Oryzias latipes (Japanese medaka): 110017206
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Entry
110017206 CDS
T02443
Name
(RefSeq) integrin alpha-M-like isoform X1
KO
K06461
integrin alpha M
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04145
Phagosome
ola04514
Cell adhesion molecules
ola04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110017206
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110017206
09142 Cell motility
04810 Regulation of actin cytoskeleton
110017206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
110017206
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ola04147
]
110017206
04515 Cell adhesion molecules [BR:
ola04515
]
110017206
04090 CD molecules [BR:
ola04090
]
110017206
00536 Glycosaminoglycan binding proteins [BR:
ola00536
]
110017206
Membrane trafficking [BR:
ola04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
110017206
Exosome [BR:
ola04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110017206
Cell adhesion molecules [BR:
ola04515
]
Integrins
Integrin alpha subunits
110017206
CD molecules [BR:
ola04090
]
Proteins
110017206
Glycosaminoglycan binding proteins [BR:
ola00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
110017206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
VWA_2
FG-GAP_2
vWA-TerF-like
Copine
Motif
Other DBs
NCBI-GeneID:
110017206
NCBI-ProteinID:
XP_023805042
LinkDB
All DBs
Position
19:7850760..7869450
Genome browser
AA seq
1132 aa
AA seq
DB search
MDWIFFATLIWFVLEAALCFNLDPVAWKSLSSGDAGFGHQMVLRQSDLLVGAPLQQNSRN
RRGNILKCSNGRCVTENISDGMLAVNMSLGLTMTSDPSTQNTLVCGPTIPTACKHITMYN
GVCIELDRYNRVTRRVPSVLPQCKKANIAFLLDGSGSVSGTDFTKMKEFVTNLISSLQQE
DAKFAVAQFSRGYETYFDFNTYSPYNWKTKVNEIKQLRGITNTAGAIKNIVRGVFSGAFP
SNADIILIVITDGESSDSGQLPSAINEAQSANIVRYAIGVGRAFTSSRGKRELDLIASYP
PQKHVFQVESFQALENIRTTLQSQIFPIEGSQTGGNTLKMEMSQEGFSAAYGPMGVQMGI
VGANQWKGGYKRYGNSASVSYESEKMETDSYLGYSMAVATTTRGALTILGGPRYQHRGAV
EVVFRDTFKQVINPSQLQAGEYFGAVLCAMDVDNDSFSDLILISSPMYKEADREGRVYVC
TIVLFNIECSFERPSSQTILRGDPTTKGRFGSALAVLPDLNMDTFNDLAVGAPLEDDGQG
SIYIFHGERDKSINPTYSQRISASEVQSGLKFFGVSFTQWSSDQSGDRLPDLVVGSKGTV
VFLRSRPIVTVEPSVTFSPEKISTQDENCSKDLKTTARVCFIMKTRTAVDTAEAKITYTL
TLDATRKFPNSRAYIAEKQRHQTSSLEVGLRKDECHSIEFFIQACPEDALNPLNNELSFK
FEGLPSSTNLRPSLGHQSMTTFHPMEFEINCGADQTCMDNLKVDFNFSSSALVKVGIDEL
VNVTVSLENREENSYNSHVTLTYPAGISYRKFTIIKGRIECNSSDSEDGQSRGNTLCTVD
KPIFKSKSKAIFIVSYGIETNSQVGRQISITANASSGNQQHSSLSELYKKKEIDVKYSIL
VTIEGSHIYRNFSFGKDLKKPFQQSAEVTNNFRALNLTVVIEVPIKLGDKDIWGDGESLQ
IPDCQSVKDDKPTITDFTDQVKKTKIVDCSVATCRTFKCRRFMEKQEKITHTISANLTSG
WIEQIGLSSSRFLLISTVSLEYDQDQYIFFSTTSTHKPPVRKLEAEVEIYSDPDFTKEIV
GGSLGGLAFVALVTAGLYKGGFFKSKYSQMINENANAVDPDADPDTGAPPEA
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggactggatattttttgcaactcttatctggtttgtattagaagctgcactttgtttc
aatctcgatcctgtggcttggaagtccctgagttcaggagatgcaggttttggccaccag
atggtgctaaggcaatcagatttgcttgttggtgcacctcttcaacaaaactcgagaaat
cgaagaggaaatatactgaaatgctccaatggcagatgtgtaactgagaacatttcagat
ggaatgttggcagtgaacatgtccctcggtttgacaatgacaagtgatccgtctacacag
aacactttggtgtgtggcccaaccattcccactgcatgcaaacatattaccatgtataat
ggcgtgtgcattgagttggacagatataaccgcgtgacacgccgtgttccatctgttctt
ccgcaatgtaaaaaagcaaacattgcatttctattggatggctcaggcagtgtttctgga
acagactttaccaaaatgaaggaatttgtgacaaatctcatcagttcacttcaacaagaa
gatgcaaagtttgcagttgcccagttttctagaggatatgaaacctactttgattttaat
acatattccccctataactggaagacaaaagtaaatgaaataaagcagctgaggggcata
actaatacagctggagccatcaagaatattgtgcgtggagttttctctggtgcttttcca
tcaaatgcagatataattttgatagttattactgatggagaatcgtctgactctggacag
ttgccatcagcaataaacgaagctcagtcagccaatattgttcgatatgctattggggtg
ggcagggcattcacctcctctagaggaaaaagggagcttgacttgattgcatcttaccca
ccacaaaagcatgtgtttcaagtagagagctttcaggcacttgagaacataagaacaact
ttacaatcccagatttttcccattgaaggatctcagactggtggaaacacactgaaaatg
gaaatgtcccaggagggctttagtgctgcttacggccctatgggagttcagatgggaatt
gttggtgctaaccagtggaagggaggctataagagatacggcaacagcgcgagtgtgtcc
tatgagtctgagaaaatggagactgacagttatcttggttactccatggcggttgctacg
actactagaggtgcactgacaattttggggggtccaagatatcagcacagaggagctgta
gaggtggtttttcgggacacatttaaacaagtaatcaaccccagtcaacttcaggctggg
gaatattttggcgcagtgctttgtgccatggatgtggataatgacagcttctctgatctg
atcctcatatcttctccgatgtataaggaggctgacagagaaggacgagtctatgtctgc
acaatagttctgtttaacatagagtgttcctttgaaagaccatcctcacaaaccatatta
agaggagatccaacaaccaagggacggtttggatctgctctcgctgttctgcctgatctg
aacatggatacatttaatgatctagcagttggagcacctttagaggatgatggtcaaggc
agtatttacatattccacggtgaacgggacaaaagtatcaatcctacctattcacagaga
atctctgcttctgaagtgcagtcaggactgaagttctttggcgtctccttcactcagtgg
tcttctgatcagagtggtgacagactgcctgacttagtggtgggttcaaagggcacagta
gtttttctcaggtccagacctatagtgactgtggaaccttctgttaccttcagcccagag
aaaatttcaacacaggatgaaaactgctcaaaagatctgaaaaccacagccagagtctgc
ttcatcatgaaaacacgaactgctgttgacacagctgaagcaaaaattacttacactcta
acactggatgccacccgaaagttcccaaacagccgagcttacattgctgagaaacaacga
catcagactagctcacttgaagttggcttgagaaaagatgagtgccactccattgaattt
ttcattcaggcttgtccagaagatgctctgaatccacttaacaacgagctcagttttaaa
tttgaaggtttgccttccagcacaaatcttagaccaagtcttggtcatcaatctatgaca
acctttcatccgatggagtttgagatcaactgtggcgctgatcagacatgtatggataac
ctgaaagtggatttcaacttcagcagctctgcgttggttaaagtgggcatcgatgaactt
gtgaatgtaacggtatcactggagaacagagaggaaaactcatacaacagccatgttact
ctcacatatccagctggaatctcctacaggaagttcaccatcattaaggggagaattgaa
tgcaactcttcagacagtgaggatggtcaaagtcggggaaacacactatgcacggttgat
aaaccaattttcaaaagcaaatctaaggctatttttatagtttcctatgggattgaaacc
aacagtcaagttggcagacagatctccatcactgctaatgcctccagtgggaatcagcag
cactcctctttgagtgaactctacaagaaaaaggagattgatgtgaagtacagcattctg
gttacaattgaggggtcccacatctacaggaacttctcttttggaaaagacttgaagaaa
ccattccaacaatctgcagaggttacaaacaatttcagggcattaaatctgactgttgtg
atcgaggttcctataaaactcggagacaaagacatttggggagatggggaaagtctgcag
attccagattgtcaaagtgtaaaagacgataaaccgaccatcactgactttactgatcaa
gtaaagaagaccaaaatagtggactgctctgtagccacatgcaggacattcaagtgcaga
aggttcatggagaagcaggagaaaataacacataccatctctgccaatctgacttcaggg
tggatagaacagattggactttcttcctccagattcctcctgatcagcacagtcagtctt
gaatacgaccaagatcagtacatctttttctccacaacttccacccacaagcctcctgtt
cgcaagcttgaagcagaagtggagatttactctgatccagatttcactaaagagattgtt
ggaggatctctgggagggttggcatttgtggccttggttactgctggcctatataagggt
ggattctttaagagcaaatacagtcaaatgattaatgaaaatgcaaatgcagtggatcca
gatgcagatccagatacaggagcccccccagaggcataa
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integrated database retrieval system