KEGG   Oryzias latipes (Japanese medaka): 105357330
Entry
105357330         CDS       T02443                                 
Name
(RefSeq) cadherin-1-like
  KO
K05689  cadherin 1, type 1, E-cadherin
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04371  Apelin signaling pathway
ola04514  Cell adhesion molecule (CAM) interaction
ola04517  IgSF CAM signaling
ola04518  Integrin signaling
ola04519  Cadherin signaling
ola04520  Adherens junction
ola05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:ola00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    105357330
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    105357330
   04517 IgSF CAM signaling
    105357330
   04518 Integrin signaling
    105357330
   04519 Cadherin signaling
    105357330
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    105357330
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    105357330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ola03036]
    105357330
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ola04515]
    105357330
   04090 CD molecules [BR:ola04090]
    105357330
Chromosome and associated proteins [BR:ola03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    105357330
Cell adhesion molecules [BR:ola04515]
 Cadherins
  Major cadherins
   105357330
CD molecules [BR:ola04090]
 Proteins
  105357330
SSDB
Motif
Pfam: Cadherin Cadherin_FAT4_N Ig_CLSTN Cadherin_2
Other DBs
NCBI-GeneID: 105357330
NCBI-ProteinID: XP_023818903
LinkDB
Position
15:9355919..9422775
AA seq 662 aa
MTVPVMVLHHGHHHVSRDAEQHHGGHRHQNHHNTEVDSANTKETAEHPDVDVYYFPKSSN
GLRRMKRDWVIPPINVPENSNGPFPLKMVTIRSSEDKIKKIIYRITGPGANEDPVGLFTM
DKDTGDLFVHQRLDREKQAHYTLFTHTDVVGASKAEDPMEIIINVIDMNDNKPIFEQTSY
VAEVAESSPKGTTVIQVKATDADEPGNDNSIIRYTILSQEPKLPSDSMFAIDTDNGAIMV
KGVGLDREKYPEYSLDIQAADMKGEGLNGKTKVVLKVTDSNDNPPVFTASTYQGSVDENA
VGVLVVKMSVTDEDEPNTPTWNAKFKIVGGDPDDFFSIETGSSKQEGIIKTAQGLDFEKS
RTHTLEVIVENGVPFTIPLTTSTATVVVTVKDVNEPPIFKEKEMTVQKPEDLPVESVVIK
SEAEDRDFERENNVKYKIIDDPENWLTVDEDSGLVKVKSLMDRESPNVTDNKYTVLLGAY
DNDLVPATGTGTLIIILEDVNDNAPAIVERETQICKHQRTPALLSIVDKDEAAHSAPYSV
AVHEKYSANWTAKMNESETGIELFLKSEIPEGKYKVVLRVADRGNLDQESSINVEVCTCL
ENGLCPLTGTGLPAYIWGILGALLLLLVVLAVLFVSRWRRAKGQGEQHLQSIEWRRQPDR
QL
NT seq 1989 nt   +upstreamnt  +downstreamnt
atgactgttcctgtcatggtcctgcatcatggacatcaccatgtaagcagagatgctgag
cagcaccatggaggtcacagacaccagaaccatcacaacactgaagtggattctgccaat
accaaagagactgcagaacatccagatgtggacgtctattattttcccaagtcgagtaat
ggactgaggaggatgaagagagactgggtcatccctcctatcaatgttcctgagaatagc
aatggaccctttccacttaaaatggttacgattcgctccagtgaggacaaaataaagaag
atcatctacaggatcacaggtccaggagccaatgaagatcctgttggactctttacaatg
gacaaagacactggtgatctttttgttcatcagagacttgacagagagaaacaagcacat
tatacactgtttacacacactgatgttgttggggcgagcaaagcagaggatcctatggaa
atcatcatcaatgtaattgatatgaatgacaacaaacccatttttgaacagacatcctat
gtggcagaagttgctgaatcctcaccaaaagggactacagtgattcaggttaaagccact
gatgctgatgaaccaggcaatgacaactcaattatcagatacactattctgagccaggaa
cctaaacttcccagtgattccatgtttgccattgacaccgacaatggggccatcatggtt
aaaggtgttggtttggacagagagaaatatcctgagtatagtctggacatacaagcagcg
gatatgaaaggagaaggattaaatggaaaaacaaaagtagttttgaaagtgacggacagc
aacgacaaccctccagtctttactgcatctacttatcagggatcagttgatgaaaacgca
gtgggggttctggttgttaaaatgtcagtaactgatgaagatgaaccaaacaccccaaca
tggaacgccaagttcaagattgtcggaggagatcctgatgattttttttccatagaaaca
ggatccagcaaacaagaaggaatcattaaaactgctcagggactggactttgagaaaagc
agaacacacactctggaggttattgtggagaacggcgtcccttttaccattccactgacc
acctccaccgccacagtggtggtgaccgtgaaggacgtcaatgagcctccaatctttaaa
gaaaaggagatgaccgttcaaaagcctgaggaccttcctgtggaaagtgtggttattaag
tctgaggcagaagaccgagactttgaacgtgaaaacaatgtcaagtataaaataattgat
gaccctgaaaactggctgacagtggacgaggattcagggctggtgaaggtgaaaagcctc
atggacagagagtcccctaatgtgacggacaataaatacacggtgctccttggtgcttat
gataatgatctagtcccagccactggaactggcacgttgatcattatacttgaagatgtc
aacgacaacgcaccagcgattgtagaacgggaaacacagatttgcaagcaccagcggact
cctgcactgctgagtatagtggataaagacgaagccgctcattctgctccgtacagtgtg
gccgttcatgaaaagtactcggccaactggacggctaagatgaacgaaagcgaaactgga
atcgagctgtttttaaagtctgaaatccctgaaggaaaatacaaagtggtcctgagggtc
gcagatcgtggtaacctggaccaggaaagctccatcaatgtggaagtgtgcacctgttta
gaaaatggactttgtcctctgactggaactggactgccagcatatatttggggaatactt
ggagctctgctgctgctgctggtggttctggcagtgctgtttgtttccagatggagaaga
gcaaaggggcaaggggagcaacacctacaaagtattgaatggagaagacaaccagataga
caattgtag

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