Oryzias latipes (Japanese medaka): 105357056
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Entry
105357056 CDS
T02443
Symbol
cbll1
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
105357056 (cbll1)
04131 Membrane trafficking [BR:
ola04131
]
105357056 (cbll1)
04121 Ubiquitin system [BR:
ola04121
]
105357056 (cbll1)
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105357056 (cbll1)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
105357056 (cbll1)
Membrane trafficking [BR:
ola04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
105357056 (cbll1)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105357056 (cbll1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
105357056
NCBI-ProteinID:
XP_023808219
LinkDB
All DBs
Position
23:9399611..9405089
Genome browser
AA seq
475 aa
AA seq
DB search
MDQSDNDLQGSDCSGTLGGLDVRRRIPIKLISKQPLRTKPQLRLPRPVGNRPCKSEPGDD
EKFGFKQEDRFDCGAKAGDVFGSQRRFPQPLLWDCKLNLIGERDEVPIHFCDKCGLPIQL
YGRMIPCKHVFCYDCALLHEKKGEKMCPGLSLYNCTDPVQRIEQCQRGSLYMCSIVPGCK
RTYLSQRDLQAHVNHRHMRATKSSSGRQDPVHLPQAPEISDRFRVPPPHIPKNHVHLPNQ
MHSSHDPYSQPPPPTPHDGPPPTPSLGPETFRIATVTTRKHSNLITVPIQDDSSSSRDSH
PGGPCPSQPPHHHPGDYPGQPPVVSHSHHMMAPPQQHFGPPPPISHPMQHPPQGSGTPHM
VYNQAPPPMSTAPPPPPGHIMPPYINHPPPGPPPQHTGPPVNAPPPHHYNPNSMQPFPED
QGTLSPPFNQPGGLSPGMWPAPRGPPPPRMQGPPPQGQMPGPHHPDQGRYRPYYQ
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaagcgacaacgatcttcaaggaagcgattgctctgggaccttgggtggcctg
gatgttcggaggcgaatccccatcaaattaatttctaaacagccattaaggactaaacct
cagctgcgcctgccgagacctgttggtaacagaccctgtaaaagtgaacctggagacgat
gaaaagttcggcttcaagcaggaggatcggtttgactgtggcgctaaagctggggatgtg
tttggaagtcagagaagatttccgcagcctctgttatgggactgtaagctaaatctgatc
ggtgaaagagatgaagttccgattcacttctgtgataaatgtggtctccccattcaactt
tatggacggatgattccctgcaagcatgttttctgctatgactgcgctttgcttcatgag
aagaaaggcgagaagatgtgtccaggtctcagtctgtataactgcacggatccagttcag
cgcatcgagcagtgccagcgagggtccctctacatgtgcagcattgtaccaggatgcaag
cgcacctacttgtcccagcgggacctccaagcccacgtgaaccaccgtcacatgagagcc
accaagtcctcctcgggccgccaggatcctgtgcatctgccacaagcacctgaaatttct
gatcgcttccgtgtgcctcctcctcacatccctaagaaccatgtccacctcccaaaccaa
atgcacagcagtcacgatccctacagtcagccgcctccaccgaccccccatgacgggcct
cccccaactccatctctgggaccagagacgtttcgcattgccactgtaacaactcgtaaa
cacagcaatctcatcacagtgcccattcaagatgactcgtcttcatcacgggattcccat
cctggtgggccatgccccagccagcccccgcatcaccaccctggagactatcctgggcag
ccgcctgtggtgtcacactctcaccacatgatggcgccacctcaacagcactttggtcca
cctcctcctattagtcacccaatgcagcaccccccccagggctctgggacaccacacatg
gtctacaaccaggctcctccccccatgtctacagccccgcctcccccaccagggcacatc
atgcccccctatataaatcacccacctccaggacctcccccacagcacaccggacctcct
gtgaatgcccccccacctcaccactacaaccccaactccatgcagccgttccctgaagac
cagggcaccctcagccctccgtttaaccagccaggaggactcagtcctgggatgtggcct
gctcccagggggcccccacctcctcgaatgcagggtccacctccccagggacagatgcca
ggcccccatcacccagatcagggccgctatcgaccttattaccagtaa
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