Oryzias latipes (Japanese medaka): 111946807
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Entry
111946807 CDS
T02443
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
111946807
04121 Ubiquitin system [BR:
ola04121
]
111946807
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
111946807
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
111946807
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
hAT-like_RNase-H
DUF659
Motif
Other DBs
NCBI-GeneID:
111946807
NCBI-ProteinID:
XP_023806962
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All DBs
Position
21:132532..135440
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AA seq
513 aa
AA seq
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MMRHLRSVHHIETPQSANQAFNPPCIVSRKQELDSALVDMIVMDAQPFSIFEDKGFKAFV
NPSYIIPNRKALKTMVEEKYKAKKEKALDVVSRASAVSLTADMWTSINMDAYLAVTCHFI
TEEVELASVVLGVLKFPQTHTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANIL
LLRHIMCFAHMLNLVVKKSLAQTPELEDIRSKGRRIVGLFKSSTTAKEKLSEMQRQLARP
EHKLIQEVETRWNSTFNMLERLFKEREPLGAALATLHTDLPPLTSEDYQAIHHCLSVLSP
FQEATVELSTEKQVSASKVIPMVKMLKHYISSRCGQITHPLGEKLATNLKNNLHERFSAL
EKVTALSMATLLDPRFKELGFCSQGSAHTAIERLTKECAATMQALLPEAQPQSPPREGPS
SQQEDGGLWALLDRHVGVQQQVTSTTASATVEVQRYLKEPHIPRTQDPLRYWVTHKVLYP
HLYKLARKFLCTPASSVPCERIFSKAGEIVSQR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgacatctccgctccgttcatcatattgaaactccgcagtcggcaaatcaagcc
ttcaatccaccttgtattgtgtcaagaaagcaagaacttgattctgcattggtggatatg
attgtaatggatgcacaaccattttcaatttttgaagacaaaggcttcaaggcttttgtc
aacccatcctacataattcctaataggaaggccttgaagacaatggtggaggagaagtac
aaagccaaaaaggagaaggctttagatgtggtcagcagggcctctgctgtcagccttaca
gcagacatgtggacatccattaacatggacgcttacttggctgtaacatgccattttatc
accgaggaggtggagctggcctctgtggtcttgggggttctgaagtttccccaaacccac
actgcagctcacttggctgaggccaaaaatcttctcatggaagaatggggaattaaaggg
aaggtgacaggcctggttacagactgtgctcccaacatggttgcatgtgctaatatatta
ctgcttcggcacataatgtgttttgcacatatgcttaatttggtggtgaaaaagtccctt
gcccaaacccctgaactagaggatatccgaagtaaggggcgtaggattgtcggtcttttt
aaatccagcaccacagcgaaggagaagctgtcagagatgcagcgacagctggccaggcca
gagcacaaattaatacaagaggtggaaacaagatggaacagcacatttaatatgttggaa
aggttgtttaaggagagagagccactgggggcagctctggccaccctccatacagacctt
cctccactcacctcagaggactaccaggccatacaccactgcttgagcgttctttcaccg
tttcaagaggccacagttgagctttcgacagaaaaacaagtgtcagcatccaaagtcatt
cccatggtcaaaatgctgaaacattacatctcaagcaggtgtggtcagatcacacaccca
cttggtgaaaaactggccactaacttgaagaacaatctccatgagaggttttcagctctg
gagaaggtcactgctctgtcaatggcaaccttgttggacccaaggtttaaagagctgggg
ttctgcagccaaggctctgcccacacggccatagagcgactcactaaagagtgtgctgca
acaatgcaggcgctacttccagaggcacagccacagtcgccacctagagaaggtccttca
agtcagcaggaagatggtggtctctgggccctgctggacaggcatgtgggggttcaacag
caggtgaccagcacaactgccagtgcaacagtggaggttcagaggtacttaaaggaacct
cacatcccaaggactcaggacccactgagatactgggttacccacaaggttttataccca
catctctacaagctggcaaggaagtttttatgcacaccagcttcatctgtgccttgtgag
aggatcttctccaaggctggcgaaatcgtcagccaaagatga
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