Oryzias latipes (Japanese medaka): 105357330
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Entry
105357330 CDS
T02443
Name
(RefSeq) cadherin-1-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04371
Apelin signaling pathway
ola04514
Cell adhesion molecules
ola04520
Adherens junction
ola05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
105357330
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105357330
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
105357330
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
105357330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
105357330
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
105357330
04090 CD molecules [BR:
ola04090
]
105357330
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
105357330
Cell adhesion molecules [BR:
ola04515
]
Cadherins
Major cadherins
105357330
CD molecules [BR:
ola04090
]
Proteins
105357330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_4
TraL
Motif
Other DBs
NCBI-GeneID:
105357330
NCBI-ProteinID:
XP_023818903
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Position
15:9355919..9422775
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AA seq
662 aa
AA seq
DB search
MTVPVMVLHHGHHHVSRDAEQHHGGHRHQNHHNTEVDSANTKETAEHPDVDVYYFPKSSN
GLRRMKRDWVIPPINVPENSNGPFPLKMVTIRSSEDKIKKIIYRITGPGANEDPVGLFTM
DKDTGDLFVHQRLDREKQAHYTLFTHTDVVGASKAEDPMEIIINVIDMNDNKPIFEQTSY
VAEVAESSPKGTTVIQVKATDADEPGNDNSIIRYTILSQEPKLPSDSMFAIDTDNGAIMV
KGVGLDREKYPEYSLDIQAADMKGEGLNGKTKVVLKVTDSNDNPPVFTASTYQGSVDENA
VGVLVVKMSVTDEDEPNTPTWNAKFKIVGGDPDDFFSIETGSSKQEGIIKTAQGLDFEKS
RTHTLEVIVENGVPFTIPLTTSTATVVVTVKDVNEPPIFKEKEMTVQKPEDLPVESVVIK
SEAEDRDFERENNVKYKIIDDPENWLTVDEDSGLVKVKSLMDRESPNVTDNKYTVLLGAY
DNDLVPATGTGTLIIILEDVNDNAPAIVERETQICKHQRTPALLSIVDKDEAAHSAPYSV
AVHEKYSANWTAKMNESETGIELFLKSEIPEGKYKVVLRVADRGNLDQESSINVEVCTCL
ENGLCPLTGTGLPAYIWGILGALLLLLVVLAVLFVSRWRRAKGQGEQHLQSIEWRRQPDR
QL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgactgttcctgtcatggtcctgcatcatggacatcaccatgtaagcagagatgctgag
cagcaccatggaggtcacagacaccagaaccatcacaacactgaagtggattctgccaat
accaaagagactgcagaacatccagatgtggacgtctattattttcccaagtcgagtaat
ggactgaggaggatgaagagagactgggtcatccctcctatcaatgttcctgagaatagc
aatggaccctttccacttaaaatggttacgattcgctccagtgaggacaaaataaagaag
atcatctacaggatcacaggtccaggagccaatgaagatcctgttggactctttacaatg
gacaaagacactggtgatctttttgttcatcagagacttgacagagagaaacaagcacat
tatacactgtttacacacactgatgttgttggggcgagcaaagcagaggatcctatggaa
atcatcatcaatgtaattgatatgaatgacaacaaacccatttttgaacagacatcctat
gtggcagaagttgctgaatcctcaccaaaagggactacagtgattcaggttaaagccact
gatgctgatgaaccaggcaatgacaactcaattatcagatacactattctgagccaggaa
cctaaacttcccagtgattccatgtttgccattgacaccgacaatggggccatcatggtt
aaaggtgttggtttggacagagagaaatatcctgagtatagtctggacatacaagcagcg
gatatgaaaggagaaggattaaatggaaaaacaaaagtagttttgaaagtgacggacagc
aacgacaaccctccagtctttactgcatctacttatcagggatcagttgatgaaaacgca
gtgggggttctggttgttaaaatgtcagtaactgatgaagatgaaccaaacaccccaaca
tggaacgccaagttcaagattgtcggaggagatcctgatgattttttttccatagaaaca
ggatccagcaaacaagaaggaatcattaaaactgctcagggactggactttgagaaaagc
agaacacacactctggaggttattgtggagaacggcgtcccttttaccattccactgacc
acctccaccgccacagtggtggtgaccgtgaaggacgtcaatgagcctccaatctttaaa
gaaaaggagatgaccgttcaaaagcctgaggaccttcctgtggaaagtgtggttattaag
tctgaggcagaagaccgagactttgaacgtgaaaacaatgtcaagtataaaataattgat
gaccctgaaaactggctgacagtggacgaggattcagggctggtgaaggtgaaaagcctc
atggacagagagtcccctaatgtgacggacaataaatacacggtgctccttggtgcttat
gataatgatctagtcccagccactggaactggcacgttgatcattatacttgaagatgtc
aacgacaacgcaccagcgattgtagaacgggaaacacagatttgcaagcaccagcggact
cctgcactgctgagtatagtggataaagacgaagccgctcattctgctccgtacagtgtg
gccgttcatgaaaagtactcggccaactggacggctaagatgaacgaaagcgaaactgga
atcgagctgtttttaaagtctgaaatccctgaaggaaaatacaaagtggtcctgagggtc
gcagatcgtggtaacctggaccaggaaagctccatcaatgtggaagtgtgcacctgttta
gaaaatggactttgtcctctgactggaactggactgccagcatatatttggggaatactt
ggagctctgctgctgctgctggtggttctggcagtgctgtttgtttccagatggagaaga
gcaaaggggcaaggggagcaacacctacaaagtattgaatggagaagacaaccagataga
caattgtag
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