSPG
SSLGPSPLSSPASRPILSLSSPLSCLTPPNMSPVLLNGDPASPQTPSPGPSHTPTSGSLA
PKAEKKERKAAGLLKLLSGAAAKKKPRSPTSSPPTHDPSLVGQGAVATDPTQNSHHHHHH
ARSGSCPLSSQGRAGSCPIESEMAGAIGLEPLHRKSGSLDTNFPMSPPATRAGSALMVFR
PEPKPLSRERYRVLVPYPPQSEAEIELREGDVVFVHKKREDGWYKGTLQRTGQTGLFPGS
FVESF
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgcttaccctctccaccgacatggacgactcttcgtcgctcttggatctgttggagtgc
tcggtgtgcctggagcgcctggacaccacggccaaggtgctgccgtgccagcacaccttc
tgccgccgctgcctggagaacattgtcagctccaggagcgagctacgctgccccgagtgc
cgcatcttggtggactgcggtgtggacgacctgccagccaacatcctcctggttcgcctg
ctggatgggatcaagcagcggccgcagcgaggaggaagcggaggcggaggaggtgctggg
gctggtggcactggcaggcagtccctacccggtggttccctgcaggggtacgcagcgggg
atatccgcgtcccctccgggcactgcagtcagagagctgccggttgccaccaggagctcc
cccgttaagaatattcctgcactaccttgtggtaaagcgctctactcctacgagggcaag
gaaccaggtgaccttcagttttccaagggtgacataatcatcctgcgccgcaaggtggat
gacaactggtaccatggagagctcaatggttgccatggtttcttgccggccagctacatc
cagctgatacgtcctctgagtcaaactccaccacaaggcaaagcattgtacgactttgag
gtcaaagacaaagaccaggacaaagactgtctggcctttagcaaggatgaggtgctgaca
gtaatcaggcgagtagacgagaactgggcagagggcatgctgggagacaagattggcatc
tttcccattctgtatgttgagttaaatgaaacggcaaagcagttgatggagattgataag
cctatgccagctaatgcacctggtacaagctctgagccagcactcctgggatcctgcagt
ctgggatcatccccagtcgcctccccacctaatggaaatggctctggtcatcgcagagga
gaaggaaagaaaaacgccaagaagcggcactcgttttctgccctgtccgtcagccagagg
accacccagctcaacaacagacacagcatggaaatctcacatcctgtccttatcagctcc
tcagaccccagagctgcagcacgcatccaggatgcacctaccccaggcccatctctctcc
tcagcaggactaccgctcccccccaaagtagcatctttaacctctgagctgctggcccac
gctaaggtgcagctgcctctcaatatatacctggctctttatgcctataagccccaaaag
gccgatgagctggagctaagaaaaggagagatgtacagggtgacagagaagtgtcaggac
ggatggttcaaaggcacctcactgagaacggctgcctctggtgtctttccagggaactac
gtgacccctgtgtccagagctccatttggacttggtgttgctcgtggctcatgtttgccc
agtccagtcggaggaagtgggtgcagtccggttgcaaacaaaagttccgacccgtcgtcg
ccagggtctgtgggtccctccatgtcccgtccctcccctacacttgtgacctcatcaaac
tcagttcacagcagggacctcagccccgcctcctctccacaaactgctgccgcccagctt
aagaactgcctgcgctccaaccagcaccaagcgcgtacctcaatgcagctaattcacagt
ccacctgctggaagcccagagcgtcccactgtggcattatctcccttgcgtccccaaagc
tcatctccttcccgctgctccggccagtcaggccgtcctctttctatggtttctccgggc
tccagcttagggccttctcctctatcctcccccgcttcacgacccatcctctcgctgtcc
tcacctctttcctgcctcacgcctccaaacatgtcgcctgtgctgctcaatggggatcca
gccagtccacaaacaccatctccaggcccttcacacactccaacctctgggagtctggcc
cccaaagcagagaagaaggagagaaaagcagcgggcttgttaaagctcttgtcaggtgca
gccgccaagaagaaacctcgctcgcccacatcttctccacccacccatgacccctcactg
gtcggccaaggcgctgtggccactgaccccactcagaactcgcaccaccatcaccaccat
gcccgctcaggttcctgtccactgtcatcgcaggggagagccggctcctgtccaatcgag
agtgagatggcaggtgcaatagggctggagcctctgcacaggaagtcaggttcactggat
actaactttcccatgtcacccccagcaacacgagctggcagtgctttgatggtcttccgg
cccgaacccaaacccttgtcaagagagaggtatcgcgtgttggttccctaccctcctcag
agtgaggcggagatcgagctgcgagaaggggatgttgtgtttgttcataagaagagggag
gacggttggtacaaaggcaccctgcagaggacgggacagaccggcctgtttccaggcagc
tttgttgagagcttttga
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integrated database retrieval system