Oryzias latipes (Japanese medaka): 110013491
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Entry
110013491 CDS
T02443
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04010
MAPK signaling pathway
ola04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110013491
04020 Calcium signaling pathway
110013491
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
110013491
Ion channels [BR:
ola04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
110013491
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
SH3_Tf2-1
rve
Integrase_H2C2
TMEM208_SND2
ETRAMP
Motif
Other DBs
NCBI-GeneID:
110013491
NCBI-ProteinID:
XP_023810435
LinkDB
All DBs
Position
1:25514967..25950347
Genome browser
AA seq
2297 aa
AA seq
DB search
MAIVKATLERDIKEYIAACSTCVRSKTSNRPPSGLLLPLPTPSRPWSHISVDFVTGLPPS
QGHTLPTAVETADALIHHVFRHHGTPSDIVSDRGPQFTSQFWKAFCSALGAMELDLAVHS
VQLHLQRCRDIWLQTRAAFLRTKESNCHITNRHRGASSCKQSPKFIGPYTIDCVINPTCV
GLRLPAALKVHPTFHVSQIKPVTESPLCPPSTSPPPARTIDGAPAFAVDKTLDVGRRAQT
LYDQMLSLTCCVSTWFERVSMMVILLNCVTLGMYQPCENIDCSSERCQTLQAFDAFIYIF
FALEMIIKMVALGIFGRRSYLGDTWNRLDFFIVMAGMVEYSLDLQNMNLTAIRTVRVLRP
LKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCYPEENF
TLTTGISLPQEYYMPDEDDERPFICSLPIDNGIMSCMDVPARREGGRVCCLDKDDVLYRQ
LLGLSPEPLTNGSVSLAGLCVNWNQYYTRCHTGSRNPHKDAINFDNIAYAWIVIFQVITL
EGWVEIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQREHQLMQEQR
ARCSSSSTLASEPGDCYEELFQLMCHFLRKAKRQVVSLFYTLSGKPRGFRGVGRAREAEE
ARERKANGPGRHERRAVQRPGPTCSYHNEPDHMSPAEPTALTATSAADGCPQCTMALTLK
GGVRPVCSGASNETEASEETEKEDDQTDSKEKGNKGHIRSEIRVGSHPKRDCKQIWHDIR
MKLWGIVESKYFNRGIMIAILINTISMGIEHHQQPEELTNVLEICNIVFTSMFSLEMILK
LTAFGSFNYLRNPYNVFDGIIVIISVCELVSQSDGGLSVLRTFRLLRVLKLVRFMPALRR
QLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLKTETGDTMSDRKNFDSLLWA
IVTVFQILTQEDWNVVLYNGMAATSPLAALYFVALMTFGNYVLFNLLVAILVEGFQAEGD
ANRSYSDDDHSSSDFDESEKHNSNTRICALTPNGHLELGVPSGPRGSYSSEKRSFTSESR
KSSVLSLGKSSLERRSLSLRHGPGSNYHNWGRRFPQTRWSRRSSSYSLGRRNYGFGGIPQ
VGGSLRVQSTRFPHSYAYSSEQESLLSHSQPPPLPLHPAPASLFLSRHFGGRRNRRSLSL
EFPELLRAGGQPPHIQNPDSDKKTGSGAWGSLRGGSGTGSGLGVDHRDCNGKAPSTHNHL
MTNVFPQVNARQDRADLDEETDYSLCFRIQKMMEVYKPDWCEKREDWSVYLFSPQNKFRL
LCQSIIAHKVFDYVVLVFIFLNCITVALERPKILQGSLERVFLTVSNYIFTAIFVAEMTV
KVVSMGLYLGEATYLRSSWNILDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPL
RVISRAPGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFFYCVGFDVKNI
TNKSDCLAANYKWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGIDQQPITNN
NPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEEAKRQEEKRQRRMEKKRRK
AQKLPYYASYGRIRLAIHALCTSHYLDLVITFIICINVITMSLEHYSQPQSLETALKYCN
YFFTSTFVIEASLKLVAFGFRRFFKDRWNQLDLAIVLLSVMGITLEEIEINASLPINPTI
IRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGE
LVCNADYPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPDRPGSDYDCH
TGLQFISPLYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEDAEMDAEIELELAQGGL
CCIMGGIDAIAGATGAATTGGSVGNTVSGAINAGSGMGMRGGKVVSLQDGGRGGGVPHDG
HIQHEYQHNSPAQETQWLDSVSLLIKDSLEGEMIDNLSGSVFHHYCSSPVCKDCKSHPQE
VRLAEVEQASLMSEQLSDKSSSPALPDNLSLDDHSSYQLLFRGSQHPFHSESPLAMGSSE
GSLQTTVEEGLRCGVSRLCDLNLHSTNPRHSLCPSGPPAADQGEPLLKRRSTTTTHQAYL
RHKENQNSAKGSSMSAECPQQDSTNHSVEVVSVKKGSRGYCQPLNSEHLSEMLNSLSLMS
LFIPCSLAPTLIKKWNSTGSLVQSNHSSQRCQFYTTDFLSNPWTKGKARGTEEDNSVTAY
DEESRIHPADLSSRKKR
NT seq
6894 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcgtcaaagctacgttggagcgagacatcaaggagtacatcgcggcctgcagt
acctgtgtccgttctaaaacctccaaccggcccccctctggactactgttacccttgccc
acgcctagccgtccctggtcccacatctctgtggattttgttactgggcttccaccgtcc
cagggccatacgttacctacagccgtggaaactgccgacgctcttattcatcacgtcttc
cgtcatcatgggacacccagtgacatcgtatccgatcgtggaccgcagttcacatctcaa
ttttggaaggccttctgctccgccctcggagccatggaattggatctggcagtgcactca
gtccagctccacctccaacggtgtcgggacatctggctgcagaccagggcggctttcctc
cgcactaaggagagcaactgccatatcaccaaccgtcacaggggggcttcgtcctgcaag
cagtctcctaagtttattgggccctacactattgactgtgtcatcaaccctacgtgtgtc
gggctacgtctcccggcagccctcaaggttcatcccacgtttcacgtttcccaaatcaag
ccagtcaccgagagtccgttgtgcccaccatccacttccccaccacccgcccgtaccatc
gacggcgcccctgcttttgccgtcgacaagactttggacgttgggcgtcgtgcccaaacc
ctctatgatcaaatgttgtccttaacctgttgcgtttctacatggtttgaacgtgtgagc
atgatggtgatcttgctgaactgtgtcaccctgggaatgtaccagccgtgtgaaaacatt
gactgctcttcagaacgctgccaaacactacaggcattcgatgcatttatttacatcttt
tttgctctggagatgatcataaagatggtagctcttggaatctttggccgacgctcctac
cttggagacacgtggaaccgactggatttcttcatcgtcatggcagggatggttgaatat
tccttggacctgcagaatatgaacctcaccgccatccgaactgtgagagtactgcgacct
ctcaaagcaattaacagagtgccaagcatgcgaatcctggtgaacctgctgctcgacact
ctgcccatgctgggtaatgtccttcttctttgcttcttcgttttcttcatctttggcatc
attggagtgcagctgtgggcggggctgctgaggaaccgttgctacccggaggaaaacttc
acactcaccaccggtatcagccttcctcaggaatattacatgccagatgaggatgatgag
cggcccttcatctgctcactgcccatagacaacggtatcatgtcctgcatggatgttcca
gcgcgccgtgagggaggcagggtgtgctgcctggacaaggacgatgtgctttatcgacag
ttacttggtctgagccctgaaccgctgaccaatggaagtgtcagtttagccggactgtgt
gtcaactggaatcagtattacaccaggtgccatactggaagcaggaatccccacaaagac
gccataaactttgataacatcgcatatgcgtggattgtgatctttcaggtgatcactctc
gagggctgggtggagatcatgtactatgttatggatgctcattccttctataacttcatc
tactttattctactcataatagttggttcctttttcatgatcaacctgtgcctcgtggtc
atcgccactcagttctcagagaccaagcagcgagagcatcaactgatgcaggagcagcgg
gctcggtgttcctcctcctcaacgctagccagtgaaccaggggactgctatgaggagctg
tttcagctcatgtgccacttccttcgcaaggcgaaaagacaagtggtctcccttttttac
actctgagtggcaaacctcggggctttcgtggagtgggaagagccagagaagcagaagaa
gcaagggagaggaaggccaacggtccgggaagacatgagaggagagcagtgcaaaggccc
ggtccaacgtgttcttatcacaatgaaccagaccacatgtcgccagcagaacccaccgct
ctcactgccacctcagcagcagatggctgccctcagtgcacaatggcactgacactcaaa
ggcggagtgaggccagtttgcagtggtgccagcaatgaaacagaagcctcagaggaaaca
gaaaaggaggatgaccagactgacagtaaagaaaagggcaataaaggccacatccgttca
gagatcagagtgggcagccatccaaagagggattgcaagcaaatatggcatgatataagg
atgaagctgtggggcatcgtcgaaagcaagtacttcaaccgaggcatcatgatagccatc
ctgatcaacaccataagcatgggcatagagcaccaccagcagccggaggaactcacaaat
gtcctggaaatctgcaacatcgtcttcaccagcatgttttctttggagatgattctcaag
cttacagcttttggctctttcaactacctgaggaacccatacaatgtgtttgatggaatt
attgtgataataagtgtttgtgagcttgttagtcagtcagacggaggtttgtctgtgttg
aggaccttccgactgctcagggtgctgaagctggtcaggtttatgccagctctcaggaga
cagctggtggtactgatgaagaccatggacaacgtggctacattctgcatgctgctaatg
ctcttcatcttcatctttagtatccttgggatgcacatctttggctgtaaattcagtctg
aagacagagactggggacacgatgtcagacaggaaaaactttgactcactgttgtgggcc
attgtcactgtttttcagattctgactcaggaggactggaatgtggttttgtacaatggt
atggcagccacctcaccactggcagctctttattttgtggcactcatgacctttggaaac
tatgtgctattcaaccttttggtggccatcttggttgaaggatttcaagcagagggtgat
gccaatcgctcctattccgatgatgaccactcctcctccgactttgatgaaagtgagaag
cacaactctaacacaagaatatgtgccctcactccaaacggtcacctcgagctgggggtg
ccatctgggcccagagggtcgtattcctcagagaagagaagcttcaccagcgagtccagg
aagagcagtgtgttgagcctggggaagagcagcctggagagacgctccctgtctttgcgc
catggtcctggttccaactaccacaactggggacgacgattccctcagactaggtggagt
cgcaggtctagctcatacagccttggtcgaaggaactatgggtttggagggatacctcaa
gttggaggcagcctgcgagtgcaaagcacccgtttcccccattcttatgcctattcttct
gagcaggaatcccttttatctcattcccaacctcctcctctccctctacatccagcccca
gcttcattgttcctctcaagacattttggtggaaggaggaatcgacggtctctttccctg
gagttcccagagcttctgagggcaggaggacaacctcctcacatccagaatccagactct
gacaaaaagactgggtctggggcatgggggtccctgagaggaggctctggaactggcagt
ggtttaggagtggaccatagagactgtaatggcaaggcaccaagtacacacaatcatttg
atgacaaatgtcttccctcaagtcaacgcacgccaagatagggcagacctcgatgaagag
actgactatagtttgtgcttccgtatccagaagatgatggaagtttacaaaccagattgg
tgtgagaaaagagaggattggtcagtctatctgttctccccccagaacaagttcaggctg
ctttgccagtccattattgctcataaggtctttgactatgtggttctggttttcattttc
ctcaactgcatcactgtcgctctggaaagaccaaagattcttcaaggcagtcttgaaaga
gtgtttcttacggtctccaactacatctttaccgccatatttgttgcagagatgactgtc
aaggtggtgtccatgggtctatatctaggagaggcaacatatctcaggagtagttggaac
attctggatggcttcctggtcttcgtgtctttgattgacattgtggtgtccatggcggga
ggagcaaaaatcctgggggttctgcgtgtcctcaggctgctcagaactctgcgtcctctc
agggtgatcagcagggctccaggactgaaattggtggtcgagactttgataacttccctc
aaaccaattggcaacatcgtcctcatttgctgtgcctttttcatcatttttggtattctt
ggtgttcagctcttcaaaggcaagttcttctactgtgtgggtttcgacgtgaagaacatt
actaacaagtctgactgcctggctgccaattacaaatgggttcaccacaaatacaacttt
gacaatcttgggcaggctctcatgtctctgtttgtactggcatcaaaagatggctgggtc
aacataatgtaccacggtctggatgcagtgggaattgaccaacagccgattaccaacaac
aacccttggatgctgctatacttcatctccttcctgcttattgtaagcttcttcgtcctt
aacatgtttgtgggcgtggtggtggagaacttccacaagtgtcgccagcatcaggaggtg
gaggaggcaaagcggcaagaggagaaacgacaacgtcgcatggaaaagaagaggagaaag
gcccagaagctgccatactatgcatcctatggccgtatccgcctggccatccatgcactg
tgtaccagccactacctggaccttgtaatcaccttcataatctgcattaacgtcatcact
atgtccctggagcactacagtcagccacagtctttggagactgcactgaagtactgcaac
tacttcttcacctccacctttgtgattgaagcctctctgaagttggtggcctttggcttt
cgacgctttttcaaagacaggtggaatcagctggacctggccattgtgctgctgtctgta
atgggtatcaccctggaggagattgagatcaacgcttctctgcccatcaaccccaccatc
atcagaatcatgagagtgctcaggatagcaagagttctgaagttactcaaaatggcaact
ggaatgcgagctctgcttgatacagtggtccaggctctgcctcaggttggaaacttagga
ctgctcttcatgctactatttttcatctacgctgccctgggagtggagctgtttggagaa
cttgtgtgcaatgctgactacccctgtgagggaatgagtcggcatgccacctttgaaaac
tttggaatggccttcctgacgctcttccaggtatccacaggagacaactggaatggcatc
atgaaggacaccctcagggagtgcccacccgatcgtcctggcagtgactatgactgccac
actggcctgcagttcatttctccattatattttgtgtcttttgtgctcacagctcagttc
gttctgataaacgtagtggttgctgtgctcatgaagcacctggacgactccaacaaagag
gcgcaggaggatgctgagatggatgcagaaattgaactggagctggcgcagggaggactg
tgctgcataatggggggcattgatgccattgctggggccacaggcgctgctactacaggg
ggaagtgtgggtaacactgtctctggagcaatcaatgcagggtcaggcatgggtatgcgt
ggtggaaaggtggtatcactgcaagatggaggcagaggaggtggtgtacctcatgatgga
cacatacagcacgaatatcagcacaactctcccgctcaggagacccagtggttggacagc
gtgtctctgctgattaaggattcactggaaggagagatgattgacaatctctctggctcg
gtctttcaccactactgctcctctcctgtatgtaaggactgcaagagtcacccacaagag
gtccggctggcagaggtggagcaagcgtcgctgatgtcggagcagctgtcggataagtca
tcttctcccgctttgcccgataatctcagcctggatgatcacagcagctaccagcttctt
ttcagaggcagtcagcacccgtttcacagtgagtcacctctagccatgggcagttcagag
ggcagcctgcagaccacggtggaagaaggacttcgttgtggggtttcccggctttgtgac
ctgaatctacacagcaccaaccccagacattccttgtgcccatcaggaccacctgcagca
gatcagggcgagcctttgctgaagagacggagcaccacaaccacccaccaggcctatctg
aggcacaaggagaaccagaacagtgctaaaggcagcagcatgagtgctgaatgccctcaa
caggactcaacaaaccattcagttgaggtggtgagtgtgaagaaaggaagccgaggatac
tgccagccccttaacagcgaacacttgtcggagatgctgaacagcctctccttgatgtcg
ttgttcatcccctgctcactggcaccaacattaattaagaaatggaacagcacaggctct
ttggtccagtctaatcattcatcccagaggtgtcaattttacaccactgatttcttatcc
aatccctggacaaagggaaaggcaaggggaacagaagaagacaatagtgtgacagcctat
gacgaagaaagcagaattcatccagcagacttgagctccaggaaaaaaagatga
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integrated database retrieval system
