Oryzias latipes (Japanese medaka): 110015347
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Entry
110015347 CDS
T02443
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
110015347
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110015347
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110015347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Torus
zf-RING_2
zf-CCCH_3
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-CCCH_2
zf-C3HC4_4
zf-RING_5
zf-RING_11
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
110015347
NCBI-ProteinID:
XP_020560274
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All DBs
Position
7:complement(11235997..11241452)
Genome browser
AA seq
355 aa
AA seq
DB search
MESARNGAVCRHFLKGTCRYGPRCIYRHEWPVMPPSQICRYFQKGNCWYGDRCRYLHVLL
PNMDPTLTSRRSSVPAVSSSSSVASASLERSGSEPALPQNAASMQEFSAPESTSNLSNRQ
PIHRLPENISEEQSHETGFAITQSSEVSHASASHGRAKVVEESSQEQLNEAAGTSSDSSE
VEEIEAILQSKDMTCGICMDKVYERTDARERVFGILPNCNHSFCLQCILTWRKTKGFGSD
VVRACPQCRVKSAFYVPNKYWVEGQAKESVISAFKKKCSKKRCCFYDRYGYCPFKTECLY
RHVKKSNPLPFLYLSDDEDDDGQDLLSLFIMMSLLGADEDSDDDFPFYVTGEFGF
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggctcgaaatggtgccgtttgtagacatttccttaaaggcacctgtcgctat
gggccaagatgcatctaccgtcacgaatggccagtcatgccaccatcccagatatgcagg
tattttcagaaaggcaactgctggtatggtgaccgatgcaggtatctccatgtacttctg
cccaacatggacccaactttaacatctagaaggagttcagtgccggccgtctcctcctcc
tccagtgttgcttccgcttcacttgaacgaagtgggtcggaaccagcactcccacagaac
gctgcttccatgcaggaattcagcgcgcctgagtcaacgtctaatctctcaaaccgtcag
cctattcaccgcttaccagaaaatatatcagaggagcagtcacacgaaaccggttttgcg
attactcagagctcagaagtttcacatgcaagtgcaagtcatggcagggctaaggttgta
gaagagtcgtctcaggagcaactcaatgaggctgctggcacctccagtgacagtagtgaa
gtggaggaaattgaggccattctgcagagtaaagacatgacttgtggcatctgtatggat
aaggtgtatgagagaacggatgcaagagaacgtgtttttggcatcttgccaaactgcaat
cattccttctgtctgcaatgcatcttgacttggaggaaaacaaaaggatttgggtcggat
gttgtaagggcatgcccacagtgcagagtaaagtctgctttttatgtgccaaacaaatac
tgggttgaaggacaagcaaaggaaagtgttatttctgcatttaagaagaagtgcagtaag
aaaagatgctgcttctatgaccgatacggatactgtcccttcaaaacggagtgcctttat
cggcatgttaaaaaatcaaatcctctcccatttttgtatctgtctgacgatgaagatgat
gacggtcaagatctcctaagtcttttcataatgatgtcccttcttggtgctgatgaggat
tcagatgatgactttccgttttacgtgactggagagtttgggttttga
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