Oryzias latipes (Japanese medaka): 105356883
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Entry
105356883 CDS
T02443
Name
(RefSeq) LOW QUALITY PROTEIN: hemicentin-1
KO
K06467
CD22 antigen
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105356883
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
105356883
04090 CD molecules [BR:
ola04090
]
105356883
04091 Lectins [BR:
ola04091
]
105356883
Cell adhesion molecules [BR:
ola04515
]
Immunoglobulin superfamily
SIGLEC family
105356883
CD molecules [BR:
ola04090
]
Proteins
105356883
Lectins [BR:
ola04091
]
I-type lectins (Siglecs)
105356883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
Ig_5
Ig_CD22
Ig_4
C2-set_2
Ig_6
PAS_6
Motif
Other DBs
NCBI-GeneID:
105356883
NCBI-ProteinID:
XP_020562392
LinkDB
All DBs
Position
1:complement(2191092..2199200)
Genome browser
AA seq
609 aa
AA seq
DB search
MSLTAALRGFVVVLCWFAAAQSEEGWNVRYYQTEICVNKGSTVIMRSYYNYPAEINRVRT
TVEKSFWFIRTGAEPVDLKEDPEYKDRVTYSRNRKSCELQIYEVRERDSGVYKFRFITNH
VTGRYTGEPGVRLTVEELQVQVISRSDHQEYSDLQLKCFNKCDPDGFYRYVWFRNGEETR
SMILYKNSQMFRRWTSSTDRISCALSSSKMHRSPEVYPPETSSVSVSPSAEVLEGSSVTL
TCSSDANPAANYTWFKMRNSNIKVLSVGPQFVFSSIQSTDSGEYYCKAENQLGWKISFFT
LEVKYAPKNISVSVNPPEILEGSSVTLTCSSDANPAASFTWLKDNQNHLMLQMFIIFPSI
NINDSGIYVCKSENRHGWINSSVHVDVLYAPRFPSASISGSGQILEGDSVTLTCSSDANP
AANFTWLKENKDSLKSEEQMFTISDIIAEDGGLYICVAQNKLGQQNATVQVSVGSGSVGL
VAAWSIPAVLLTLMFLAVLFLKVFRRRSSEEPSVIRSQDEDAQKLEGSGRDGLTSRHPAE
DQVEIQYATVTFTKRQEDPLYSNINPVKAKRRRDSHEDKEDVVYSVITSSSNPVDGMNRL
YEIKKFSPL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgactgcagcactgagaggatttgttgttgttctttgctggtttgcagcagcg
cagagtgaagaaggctggaacgtgagatactaccaaactgaaatctgtgtgaataaagga
tcaactgtgatcatgaggagctattataattatccagcagagataaacagagtaagaact
actgttgagaaaagcttctggttcatcagaactggagcagaacctgtggatctaaaagaa
gatccagaatacaaagatagagtgacgtacagcagaaatagaaagagctgtgaactgcaa
atctatgaagtgagagagagggactctggagtttataagttcagattcataacaaaccat
gtgactggacgttacactggagaacctggagtgagattaactgtcgaagagctccaggtt
caggtcatttccagatcagaccaccaggaatattcagaccttcagctaaaatgtttcaac
aaatgtgatccagatggtttttacagatatgtctggttcagaaacggagaagaaaccaga
tcaatgattctgtataaaaacagtcagatgttccgacgctggacttcttccacagacagg
atctcttgtgctctgagttcatcaaagatgcatcgtagtcctgaagtttatcctccagaa
acctcctctgtgtctgtgagtccctccgctgaggtcctggagggcagttcagtgactctg
acctgcagcagtgatgctaacccagcagctaactacacctggttcaagatgagaaattca
aacataaaagttctctctgtaggtccacagtttgtcttcagttccatccagtccacagat
tctggagaatattactgtaaagctgagaaccagctgggttggaaaatatcattctttaca
cttgaggtgaaatatgctccaaaaaatatctctgtctctgtgaatcctcctgagatcctg
gagggcagttcagtgactctgacctgcagcagtgatgctaacccagcagctagcttcacc
tggttaaaagacaaccagaaccatctaatgctgcaaatgtttatcatcttcccctccatc
aacataaacgacagtgggatctacgtgtgtaaatctgagaacagacatggatggatcaac
tcatctgtacacgttgatgttctgtacgctccaaggtttccgtccgcctccatcagtggg
tctggacagatcctggaaggagattcagtgactctgacctgcagcagtgatgctaaccca
gcagctaacttcacctggctcaaggagaacaaagactctctgaaatcagaagaacaaatg
ttcaccatcagtgacatcatagcagaagatggagggctttacatctgtgtggctcagaac
aaactggggcagcagaacgccactgttcaagtgtcggttggatcaggttcagtgggttta
gttgctgcttggtcgatccctgctgttcttctgactctcatgttcttggctgttttattc
ctgaaggtcttcagaaggagatcctcagaagaaccttcagtgatcaggagtcaggatgaa
gatgctcagaaacttgaaggttcggggcgtgacggactgacctccagacatccagcagag
gatcaggtggagattcagtacgccaccgtgaccttcaccaagaggcaggaggatcctctc
tactccaacatcaatccagtcaaagcaaagagaagacgggacagtcatgaggacaaagag
gacgtggtctacagtgtgatcacatcatccagtaatccagttgatggaatgaatcgtctg
tatgaaataaaaaagttttctcctttataa
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