KEGG   Oryzias latipes (Japanese medaka): 110015105
Entry
110015105         CDS       T02443                                 
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110015105 (wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ola03019]
    110015105 (wdr82)
   03036 Chromosome and associated proteins [BR:ola03036]
    110015105 (wdr82)
Messenger RNA biogenesis [BR:ola03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     110015105 (wdr82)
Chromosome and associated proteins [BR:ola03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     110015105 (wdr82)
    COMPASS/SET1 complex (yeast)
     110015105 (wdr82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SPT8 WD40_RFWD3 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 WD_LRWD1 MinC_C Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 110015105
NCBI-ProteinID: XP_020558779
UniProt: A0A3P9JI81 A0A3B3HYJ9
LinkDB
Position
5:complement(8148312..8155035)
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHTKRVTSLSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGLKFSNDGKLILLSTNGGALRILDAFKGVVLHSFGGYNNSKG
VTLEASFTPDSLFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctaacagacaatgtgctgcggagcttcagggtcgctaaagtgtttcgggaaaat
tcagacaaaataaattgcttcgacttcagttccaatggagaaactattatttctagcagt
gacgacgactcgttagttttgtacgactgccaggaaggaaaacccaagaggactttgtac
agtaagaagtatggagtggatttgatcaggtacactcatgctgcaaacactgttgtctac
agttccaacaaaattgatgataccatcagatacttgtcccttcatgacaacaaatacatc
cggtattttcctggacacaccaaaagagtgacttctctctccatgtctcctgtggatgac
acatttatttctggctcattagacaaaaccatcagactgtgggatctgcggtcaccaaac
tgccaaggtttgatgcacttgcaggggaagccggtgtgctctttcgatccagaaggtctc
atttttgctgccggcatcaattccgagatggttaaactctatgacctgcgctcatttgac
aagggtccttttgcaacctttaagcttcagtatgaccggacgtgtgagtggacaggactc
aaattcagcaacgacggaaaactaattctcctatccacaaacggaggagcccttcgcatc
ttagatgcttttaagggcgtcgttctacattcctttgggggatataacaacagtaaaggt
gtaacacttgaagcttcttttactccggattctctgtttgtgatgatcggctcagaggac
ggaaagattcatgtgtggaacgcagagagtggaatgaaggtggcgttgttggatgggaag
cacacggggcccatcacatgtctgcagttcaaccccaaatttatgaccttcgccagcgcc
tgctccaacatggcattctggcttccaaccatcgatgactga

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