Oryzias latipes (Japanese medaka): 105357330
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Entry
105357330 CDS
T02443
Name
(RefSeq) cadherin-1-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04371
Apelin signaling pathway
ola04514
Cell adhesion molecule (CAM) interaction
ola04517
IgSF CAM signaling
ola04518
Integrin signaling
ola04519
Cadherin signaling
ola04520
Adherens junction
ola05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
105357330
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
105357330
04517 IgSF CAM signaling
105357330
04518 Integrin signaling
105357330
04519 Cadherin signaling
105357330
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
105357330
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
105357330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
105357330
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
105357330
04090 CD molecules [BR:
ola04090
]
105357330
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
105357330
Cell adhesion molecules [BR:
ola04515
]
Cadherins
Major cadherins
105357330
CD molecules [BR:
ola04090
]
Proteins
105357330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Ig_CLSTN
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
105357330
NCBI-ProteinID:
XP_023818903
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Position
15:9355919..9422775
Genome browser
AA seq
662 aa
AA seq
DB search
MTVPVMVLHHGHHHVSRDAEQHHGGHRHQNHHNTEVDSANTKETAEHPDVDVYYFPKSSN
GLRRMKRDWVIPPINVPENSNGPFPLKMVTIRSSEDKIKKIIYRITGPGANEDPVGLFTM
DKDTGDLFVHQRLDREKQAHYTLFTHTDVVGASKAEDPMEIIINVIDMNDNKPIFEQTSY
VAEVAESSPKGTTVIQVKATDADEPGNDNSIIRYTILSQEPKLPSDSMFAIDTDNGAIMV
KGVGLDREKYPEYSLDIQAADMKGEGLNGKTKVVLKVTDSNDNPPVFTASTYQGSVDENA
VGVLVVKMSVTDEDEPNTPTWNAKFKIVGGDPDDFFSIETGSSKQEGIIKTAQGLDFEKS
RTHTLEVIVENGVPFTIPLTTSTATVVVTVKDVNEPPIFKEKEMTVQKPEDLPVESVVIK
SEAEDRDFERENNVKYKIIDDPENWLTVDEDSGLVKVKSLMDRESPNVTDNKYTVLLGAY
DNDLVPATGTGTLIIILEDVNDNAPAIVERETQICKHQRTPALLSIVDKDEAAHSAPYSV
AVHEKYSANWTAKMNESETGIELFLKSEIPEGKYKVVLRVADRGNLDQESSINVEVCTCL
ENGLCPLTGTGLPAYIWGILGALLLLLVVLAVLFVSRWRRAKGQGEQHLQSIEWRRQPDR
QL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgactgttcctgtcatggtcctgcatcatggacatcaccatgtaagcagagatgctgag
cagcaccatggaggtcacagacaccagaaccatcacaacactgaagtggattctgccaat
accaaagagactgcagaacatccagatgtggacgtctattattttcccaagtcgagtaat
ggactgaggaggatgaagagagactgggtcatccctcctatcaatgttcctgagaatagc
aatggaccctttccacttaaaatggttacgattcgctccagtgaggacaaaataaagaag
atcatctacaggatcacaggtccaggagccaatgaagatcctgttggactctttacaatg
gacaaagacactggtgatctttttgttcatcagagacttgacagagagaaacaagcacat
tatacactgtttacacacactgatgttgttggggcgagcaaagcagaggatcctatggaa
atcatcatcaatgtaattgatatgaatgacaacaaacccatttttgaacagacatcctat
gtggcagaagttgctgaatcctcaccaaaagggactacagtgattcaggttaaagccact
gatgctgatgaaccaggcaatgacaactcaattatcagatacactattctgagccaggaa
cctaaacttcccagtgattccatgtttgccattgacaccgacaatggggccatcatggtt
aaaggtgttggtttggacagagagaaatatcctgagtatagtctggacatacaagcagcg
gatatgaaaggagaaggattaaatggaaaaacaaaagtagttttgaaagtgacggacagc
aacgacaaccctccagtctttactgcatctacttatcagggatcagttgatgaaaacgca
gtgggggttctggttgttaaaatgtcagtaactgatgaagatgaaccaaacaccccaaca
tggaacgccaagttcaagattgtcggaggagatcctgatgattttttttccatagaaaca
ggatccagcaaacaagaaggaatcattaaaactgctcagggactggactttgagaaaagc
agaacacacactctggaggttattgtggagaacggcgtcccttttaccattccactgacc
acctccaccgccacagtggtggtgaccgtgaaggacgtcaatgagcctccaatctttaaa
gaaaaggagatgaccgttcaaaagcctgaggaccttcctgtggaaagtgtggttattaag
tctgaggcagaagaccgagactttgaacgtgaaaacaatgtcaagtataaaataattgat
gaccctgaaaactggctgacagtggacgaggattcagggctggtgaaggtgaaaagcctc
atggacagagagtcccctaatgtgacggacaataaatacacggtgctccttggtgcttat
gataatgatctagtcccagccactggaactggcacgttgatcattatacttgaagatgtc
aacgacaacgcaccagcgattgtagaacgggaaacacagatttgcaagcaccagcggact
cctgcactgctgagtatagtggataaagacgaagccgctcattctgctccgtacagtgtg
gccgttcatgaaaagtactcggccaactggacggctaagatgaacgaaagcgaaactgga
atcgagctgtttttaaagtctgaaatccctgaaggaaaatacaaagtggtcctgagggtc
gcagatcgtggtaacctggaccaggaaagctccatcaatgtggaagtgtgcacctgttta
gaaaatggactttgtcctctgactggaactggactgccagcatatatttggggaatactt
ggagctctgctgctgctgctggtggttctggcagtgctgtttgtttccagatggagaaga
gcaaaggggcaaggggagcaacacctacaaagtattgaatggagaagacaaccagataga
caattgtag
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