Oryzias latipes (Japanese medaka): 110014870
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Entry
110014870 CDS
T02443
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
110014870
04121 Ubiquitin system [BR:
ola04121
]
110014870
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
110014870
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
110014870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
hAT-like_RNase-H
DBD_Tnp_Hermes
NleF_casp_inhib
Motif
Other DBs
NCBI-GeneID:
110014870
NCBI-ProteinID:
XP_023805548
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All DBs
Position
19:complement(16710625..16713147)
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AA seq
483 aa
AA seq
DB search
MSWVCRMEFCLIMDRPRKFSPVWNNFDLVTPNKVKCRLCSTELSYINKSTSSMLRHYRAR
HGNEELADTRDSTPVPNKQAVDEAVVNMIIKDCQPLSFVENEGFRELLKLILPSYALPSR
KTIKDLVSQRYEEEKEKTKKDLQSAVAVTLTADMWTSMNMEAYLAVTGHYVDKESQELYS
SVLAVQHFPQKHTAENIATVKRSLMEEWGIAGKVRCLVTDAAANMAACARMLQIRHTICI
AHSLNLIVRKSCDQIPAITEIRNKTRHIVTYFRSSVTAKEKLTQIQQQLGTQGHKLINEV
PTQWNSTYQMFERMTEQKEAVWVSLASLKPDITPLTPEECQIIEEMLRVLAPFDQATREL
SEEKRVSGSKVIPMMRMLHIELQRQATTVTKTAAQQLAENLRKRLTDAICGMESLSVMTL
ATLLDPRFKKNGFVSQQKASEAVKRLQSECAEEMRSQEPDAREEEPSSSHGSEPSSGHNL
WKT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggtttgtcggatggagttttgcttgatcatggatcgtcctaggaagttttcc
ccggtgtggaataattttgatctcgtgacgccaaacaaggtgaagtgtcggctctgctcc
acagagctatcttacatcaataagagcacttcatcaatgctgaggcattatagagctcgg
catggcaatgaagaattggcagatactcgtgacagtaccccagttcctaacaagcaagca
gtggatgaggcagtcgtcaatatgatcatcaaagactgtcagccactcagctttgttgaa
aatgagggattcagggagctcctgaagcttattttaccctcgtatgctctaccaagcaga
aagaccatcaaggacttggtgagccagagatatgaggaggaaaaggagaaaaccaaaaag
gatctccagagtgccgttgctgttactttaacagctgatatgtggacgtctatgaatatg
gaggcatatctagctgttactggccactatgtggacaaagaaagccaagaactctattca
tcagtcttggcagtgcagcattttcctcaaaaacacacagcagaaaacatcgccacggtt
aaaaggagcctcatggaggagtggggcatagcaggaaaggtcaggtgtcttgtcactgat
gcagcagcaaacatggctgcatgtgctcgaatgctgcaaatacggcacaccatttgtata
gcccattccctgaatttaattgtgagaaaatcatgtgatcaaatcccagcaataactgaa
atacgcaacaaaacacggcacatcgtgacatactttcgatcgagcgtgactgctaaagag
aagctcactcaaatacagcaacagctgggaacacagggccataaattaatcaatgaggtg
ccaacacaatggaacagtacctaccaaatgtttgagagaatgactgagcagaaggaggca
gtctgggtgtcactggcctcattaaaacctgacatcactccactgactccagaagaatgt
cagatcattgaagagatgctcagggttcttgctccttttgaccaagctacaagagaactg
tctgaggaaaaaagggtctctgggtcgaaggtcattcccatgatgagaatgctccacatt
gagcttcaacgtcaggccacaacagtgacaaaaacagctgctcagcaactggctgaaaac
ctgaggaagcggctaactgatgctatttgcggcatggaatctctcagtgtgatgactctg
gcaactctgttagatcccagatttaaaaaaaatggatttgttagccagcaaaaggcaagt
gaagcggtgaagagactgcagtcagaatgtgcagaggaaatgaggagccaagagcctgac
gcaagagaagaagagcctagctcttcacatgggtcagaacccagttcagggcacaatctc
tggaaaacatag
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