Oryzias latipes (Japanese medaka): 105358210
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Entry
105358210 CDS
T02443
Symbol
lrrc49
Name
(RefSeq) leucine-rich repeat-containing protein 49
KO
K16606
leucine-rich repeat-containing protein 49
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ola03037
]
105358210 (lrrc49)
04812 Cytoskeleton proteins [BR:
ola04812
]
105358210 (lrrc49)
Cilium and associated proteins [BR:
ola03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
105358210 (lrrc49)
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
105358210 (lrrc49)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_LRWD1
LRR_NXF1-5
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
105358210
NCBI-ProteinID:
XP_023809420
LinkDB
All DBs
Position
3:complement(31060038..31078565)
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AA seq
793 aa
AA seq
DB search
MESDKTACVSDKVADSLCDASGFLTLAVNRCRLHVTTVKSRAPEPAKTVTEIFHKTNMNI
KQKNNSTPTLSAGSRLQTWSRSRAANEDRADLSEQSAALLAGAGLVPHAVNTARRKSRRP
TCSEGATCCQLVVENHKQSGSNYNTVAGFSFTQLPAVTSCHQLDLERRFLKIFPQLDDMN
EVQFLNLQCNLISRIQPLSHLQHLVFLNLYDNYISDMSGIEVLQSLRVLLLGRNRIKKIC
CLENLSRLNVLDLHDNQICRIEKISHLNELQVLNLSGNCISRLENLQGLNSLTELNLRRN
CISAVTELDCLPCLQRLFLSCNNIIRFDQLACLGRSHSLSELTLDGNPVALETWYKQAVL
RCVLHLRQLDMKRVTDEDRRMAGVQARKEEEKKEKSHKQTIHKEKRRLAIRNAAQQWEGV
RACMELAPTTGTKEEISPENSPNHSPAQTNGVAQDPSPEEPRRVSPGSGPERPPGGTEIR
LRTNSRPNSPRDPKFVETGSSSVQSLSLSESHLAELDGDTLRLFGLGALEALERGWGVQT
AGAVTVITFRYINFDGIIPSLPRIRVKFPNLSHLIFLETNISRLPQLAALAQVRRLDQLT
IHPEGNPVVSLTLWRSFVIYRLYHFNLQRINGQEVTMNDVISAERVFGTLGHVAATETPR
CRLLLLLEESRKRQLQFLLEGRGRRAGLSPDDLRENGKLLGESLSRALFNYPSRDCNAES
PEEGSVESSERAAMIDQYLQELVQSASDTNLKGEALHKLWPSMFAEMVRDCVLEMRDRAA
FRQTSLAKLSETK
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagataagaccgcgtgtgtttctgataaagtcgccgacagtttgtgtgatgca
tcgggctttctcactctcgcggtcaacaggtgcaggttgcacgtcacaactgtcaagtca
cgcgcaccagaaccagcaaagacggtgaccgagatctttcacaaaacaaacatgaacatc
aagcaaaagaacaattctacaccaactttgtctgcaggaagccggttgcagacatggagc
cggagcagagctgccaatgaggacagagcagatttgtctgagcagagtgcagcactgttg
gcaggtgctggcctggttccacacgcagtaaatacagctagaaggaaatcaaggagaccg
acctgcagtgaaggggccacttgctgccagcttgttgtagaaaatcacaagcaatctgga
agtaattacaacactgtagctggtttctctttcacccagttgcctgctgttacaagctgt
caccaacttgacttagaaaggcgctttctgaagatattccctcaactggatgacatgaac
gaagtccagtttctcaacctccagtgtaacctgatctcaaggatccagcctctgtcacat
ctacagcatctcgtttttttgaacctctatgacaattacatctctgatatgtctggcatt
gaagttcttcaatctcttagagtcctcttgctggggaggaacagaatcaagaaaatttgc
tgcctggaaaacctgtccagactaaacgtcctggatttgcacgacaatcagatctgcaga
atagaaaagatctctcacctgaatgagctacaggtactgaacctctcaggaaactgcatc
tcaaggttggaaaatctccagggcctcaactctctgactgaacttaacctcaggcgcaac
tgcatctctgctgtgactgagctggactgcctgccctgcttgcagcgtctctttctcagc
tgcaacaacatcatcagatttgatcagctagcctgccttggaaggtctcactccctttct
gagctcaccctggatgggaatcctgtagccctggagacatggtacaagcaggctgtcctg
cgctgtgtgcttcatctgagacagctggacatgaagcgcgtcacagacgaggatcggcgc
atggcaggtgtacaagctcggaaagaggaggaaaaaaaggagaagagccacaaacagact
attcataaggagaaacggcgccttgctattcgaaatgcagcacagcagtgggagggtgtc
agggcctgcatggagctggcacccaccactggcacaaaggaggaaatcagtccagagaac
agccctaaccacagcccggcacaaaccaatggagttgcacaggatccttccccagaagaa
ccaagacgggtgagcccaggttcaggaccagagcgaccaccaggtggcacagaaatcaga
ctccgcaccaacagccgcccaaacagccctcgggatccaaagtttgtggagactgggagc
agtagcgtccagagcctgtccttgtctgaaagtcacctggcagagctggatggagacacc
ctgcgtttattcggactgggagcactggaggcgctggagaggggctggggtgttcagact
gcaggtgccgtcactgtcataaccttccgctacataaactttgacggcatcataccttca
ctgccgagaataagggtcaagttcccaaacctatcacatctgatctttctggagacaaac
atcagccgcctgcctcagctggcggccttggctcaggtgaggcgtctcgatcagctgacc
atccacccggagggcaatccggtggtcagtctgacactgtggcgctcatttgtcatctac
cgcctgtaccacttcaacctccaaaggatcaatggccaggaggtgaccatgaatgatgtg
atcagcgcagagcgcgtgtttggaacacttggtcatgtggccgcaacggaaactccgcgt
tgccgtctccttctcctgttggaggagtcaaggaagcggcagctgcagttcttgctggag
gggcgtggccggcgggcggggctgagtccagatgacctacgagaaaatggaaaactcctg
ggtgaaagcctaagcagagcactcttcaactacccaagcagggactgcaacgctgagagc
cctgaggagggctctgtggagtcgtccgagcgggcagccatgatcgatcagtacctccag
gagttggtccaaagcgcatcagacactaacctgaagggcgaggctttacataaactctgg
ccttccatgtttgcagagatggttcgtgactgtgtgttggagatgagggaccgagcagcc
ttccgccaaaccagcctagcaaagctctccgaaaccaagtga
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integrated database retrieval system
