Oryzias latipes (Japanese medaka): 111949050
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Entry
111949050 CDS
T02443
Name
(RefSeq) uncharacterized protein LOC111949050
Organism
ola
Oryzias latipes (Japanese medaka)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecA_DEAD
DEAD
P-loop_SecA
Helicase_C
ResIII
SecA_PP_bind
Eapp_C
Motif
Other DBs
NCBI-GeneID:
111949050
NCBI-ProteinID:
XP_023820895
LinkDB
All DBs
Position
17:29975908..29990606
Genome browser
AA seq
2617 aa
AA seq
DB search
MGNVPSECHMGDSLRCRICNKVLPPCTSFDHLYKGTFRGQYVYIFNGGEYYRPVGYDNMY
KCNYCFNKEINDQENLRREEERRREEEQRRREEERKREEERKKREEELNQRLEESQHQAK
EQYEQHLRTNLSEQESKRKVLKGHLDEFESDGDSDDLLEILSLKCGFEVADLSLDELSSD
QLGKVVSALDKLLFEEWVHALPSLTTLKHTQVYITELCVLSVEKLEEESSQRLCDHMQFL
IGSISQSAGSAADSFLLTQALYLTMMHFYSDSNSSDTDAVLIAKQWAEDELSTDLLFPAE
FLSILLSSMQNSVERESVFILKMEIKCLKLLLSTLTDLHTKETHSESTEMILRLVQENQW
TPMEALNLLKGLSKKCAEKASITKLLILVKVYDVSPDWRDDYGRTFTEAIDFAANISEDF
PKILRKSDERNLLKALAELKSSQNLDDSLTEMIKNIPSGVLVYSEQPQKQPTCMRDSIKS
GSLSTDDLQSCLSLLCKAVFDSKGWWPSVKHMLQWCAMLLKENTQVPQLVGTEEDPCVLA
MYAAIQVCKGNKLDIVLNSDIESDQQMKEWSGFYNSLGISFNTNKTTGTSFKDVYEADIV
YGTLSDFVSDYIQHAKEVMENRVPPLPRGFFIEEQSLDSLENLEFLKLKGNSPLEFAAQT
LQNIMQRCKSLEMEPKRWFVKALFQNLHNNMNKGLNTKSPIIIDILKKLSGQTLQFNEIF
ILTILENLVRVVCSEAEAEKETAAQAGRWCLEALLSCAGQSQDLNEETKQILEMVLNFSR
HAWSPVELLNLLGALTQHHSTEGCTSIMKILHLLETYQVSSTWTDDSNQTLLDLLGSYKT
ENLIQHLDKSLRDEKGKTIDMLFEELRQMKDIDEQTLTKSYSIVTHVTNLIQSGEIKNYK
DITQAKTLSQNMDKENLQEILAFLCNAVHQQVADEKWWPRATQMISWCLLALSDTGKLLE
MGTGEGKSCVIAMFAVLRVLRGEKVDVVSSSSVLCQRDAEEWGKFFEHFGITVDTNTNKT
EDSERKECYQKDVIYGTIETFAADHLRQIFEMKDVRPDRKYQCIIIDEVDSLLLDQGVQL
TYLSSPMVCMQHLNTVLAMIWAHVRQYGYVSSPYQSFVRGPPASFFKAIYDSIDTKETEI
TDPIDILRIAEETNTVPMGFAEEIYNSKPDELRDKLKTVSKDTAVNFFKELENYVPYGFT
VYTLNEKGLLSLEKLSPYDKNSIPELTFLVMEEGFCCSLYDSDEILVQPIADTISEKIQY
TPCTNNKDEIRIPGFLKNLIGEKMSVWTQNAFLALQLREGRDYVVENNHVCPVDFRSTGI
VELNKKWGDGLQQFVEIKHQIKLSTISTVTNYISNVAFFEKYQGKIYGTTGTLGSEKDIL
FLKNLYPNLTACKMPAFNRKKLFEVEGKVTTSSEEWKSEIKHVVMAQVSKNSYRDGRAAL
IICETINKAKEIYDDLKSCVSGDIILYCRSDNDSLSKIEKTLLPGDVIVATNLAGRGTDI
KVSKDVNNNGGLFVILSFLSDNTRVELQAFGRTARKGKPGSAQIFMSTEHLQRGFKTGTS
LEEAKSTRDTLAEERIRCMMDDVHEMKLREELFSDYCKTLQEVHKISDEDEKRVMIDIMN
EFWGIWLQIKSEDIDQLKMEELKQSLKADLAEARDQSQKQESPCSSIYHFIKFGNVALDD
KKWDLGASLFQKAMDQDKSWAAIASYNHAYCTIMQRKNNYLKNAREDLKKAEESLQCLSE
ESMICLQFVKMGSVESTKNEQTSLEKQLTTRCNMYETWGKNISEAIKKLDEIIEKDKNAV
AKKSPVFSLISSADEELQVEAYSLYKGGLQYAFAVEQEPSIWEAILVFFLGVLQIVAGVL
LAVFTCGALAQVGFGLISEGVSDCIYGIEALVTGEFSWKDWAIQKAISVGVSLITFGVGK
LVSKGLKACKMALKHLGKKLKALPKLISKHAKDSMSAVTKTNLKNAVKEASKKIGKEIFF
QGLGKAEEEIMKQILKSIKNDLTKTITNGVESNLEKDPLSSLVDSTIVLHLVDKEQLKEL
LNDEKRKANLLEVFKKLSKTALQPFYADLSWQNKLNSSIIKVIDRAKEEAKGKVKVFFQV
IQAAHLSILAADAVAAVSTISTKFFSNLQKELESFKQNTNITEKVKENELSASDSEILKS
LKQDIANAISELLADAMVEVFNQKFSGHIISQVQDKVNGALGEYIKKGFKRAEDKLKAAR
SSTADMTVNPDSQLSRSYAEKIKSPGSGGTILDVRVLSEATGTKVVILTENKHGSLTKMQ
EVNPRSKTSDQTVTLIYRPKSDKHPDGHFDTYIDNKIVITNSNGKSSLFLALARARKPTA
NEVEISQEADYLRSAEAKTLLQRPSQWGSFIKHKQWVERLRDSDWYIPEGSRPKQIMNKI
QTSLNTQVGEINYYIKWQKHYPQNPKMTQIFNTDHQPPPNSILEASQVNQNSRLAKAMLE
VGPKPSTFDSVDVNADVEKHHGLQLQNTGALQGKNQNFPAGTSEKFTTLLTTAISRDDVE
STFKLMVIGAAVDYGHVSGGSNFKSSQNLKKSKTRLSSFEKRVQENSRDMVEKWFGLLQG
KDVMTQEQLNTITAWIKDEGYKNKNDPQRSQLFSSLQ
NT seq
7854 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgtaccatcagaatgtcacatgggagacagcctgagatgccgcatttgtaac
aaagttctccctccatgcacatcctttgatcatttatacaaaggtacgtttcgtggacag
tacgtctatattttcaatggaggagaatactacagaccagttggctatgataatatgtac
aagtgcaactactgctttaacaaggaaatcaatgaccaagaaaacctaaggagagaagag
gagagaagaagagaggaagagcagcggagaagagaagaggagagaaaaagagaggaagag
cgaaagaaaagagaagaggagctaaatcaaagactggaagaatcacagcaccaagctaag
gaacagtatgaacaacatctgagaaccaacttatcagaacaagaatccaaaagaaaagtt
ctgaaaggacatttggatgaatttgagtcagacggtgacagtgatgaccttttagagatt
ctctcactgaaatgtggatttgaggttgcagatctcagtctggatgaactttcctctgat
cagctgggaaaggtggtgtcagctttggacaaactcctctttgaggaatgggttcatgct
cttccatccctcaccacactgaagcacacccaagtctacatcacagaactatgtgtgctg
tctgtggaaaaactagaggaagagtcctcacaaaggctttgtgaccacatgcagttcctc
ataggatctatcagccaatcagcaggcagtgcagctgacagtttcctgttgacccaagct
ctgtatcttaccatgatgcacttctacagtgacagcaacagctcggacacagatgcagtc
ctcatagccaaacaatgggcggaagatgagctctcgactgatcttcttttccctgcagaa
ttcctgagcatcctcttatcatcaatgcagaattctgttgaaagagagtctgtgttcatt
ttaaagatggaaatcaaatgcctgaagctgctgttgtccacgctcactgatctacacacc
aaggaaacacactcagagtccactgaaatgatcttaagacttgtgcaagaaaaccagtgg
actccaatggaagcactaaatctgcttaaaggactgtcaaagaaatgtgcagaaaaagct
tcaataactaaattactgatactggtcaaagtgtatgatgtatccccagactggagagat
gactatggacggaccttcactgaagctattgactttgctgcaaacatctctgaagatttc
cccaaaattctcagaaaaagtgatgaaagaaatctccttaaagcccttgcagagttaaaa
tcgtctcaaaatctagatgattccttgactgaaatgataaaaaacatcccaagtggtgtc
ttagtctactctgaacagccacaaaaacagccaacatgcatgagagattcaataaaaagt
ggatctttgagcacagatgacctacagagctgtctgtctctgctgtgcaaagcagttttt
gactcaaaaggctggtggccttcagtgaagcacatgttacaatggtgtgccatgctgctg
aaggagaacacccaagtaccacaactggttggtactgaagaagacccatgcgtgttagct
atgtatgcagctatacaagtctgcaaaggaaacaaactggacattgttctgaactctgat
attgaatcagatcagcagatgaaagagtggtctggcttttataactcccttggaatctcc
tttaacacaaacaagacaacaggaacttcatttaaggatgtttacgaagctgacattgtg
tacggcacattgagtgactttgtgtccgactacattcagcatgcaaaagaggttatggaa
aaccgggttcctccacttcctcgtggattttttattgaagaacaaagtcttgattctttg
gagaatcttgaatttttaaagctaaaaggcaacagtccactggagtttgctgctcaaact
ctgcaaaacatcatgcaaagatgtaaaagtcttgaaatggaaccaaaaagatggtttgtg
aaagctttgtttcaaaaccttcacaataacatgaacaaaggtttgaacaccaaaagtcca
atcatcatcgacatcttgaaaaagctttcaggacagacgctgcagtttaacgagatcttt
atcctgacaattctggagaatctggttcgagtcgtttgtagcgaagcagaagctgagaaa
gaaacggcagcacaagctggcagatggtgtttggaggctctgcttagctgtgcagggcaa
tcccaagatttaaatgaagaaaccaaacagattttggaaatggttttaaatttcagcaga
catgcttggtcaccagttgaattattaaacctgcttggagcattaactcagcaccattcc
actgagggctgcacttccatcatgaagattttacacctgttggaaacataccaggtttct
tccacatggacagatgacagcaatcaaactcttcttgaccttttaggttcttataaaact
gagaaccttatccagcacttggacaagagcctgagagatgaaaaaggcaaaaccattgac
atgctttttgaggaactgcgtcagatgaaagatattgatgagcaaacactgaccaagtct
tacagtattgtaactcatgtcacaaacttgatacaaagtggtgaaattaaaaattacaaa
gatataacgcaggcaaaaactctgagtcagaatatggacaaagagaaccttcaagagatc
cttgcattcttatgcaatgctgttcatcagcaagtagctgatgaaaagtggtggcccaga
gccactcagatgattagctggtgcctcttggccttgtctgacactgggaagctcctggaa
atgggcactggggagggaaagtcttgtgtcattgcaatgtttgcagtgcttcgtgtgttg
aggggagaaaaagtggatgtagtctccagctcgtcagtgttgtgtcaaagagacgcagaa
gaatggggtaaattctttgagcactttggcattacagttgacacaaacacaaacaagact
gaggacagtgaaagaaaagaatgctaccagaaagatgtgatctatggaactatcgaaacc
tttgctgcagatcatcttcgtcagatatttgagatgaaggatgtgaggcctgatcgtaaa
tatcagtgcatcatcattgatgaagtggactctctgctgcttgaccaaggggtgcagctg
acctacttgtccagtcccatggtttgcatgcagcacctcaacactgttcttgccatgatc
tgggctcatgtccgtcagtatggctatgtctcttcaccatatcagtcatttgtgcgaggc
cctccagcttcatttttcaaggccatttatgactcaatcgacacaaaagaaactgaaata
acagacccaattgatattttacgtattgctgaagaaaccaacactgtacccatggggttt
gctgaagaaatctacaatagtaaaccagatgaacttcgtgacaaactgaaaactgtgagt
aaagatacagcagttaacttctttaaagaactggaaaactatgttccctatggctttact
gtctatactttgaatgagaaaggattgctttctcttgagaaactcagcccttatgataaa
aactcaattccagaactaacatttctggtcatggaggaagggttttgttgttctctttac
gactctgatgaaattctagttcagccaatagctgatacgatctccgagaaaattcagtac
accccatgcacaaacaacaaagatgaaatccgcattcctggattcttgaagaacttgatt
ggtgaaaaaatgtccgtgtggactcagaatgcatttctggctttgcaactaagagaggga
cgagattacgttgtagaaaacaatcatgtttgtccagtggatttcagatccacagggatc
gtggaactaaataagaaatggggagatggtctccagcagtttgttgagatcaaacaccaa
atcaaactcagcacaatttcaactgtgacaaactacatttccaacgttgcattctttgaa
aagtaccaggggaaaatctatggaacgacaggaactcttggcagtgaaaaagacattctg
tttctgaagaacctttacccaaacctgactgcctgcaaaatgccagcattcaacagaaag
aagttatttgaagtcgaaggaaaagtgacaacctcatctgaagagtggaaatcggaaata
aagcatgtggtgatggctcaggtctccaaaaattcctacagggatggaagagcggctctg
ataatctgtgaaacaatcaacaaagccaaagagatctatgacgatctaaaaagctgtgtc
tcaggtgatatcattctctactgccgaagcgacaatgacagcttgagcaaaatagaaaaa
acacttcttcctggagatgttatagttgccaccaaccttgccggacgaggaacagacata
aaggtttccaaagacgtgaacaataacggggggttatttgtgatcctctcgttcctttca
gacaacacaagagtggaacttcaggcctttggtcgaacggctcgcaaaggcaaacctgga
tctgcccagatcttcatgtccactgaacaccttcagcgaggtttcaagacagggacctct
ctagaggaagcgaagagtacaagagacacacttgcagaagaaagaatacgttgcatgatg
gatgatgtccatgaaatgaaattaagggaagaacttttctcagactactgcaaaactctt
caagaagttcacaagatttcagatgaagatgaaaaacgagttatgatagatatcatgaat
gagttctggggcatttggctgcaaattaaatcagaagacattgaccagttgaaaatggag
gaactgaaacaaagtctgaaggctgatttggcagaggcaagagatcagtctcaaaagcag
gaatccccatgttcaagcatttatcactttataaagtttggaaatgttgcacttgatgat
aagaaatgggaccttggagccagtctctttcagaaagccatggaccaggataaaagctgg
gcagcaattgcttcttacaatcatgcttactgtactattatgcagaggaagaataactat
ctaaaaaatgccagagaagatctgaagaaagcagaggagtccttacagtgccttagtgag
gagtctatgatctgtttgcagtttgtgaagatgggttctgttgaatcaaccaagaatgaa
caaacaagtctggaaaaacaattgacaactagatgcaacatgtatgaaacatggggtaaa
aacatatctgaggccattaagaagttagatgagatcatagagaaggataaaaatgctgtg
gccaagaaatctccagttttctcattgatttcaagtgctgatgaagaactccaagttgaa
gcttacagcctctacaaaggtggtctgcagtatgcatttgctgttgaacaagagccctcc
atttgggaagctattttggtgttttttcttggagtcttacagattgttgctggagttctg
cttgctgtcttcacttgtggagcactagctcaagttggctttggactcatttctgaagga
gtgtcagactgcatctatggcatcgaggccctagtgacaggagagttcagctggaaagac
tgggctatacagaaagccatttccgtcggtgtgtcactcattacattcggagttggaaag
ttggtttctaaaggcttaaaagcttgcaaaatggcattgaaacacttgggcaaaaaactg
aaggcacttccaaagctaatctccaaacatgctaaagacagtatgagtgctgtcacaaag
acaaacctaaaaaatgcagtaaaagaggccagtaaaaaaatagggaaagaaatatttttc
caagggcttggaaaggcagaggaagaaataatgaaacagatattaaaaagtataaaaaat
gatctgaccaagacaatcacaaatggcgttgaatccaacttagagaaagacccactgagt
tctttagtagattctaccattgtcctacacctggtagataaggaacaacttaaagagctc
ctcaatgatgaaaagagaaaagctaatctccttgaagttttcaaaaagttaagcaaaact
gcactgcagccattctatgcagaccttagttggcagaacaagctcaactcatccattatc
aaagtgatagacagagctaaagaagaggccaaaggaaaagtcaaagtattttttcaagtc
attcaagctgcacatctttcgatactagcagctgatgctgttgcggcagtatcaactatc
tccacaaaattcttctcaaatcttcaaaaggagctagaatcattcaaacaaaatacaaat
attacagaaaaagtgaaagaaaatgagctttcagcttcagactcagagattttgaaatca
ctcaagcaagatatagccaatgctatttctgaattactggctgatgctatggtggaggtt
tttaaccagaagttctccggtcacatcatttctcaagtacaagataaggtgaatggggcc
cttggagaatacattaaaaaaggcttcaagagagcagaagacaagcttaaagctgcacgc
agttcaactgcagacatgactgttaatccagattctcaactctcaaggtcttatgcagag
aagatcaaaagccctggcagtggggggaccatccttgatgtgagagttctgtcagaggct
acaggaactaaagttgtcatcctaactgagaataaacatggaagtcttactaaaatgcag
gaagtaaacccacgcagcaaaacctctgatcagacagtaacactgatctacagaccaaag
agtgacaaacatcctgatggtcattttgacacttacattgataacaagatagtgatcacc
aacagcaatggaaagagcagcctgtttttggctttggcaagagccagaaaaccaacagcc
aatgaagtagagatctcacaagaagctgattacttacgatctgcggaggccaagacttta
cttcaacgtcccagtcagtggggatctttcatcaagcacaagcagtgggttgaaagactc
agagatagtgactggtacatcccagagggaagtagaccaaaacagatcatgaataaaatc
cagacaagtcttaatacacaagttggagaaataaattactacataaaatggcaaaaacac
taccctcaaaatccaaaaatgacacaaatctttaacacagatcaccaacctccacccaat
agtatcctggaagctagtcaagttaaccagaacagcagactggccaaggccatgcttgag
gtaggaccaaaaccctcaacctttgacagtgtggatgtaaatgctgatgtggagaaacat
catggcctacaacttcagaacactggtgcacttcaaggaaaaaatcagaactttccagca
ggaacatctgaaaaattcacaacattactcaccactgccatcagcagggatgatgttgag
agcaccttcaaactgatggtcattggtgcagcagtggactatggtcatgtcagcggtggc
agcaacttcaagagttctcagaacctgaagaagagtaaaaccaggctctctagctttgaa
aagagagttcaagaaaacagcagagatatggtggagaagtggtttggcctgcttcaaggt
aaagatgtcatgacccaagaacaacttaacaccatcactgcttggatcaaagatgaggga
tacaagaacaagaatgatcctcagaggagccagttgttcagttctctacagtaa
DBGET
integrated database retrieval system
