Oryzias latipes (Japanese medaka): 110015802
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Entry
110015802 CDS
T02443
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
110015802
04121 Ubiquitin system [BR:
ola04121
]
110015802
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
110015802
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
110015802
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
hAT-like_RNase-H
zf-C2H2_2
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
110015802
NCBI-ProteinID:
XP_023806977
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Position
3:complement(323950..326872)
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AA seq
574 aa
AA seq
DB search
MAPGKKRSVAWDHFNLISPNKVQCLICKHEFAFNDSTSSMMRHLRSVHHVETPQSENQAF
NPPHIVSRKQELDSALVDMIVMDAQPFSIVEDKGFKAFVNLLDPSYIIPNRKALRTMVEE
KYKAKKEKALDVVSRASAVSLTADMWTSINMDAYLAVTCHFITEEVELASVVLGVLKFPQ
THTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANILLLRHIMCFAHMLNLVVKK
SLAQTPELEDIRSKGRRIVGLFKSSTTAKEKLSEMQRQLARPEHKLIQEVETRWSSTFNM
LERLFKEREPLGAALATLHTDLPPLTSEDYQAIHHCLSILSPFQEATVELSTEKRVSASK
VIPMVKMLKHYISSRCGQITHPLGEKLATNLKNNLHERFSALEKVTALSMATLMDPRLKE
LGFCSQGSAHTAIERLTKECAATMQALLPEAQPQSPPREGPSSQQEDGGLWALLDRHVGV
QQQGTSTTASATVEVQRYLKEPHIPRTQDPLRYWVTHKVLYPHLYKLAMKFLCTPASSVP
CERIFSKAGEIVSQRRNRLKPSTVEKILFLNKNL
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggcacccggtaaaaaacgttctgtggcttgggatcatttcaacttgatttctccaaat
aaggtgcaatgtttgatttgcaaacatgaatttgcatttaatgatagtacatcctccatg
atgcgacatctccgctccgttcatcatgttgaaactccgcagtcggaaaatcaagccttc
aatccacctcatattgtgtcaagaaagcaagaacttgattctgcattggtggatatgatt
gtaatggatgcacaaccattttcaattgttgaagacaaaggcttcaaggcttttgtcaac
cttttggacccatcctacataattcctaataggaaggccttgaggacaatggtggaggag
aagtacaaagccaaaaaggagaaggctttagatgtggttagcagggcctctgctgtcagc
cttacagcagacatgtggacatccattaacatggacgcttacttggctgtaacatgccat
tttatcaccgaggaggtggagctggcctctgtggtcttgggggttctgaagtttccccaa
acccacactgcagctcacttggctgaggccaaaaatcttctcatggaagaatggggaatt
aaagggaaggtgacaggcctggttacagactgtgctcccaacatggttgcatgtgctaat
atattactgcttcggcacataatgtgttttgcacatatgcttaatttggtggtgaaaaag
tcccttgcccaaacccctgaactagaggatatccgaagtaaggggcgtaggattgtcggt
ctttttaaatccagcaccacagcgaaggagaagctgtcagagatgcagcgacagctggcc
aggccagagcacaaattaatacaagaggtggaaacaagatggagcagcacatttaatatg
ttggaaaggttgtttaaggagagagagccactgggggcagctctggccaccctccatacg
gaccttcctccactcacctcagaggactaccaggccatacaccactgcttgagcattctt
tcaccgtttcaagaggccacagttgagctttcgacagaaaaacgagtgtcagcatccaaa
gtcattcccatggttaaaatgctgaaacattacatctcaagcaggtgtggtcagatcaca
cacccacttggtgaaaaactggccactaacttgaagaacaatctccatgagaggttttca
gctctggagaaggtcactgctctgtcaatggcaaccttgatggacccaaggcttaaagag
ctggggttctgcagccaaggctctgcccacacggccatagagcgactcactaaagagtgt
gctgcaacaatgcaggcgctacttccagaggcacagccacagtcgccacctagagaaggt
ccttcaagtcagcaggaagatggtggtctctgggccctgctggacaggcatgtgggggtt
caacagcaggggaccagcacaactgccagtgcaacagtggaggttcagaggtacttaaag
gaacctcacatcccaaggactcaggacccactgagatactgggttacccacaaggtttta
tacccacatctctacaagctggcaatgaagtttttatgcacaccagcttcatctgtgcct
tgtgagaggatcttctccaaggctggcgaaatcgtcagccaaagacgaaacaggctgaag
cccagcacagtggagaaaattctgtttttaaataaaaatctataa
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