Oryzias latipes (Japanese medaka): 110015105
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Entry
110015105 CDS
T02443
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
KO
K14962
COMPASS component SWD2
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110015105 (wdr82)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
110015105 (wdr82)
03036 Chromosome and associated proteins [BR:
ola03036
]
110015105 (wdr82)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110015105 (wdr82)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
110015105 (wdr82)
COMPASS/SET1 complex (yeast)
110015105 (wdr82)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
WD40_RFWD3
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
WD_LRWD1
MinC_C
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
110015105
NCBI-ProteinID:
XP_020558779
UniProt:
A0A3P9JI81
A0A3B3HYJ9
LinkDB
All DBs
Position
5:complement(8148312..8155035)
Genome browser
AA seq
313 aa
AA seq
DB search
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHTKRVTSLSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGLKFSNDGKLILLSTNGGALRILDAFKGVVLHSFGGYNNSKG
VTLEASFTPDSLFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaacagacaatgtgctgcggagcttcagggtcgctaaagtgtttcgggaaaat
tcagacaaaataaattgcttcgacttcagttccaatggagaaactattatttctagcagt
gacgacgactcgttagttttgtacgactgccaggaaggaaaacccaagaggactttgtac
agtaagaagtatggagtggatttgatcaggtacactcatgctgcaaacactgttgtctac
agttccaacaaaattgatgataccatcagatacttgtcccttcatgacaacaaatacatc
cggtattttcctggacacaccaaaagagtgacttctctctccatgtctcctgtggatgac
acatttatttctggctcattagacaaaaccatcagactgtgggatctgcggtcaccaaac
tgccaaggtttgatgcacttgcaggggaagccggtgtgctctttcgatccagaaggtctc
atttttgctgccggcatcaattccgagatggttaaactctatgacctgcgctcatttgac
aagggtccttttgcaacctttaagcttcagtatgaccggacgtgtgagtggacaggactc
aaattcagcaacgacggaaaactaattctcctatccacaaacggaggagcccttcgcatc
ttagatgcttttaagggcgtcgttctacattcctttgggggatataacaacagtaaaggt
gtaacacttgaagcttcttttactccggattctctgtttgtgatgatcggctcagaggac
ggaaagattcatgtgtggaacgcagagagtggaatgaaggtggcgttgttggatgggaag
cacacggggcccatcacatgtctgcagttcaaccccaaatttatgaccttcgccagcgcc
tgctccaacatggcattctggcttccaaccatcgatgactga
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