Oryzias latipes (Japanese medaka): 111949113
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Entry
111949113 CDS
T02443
Name
(RefSeq) nucleolar transcription factor 1-A-like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
111949113
03021 Transcription machinery [BR:
ola03021
]
111949113
Transcription factors [BR:
ola03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
111949113
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
111949113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
Motif
Other DBs
NCBI-GeneID:
111949113
NCBI-ProteinID:
XP_023821426
LinkDB
All DBs
Position
17:10868048..10876833
Genome browser
AA seq
703 aa
AA seq
DB search
MNGGGSVSTAQSARTKADTDNWSKEDCLTLLERIRSLLPDGDAMKYKTTESHFDWEKVCF
GSFTGDMCRQKWQKVSTEVRKYRTMTELIVDAIEFVKNPYKGKKLKTHPDFPKKPLTPYF
RFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPEKKKQKYITEFQREKEEFEKNMTRFK
EEHPELIEERKKSDLPEKPKTPQQLWYNHEKKLYMKVHPEVSQKELKEALRRQWSQLSDK
RRLKWISKALELQKDYKGSMRAYHEAHPDVNSDDPVRSVLTKAERQLKDKFDGRPTKPPP
NGYSLYCAELMVNMKDVPSTERMVLCSKQWKMMTQKEKDMFQKRCEQKKKQYDIDLQRFL
ESLPDEERDRVLGEEKMGGSKGTVASSPHRAKSPSVKERTREVEPESWVPPGPPKDRRDG
KKTVKLPETPKTAEEMWQHSVIGDYLAKYRSDRRKAQVAMEAAWKSMEKKEKIPWIKKAA
EDQKRYEVQYRPVRELLEMRSPAAGQRKPKFDGEPKKPPVSGYQMFSQELLTNGELNHFS
LKERMVEIGKRWQKLSQTQKDKYKKQVEEQQVEYKAELEAWVKSLSVQDRAAYKEFSSSK
RRSTTKVRSSPVAKVRVTAKGKASGSRPAPPAVTVNKRAMAYRAKQDMSDSDEEEEKSDS
TESDDDDETSGSSDSEDDDENDDDEEDDDDQSSSEESSDSDSD
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggcggcagcgtctccacagcgcagagcgccaggaccaaggcggacacagat
aactggagcaaggaggactgcctgactctgttggagaggatccgcagtctcctgccagac
ggagacgccatgaaatacaaaaccacagagtctcactttgactgggaaaaagtgtgtttc
ggcagcttcaccggagacatgtgtcggcagaagtggcagaaggtctcaacagaggttcgg
aagtacagaacaatgacagagctcattgtggacgccatcgaatttgtcaagaacccgtac
aaagggaaaaagctgaagacacacccagatttccctaagaagcccctgactccatatttt
cggttcttcatggagaaaagagccaaatatgccaaaatccacccagagatgagcaacctg
gacttgacaaagatcttgtctaagaagtacaaagagctcccagaaaaaaagaagcaaaag
tacatcacagagtttcagcgggagaaggaagagtttgagaaaaacatgacgcgttttaag
gaagaacatccagaactcatcgaggaaaggaagaagtcggacctgccggaaaaacccaaa
accccccagcagctgtggtacaaccatgaaaagaagctctacatgaaggtccacccggag
gtgagtcagaaggagctgaaggaggctctgaggaggcagtggtcccagctctctgacaaa
aggagactcaagtggattagcaaagccctggaactgcagaaggactacaagggcagcatg
agggcgtatcacgaagctcacccagacgtcaactcagacgatcccgttcgctccgtcctc
accaaggccgagagacagctaaaagacaaatttgatggccggccgacaaagcctccaccc
aatggctactctctgtactgcgctgagctgatggtgaacatgaaggacgtccccagcaca
gagcgcatggtgctgtgcagcaaacagtggaagatgatgacgcagaaggagaaggacatg
ttccagaagcgctgcgagcagaaaaagaagcagtacgacatcgacctgcagcggttcctt
gagagtcttccagatgaagaacgagacagagtgctgggagaggagaagatgggtggttcc
aaagggaccgtagcctcaagcccacatcgagcaaaatctccatcagtgaaggagcgtacc
cgtgaagtggagccagagtcgtgggtaccccccggaccacccaaagatcggcgggatggt
aagaagacggtgaagcttccagagacgccgaaaacggctgaggagatgtggcagcacagt
gtaattggagactacctggctaaatacagaagcgatcgcaggaaggcccaggtggcgatg
gaggcagcctggaaatcaatggagaagaaggagaagattccatggatcaagaaagcagca
gaggaccagaagcgttacgaggttcagtaccgacccgtgagggagctgttggagatgaga
tctcctgcagctggacagaggaagcccaagtttgatggagaacccaaaaaacctccagtg
agcgggtatcagatgttctcccaggaactgctgaccaatggggaactaaaccacttcagc
ttgaaggagcgcatggtggagatcggcaaacgctggcagaagctgagccagacccagaaa
gacaagtacaagaagcaggtggaggagcagcaggtggaatacaaggccgagttggaggcc
tgggtcaagtctctctctgttcaagatcgagcggcctacaaagagttctcctcctcgaaa
cgtcgcagcactacaaaagtccgcagtagtcctgtggccaaagtccgcgtcacagcaaag
gggaaggccagcggatcaagacccgcccctccggctgtcaccgtcaacaaaagggcgatg
gcgtatcgggccaagcaggacatgtccgactctgacgaggaagaggagaaaagtgactcc
acagagtctgatgatgacgacgaaacttcaggaagctcagacagtgaggatgacgatgag
aacgatgacgatgaagaggatgacgatgatcagagttcgtcggaggaatccagcgattca
gactccgactag
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