Oryzias latipes (Japanese medaka): 111949089
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Entry
111949089 CDS
T02443
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
111949089
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111949089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
U-box
Prok-RING_4
zf-RING_6
MRP-S31
Gp58
V_ATPase_I
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
111949089
NCBI-ProteinID:
XP_023821164
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Position
17:complement(9413428..9415539)
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AA seq
552 aa
AA seq
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MAQKGVDLDQETFSCSICLDLLKDPVTIPCGHSYCMKCIQGFWDAEEKIHSCPQCRKTFI
PRPVLVKNTMLADLVDQLKKTGLQAAPADLCYAGPEDVVCDVCTGRKLKAIKSCLICLAS
YCEKHLQSHLDAAAFKKHKLVEPSKNLQENICSRHDEVMKMFCRTDKKCICYLCSVDEHR
GHDTVSAAAERTERQRELEESQQQIQQRIQDREKEVKLLQQEVEAINHSADQTVKDSEKI
FTEMIRLIQKRSSDVKQQIRSQQQTEVSRVKDLQEELEQEITELKRRDAELKQLSFTEDH
SQFLLNYPSLPPLSESTHSSSINVRPLRYFEDVTAAVSELRDKLQDILREEWTNISLTVT
HVDVLLPEPEPKSRADFFKYSCQITLDPNTGNRQLLLSEENRKVTVMEKPQSESDHPDRF
TDWFQVLSRESLTGRCYWEVERRGTGVCVAVANKNISRSGDESGFGLNDKSWSLVCFPDS
FSFHHNNIKYSISAPVPSRVGVYLDHRAGVLSFYSVSESMTLLHRVQTTFTQPLYAGLGL
GYGVTGEFCKLK
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttgatctggatcaagaaaccttctcctgttccatctgtctggat
ctgctgaaggatccggtgactattccctgtggacacagctactgcatgaagtgtattcaa
ggattctgggatgcagaggagaaaatccacagctgtcctcagtgcagaaagaccttcata
ccgaggcctgttctggtgaaaaacaccatgttagcagatttagtggatcagctgaagaag
actggactccaagctgctcctgctgatctctgctatgctggacctgaagatgtggtctgt
gatgtctgcactggaagaaaactgaaagccatcaagtcctgtttgatctgtctggcctct
tactgtgagaaacaccttcagtctcatttggatgcagctgcattcaagaaacacaagctg
gtggaaccctccaagaacctgcaggagaacatctgctcccgtcatgatgaggtgatgaag
atgttctgtcgcactgataagaagtgtatctgttatctctgctctgtggatgaacataga
ggccacgacacagtctcagctgcagcagaaaggactgagaggcagagagagctggaggag
agtcaacaacaaatccagcagagaatccaggacagagagaaggaggtgaagctgcttcaa
caggaggtggaggccatcaatcactctgctgatcaaacagtgaaggacagtgagaagatc
ttcactgagatgatccgtctcatccagaaaagaagcagtgatgtgaagcagcagatcaga
tcccagcagcaaactgaagtgagtcgagtcaaagatcttcaggaggagctggagcaggag
atcactgagctgaagaggagagacgctgagctgaagcagctctcattcacagaggatcac
agccagtttctgctcaactacccctcactgccaccactcagtgagtccacacactcatcc
agcatcaatgtccgtcctctgagatactttgaggatgtgacagcagctgtgtcagagctc
agagacaaactgcaggacattctgagagaggaatggacaaacatctcactgacagtcact
catgtggatgttttactgccagaaccagaaccaaagagcagagctgacttcttcaaatat
tcatgtcaaatcacactggatccaaacacagggaacagacaactgttactgtcagaggag
aacagaaaggtgacagtgatggaaaaacctcagtctgaatctgatcatccagacagattt
actgattggttccaggttctgagtagagagagtctgactggacgttgttactgggaggtg
gagaggagaggaacaggtgtgtgtgtagcagtcgcaaacaagaacatcagcagatctgga
gatgaaagtggatttggtttaaatgacaaatcttggtctttagtttgttttccagatagt
ttctcatttcaccacaacaacataaaatattccatctcagctcctgttccctccagagta
ggagtgtacctggatcacagagcaggtgttctgtccttctacagcgtctctgaaagcatg
actctcctccacagagtccagaccacattcactcagccgctctacgctggactggggttg
ggttacggagtcacaggcgagttctgtaaactcaaataa
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