Oryzias latipes (Japanese medaka): 111949087
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Entry
111949087 CDS
T02443
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
111949087
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111949087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_10
Prok-RING_4
zf-RING_6
RSS_P20
Exonuc_VII_L
Gp58
ToxN_toxin
MRP-S31
DivIC
zf-ANAPC11
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
111949087
NCBI-ProteinID:
XP_023821162
LinkDB
All DBs
Position
17:complement(9342460..9344333)
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AA seq
554 aa
AA seq
DB search
MAQKGVDLDQETFSCSICLDLLKDPVTIPCGHSYCMKCIQGFWDEEEKIHSCPQCRKTFT
PRPVLEKSTMLAALVDQLKKTGLQSAPADLCYAGPEDVVCDVCAGRKLKAIKSCLICLAS
YCEKHLQPHLDAAAFKKHKLVEPSKNLQENICSRHDEVMKMFCRTDQKCICYLCSVDEHR
GHDTVSAAAERTERQRELEESQQQIQQRIQDREKEVKLLQQEVEAINHSADQTVKDSEKI
FTEMIRLIQKRSCDVKQQIRSQQQTEVSRVKDLQEELEQEITELKRRDAELKQLSLTEDH
SQFLLNYPSLPPLSESTHSSSINVRPLRYFEDVTAAVSELRDKLQDILREEWTNISLTVT
HVDVLLPEPEPEPKSRADFFKYSCQITLDPNTANSQLLLSEENRKGTVMEQPQSDSDHSD
RFTGWFQVLSRENLTGRCYWEVECRGDFVSLAVAYKNISRSGNESRFGYNDKSWSLFCSP
NSFSFNHNSKKYSMSAPVSFRVGVYLDHRAGVLSFYSVSDSMTLLHRVQTTFTQPLHAGL
WLGYGATAEFCKLK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttgatctggatcaagaaaccttcagctgttccatctgtctggat
ctgctgaaggatccggtgactattccctgtggacacagctactgcatgaagtgtattcaa
ggattctgggatgaagaggagaaaatccacagctgtcctcagtgcaggaagaccttcaca
ccgaggcctgttctggagaaaagcaccatgttagcagctttagtggatcagctgaaaaag
actggactccaatctgctcctgctgatctctgctatgctggacctgaagatgtggtctgt
gatgtctgcgctggaagaaaactgaaagccatcaagtcctgtttgatctgtctggcctct
tactgtgagaaacaccttcagcctcatttggatgcagctgcattcaagaaacacaagctg
gtggaaccctccaagaacctgcaggagaacatctgctcccgtcatgatgaggtgatgaag
atgttctgtcgcactgatcagaagtgtatctgttatctctgctctgtggatgaacataga
ggccacgacacagtctcagctgcagcagaaaggactgagaggcagagagagctggaggag
agtcaacaacaaatccagcagagaatccaggacagagagaaggaggtgaagctgcttcaa
caggaggtggaggccatcaatcactctgctgatcaaacagtgaaggacagtgagaagatc
ttcactgagatgatccgtctcatccagaaaagaagctgtgatgtgaagcagcagatcaga
tcccagcagcaaactgaagtgagtcgagtcaaagatcttcaggaggagctggagcaggag
atcactgagctgaagaggagagacgctgagctgaagcagctctcactcacagaggatcac
agccagtttctgctcaactacccctcactgccaccactcagtgagtccacacactcatcc
agcatcaatgtccgtcctctgagatactttgaggatgtgacagcagctgtgtcagagctc
agagacaaactgcaggacattctgagagaggaatggacaaacatttcactgacagtcact
catgtggatgttttactgccagaaccagaaccagaaccaaagagcagagctgacttcttc
aaatattcatgtcaaatcacactggatccaaacacagcaaacagccaactgttactgtca
gaggagaacagaaaggggacagtgatggaacaacctcagtctgattctgatcattcagac
agatttactggttggtttcaggttctgagtagagagaatctgactggacgttgttactgg
gaggtggagtgcagaggagactttgttagtctagcagtcgcatacaagaacatcagcaga
tctggaaatgaaagtagatttggttataatgataaatcttggtcattattttgttctcca
aacagtttctcctttaaccacaacagcaaaaaatattctatgtcagctcctgtttccttc
agagtaggagtgtacctggatcacagagcaggtgttctgtccttctacagcgtctctgac
agcatgactctcctccacagagtccagaccacattcactcagccgctccatgctggactg
tggttgggttatggagccacagcagagttctgtaaactcaaatag
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