Oryzias latipes (Japanese medaka): 111948792
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Entry
111948792 CDS
T02443
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03430
Mismatch repair
ola03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111948792 (mlh1)
03460 Fanconi anemia pathway
111948792 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ola03400
]
111948792 (mlh1)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
111948792 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
TMEM219
Motif
Other DBs
NCBI-GeneID:
111948792
NCBI-ProteinID:
XP_023819255
UniProt:
A0A3B3HRQ1
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Position
15:complement(29738423..29745165)
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AA seq
720 aa
AA seq
DB search
MAGVIRRLDETVVNRIAAGEVIQRPANAVKEMIENCLDAKATNIQVTVKDGGLKLLQIQD
NGTGIRKDDMEIVCERFTTSKLQTFEDLSSIATYGFRGEALASISHVAHVTITTKTADAK
CAYRASYRDGKPRGPPKPCAGNQGTQIMVEDLFYNVSTRRKALKSPADEYSRIVEVVSRY
AIHNSGKSLTVKKQGETVADVRTLPNASVVDNIRSVFGNAVSRELIQVGCEDPKLAFKMS
GYISNANYSVKKYVFILFINHRLVESSALKKAVETVYAAYLPKKTHPFLYLSLEISPQNV
DVNVHPTKHEVHFLHEDSVIESVQKHIDGKLLGFNSSRTFFTQTLLPGPLKASSSSAEPS
ERVYAHQMVRTDCRSQKLDAFLRPKEKPPPDPEAASVGRVESSPPRQHMGEMADSQDAEA
RQEARQEARQEARQETRQGGEKAQDVVRKRQRKEEEEELTAAATPRRRVVKLVSVKELRA
EISENTHKGLQEMLQKHSFVGCIDPQWTLIQHHTKLYLLNTTKLSQELFYQILIYDFGNL
GVLRLSTPAPLYDLAMLALDSEESGWTEDDGPKEGLAQYIVDFLKKKAEMLEDYFSMEID
QEGNLTGLPLLLDKYTPILEGLPIFILRLATEVNWDSEKDCFRDFSRECSMFYSIRKQFV
LEAEPGAEQEAEGSSWRWKVEHVIFKALRTLFSPPKRFSEDGAVLQIANLPDLFKVFERC
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagtcatccggcggctggacgagacggtggtgaaccgcatcgctgcgggagaa
gtgatccagcgtcccgcaaacgcggtgaaggaaatgattgaaaattgtttggatgcaaag
gccacaaacatccaggtgaccgtgaaagacggcggcttgaagctgctgcagattcaggac
aacggaaccggaatccggaaagacgacatggagatcgtctgtgaaagattcaccaccagc
aaacttcagacctttgaggacctttcatccattgcaacctatggattcagaggagaggct
ctagctagcatcagccacgtggcccatgtgaccatcaccaccaagacagctgatgccaag
tgtgcctacagagccagctacagagatggaaaacccagaggcccccccaaaccgtgtgct
gggaaccaggggacccaaatcatggtggaggacctcttctacaacgtgtccaccaggagg
aaagccctgaagagccccgctgacgagtactcccggatcgtggaggtggtcagcaggtac
gccatccacaactcaggaaagagtctgacggtgaagaagcagggggagactgtggccgat
gtcaggacgctgcccaacgcgtctgtggtcgacaacatccgcagtgtttttggaaacgcc
gtcagcagggagctgatccaagtcggctgtgaagatcccaagctggcctttaagatgagc
ggctacatctccaacgcaaactactccgtcaagaaatacgtcttcatcctgttcatcaac
catcgtctggtggagtccagcgctctgaagaaagcggtggagacggtttacgctgcatac
cttcctaagaagacgcaccctttcctgtacctcagtctggagatctcacctcagaacgtg
gatgtgaacgttcatcccacaaagcacgaggtgcatttcctgcacgaggacagcgtcatc
gagagcgttcagaagcacatcgacggcaaacttctgggcttcaactcgtcccggaccttc
ttcactcagacgctgctgccgggtccgctgaaggcctccagctcctcagcagaaccttct
gagcgggtctacgctcaccagatggtcagaaccgactgtcgctcccagaaactggacgcc
ttccttcggccaaaggagaagcccccgcctgaccctgaagctgccagtgtggggcgggtg
gagagcagccccccccggcagcacatgggggagatggcggactcacaagatgcagaggcg
cggcaggaggcgcggcaggaggcgcggcaggaggcgcggcaggagacgcggcagggcggg
gagaaagctcaggacgttgtgagaaaacgacagaggaaggaggaggaggaggagctgacg
gctgcagccacgcccaggaggagggtggtgaagttagtcagtgtgaaggagctgagggca
gagatttctgagaatacccacaaaggcctgcaggagatgctgcagaagcactcgttcgtg
ggctgcatcgacccccagtggactctgatccagcaccacaccaagctgtacctgctgaac
accaccaagctcagccaggagctcttctaccagatcctcatctatgactttgggaacctg
ggcgtcctcagactgtctacgccggctcctctgtacgacctggccatgctggccctggac
tccgaggagagcggctggactgaagacgatggtccaaaggaaggcctggctcagtacatt
gtggacttcctgaagaagaaagccgagatgctggaggactacttctccatggagatagac
caggagggaaacctgaccgggctgccgctgctcctcgacaaatacacccccattctggag
ggcctccccatcttcatcctgcggctcgccacggaggtgaactgggacagcgaaaaggac
tgcttccgagacttcagcagggagtgcagcatgttctactccatcaggaagcagttcgtc
ctggaggcggagccgggggcggagcaggaggccgaggggagttcctggcgttggaaggtt
gagcacgtcatcttcaaagccctgcggacgctcttcagtcctccaaagaggttcagcgag
gacggcgccgtgctgcagatcgccaacctgccggaccttttcaaagttttcgagcggtgc
tga
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