Horticoccus luteus: K0B96_02950
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Entry
K0B96_02950 CDS
T07405
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ole
Horticoccus luteus
Pathway
ole03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ole00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K0B96_02950 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ole03019
]
K0B96_02950 (recQ)
03400 DNA repair and recombination proteins [BR:
ole03400
]
K0B96_02950 (recQ)
Enzymes [BR:
ole01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K0B96_02950 (recQ)
Messenger RNA biogenesis [BR:
ole03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K0B96_02950 (recQ)
DNA repair and recombination proteins [BR:
ole03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K0B96_02950 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
EccE
Motif
Other DBs
NCBI-ProteinID:
QYM79592
UniProt:
A0A8F9TXY7
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Position
complement(747252..749078)
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AA seq
608 aa
AA seq
DB search
MPDLLPTLKTTFGYSSFRPLQREICEATLGGRDVFALLPTGGGKSLCFQLPALVRPGLTV
VVSPLIALMKDQVDQLQASGVAATFLNSTLAADESRRRLRGLHRGEWRLLYVAPERLMLD
GWQENLKQWHVSCLAIDEAHCVSEWGHDFRPEYRQLAKLRKLLPEVPLMALTATATERVR
VDIIKHLQLHDPAVFVASFNRPNLTYRVVPKDQPIKQVIDFVRKREGESGIIYCASRAAA
ERVAESLAGRGFAARAYHAGLDGEERARNQEAFLRDDTRIICATIAFGMGINKPNVRWVI
HHDLPKNIEGYYQETGRAGRDGLPGDCLLLFSAGDIAKQTHFLDEITNPHEQQVARAQLR
QIVHYAESAGCRRAELLAYFGETFPLDNCAACDNCLEPRETYDGTLAAQKFLSCVYRIRQ
NSRFNVGMNHIIEVLTGADTDKIRRWEHDRLTTYGIGREFSRPQWSAVGRELMRLGFLAV
AEGEFATLELTSAGMNVLRTRSAVTLTKPMDLPKAKRAVRREGEIACDDLLFERLRALRK
KLADERSVPAYIIFGDTTLRAMARYYPVTSAAMEGIPGMGEKKRAEFAATFATAIADYLA
THSRLSFD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacctgcttcccacgctcaaaaccactttcggctattcgtcgtttcgcccgctg
caacgcgagatttgcgaagccacgctcggcggccgcgacgtgtttgcgctgctccccacc
ggcggcggcaaatccctttgcttccaacttccggcgctcgtgcgccccggcctcaccgtc
gtcgtctcgcccctcatcgcgttgatgaaggatcaggtcgaccagcttcaggccagcggc
gtcgccgccacgttcctcaactccacgctcgccgccgacgaatcccgccgccgcctccgc
ggccttcaccgcggcgagtggcgcctgctctacgtcgcgccggagcgcctcatgctcgat
ggctggcaggaaaaccttaaacagtggcacgtctcctgcctcgccatcgacgaagcccac
tgcgtctccgagtggggccacgatttccgccccgaataccgccagctcgcgaagttgcgc
aaactcctccccgaggtgccgctcatggccctcaccgccaccgcgaccgaacgcgtgcgc
gtcgacatcatcaaacacctgcaactgcacgaccccgccgtcttcgttgccagtttcaac
cgccccaacctcacctaccgcgtcgtccccaaggatcagcccatcaagcaggtcatcgat
tttgtgcgcaaacgcgaaggcgagagcggcatcatctactgcgccagccgcgccgccgcc
gaacgcgtcgccgaatcgctcgccggccgcggcttcgcggcccgcgcgtatcacgccggc
ctcgacggcgaagagcgcgcccgcaaccaagaggcgtttctccgcgacgacacccgcatc
atttgcgcgacgatcgccttcggcatgggcatcaacaagcccaacgtccgctgggtcatc
caccacgaccttccgaaaaacatcgagggctactatcaggaaaccggtcgcgccggccgc
gacggcctgcccggcgactgcctcctgcttttcagcgcgggcgacatcgcgaagcaaacg
catttcctcgacgagatcaccaatccccacgaacagcaggtcgcgcgcgcccaactccgc
cagatcgtccactacgccgagagcgccggctgccgccgcgccgaattgctcgcctatttc
ggcgagactttccccctcgataactgcgccgcctgcgacaactgcctcgaaccacgcgag
acctacgacggcacgctcgcggcgcagaaattcctctcctgcgtttatcgcatccgccaa
aacagccgcttcaacgtcgggatgaatcacatcatcgaagtcctcaccggcgccgacacc
gataaaatccgccgctgggaacacgaccggctcacgacctacggcatcggtcgcgagttc
tcccgcccgcaatggagcgccgtcggccgtgaactcatgcgcctcggtttcctcgccgtc
gccgaaggagaattcgccactctcgaactcacatccgccgggatgaatgtcctgcgcacc
cgctcggccgtcacgctcaccaagccaatggacctgccgaaggcgaaacgcgctgtgcgc
cgtgaaggcgagatcgcgtgcgacgacctgctcttcgaacgcctccgcgccctgcgcaaa
aaactcgccgacgaacgcagtgtgcccgcttacattatttttggcgatacgaccctccgc
gcgatggcgcgctattacccggtcacctccgccgcgatggaaggcatccctggcatgggc
gaaaagaaacgcgccgaattcgccgccaccttcgccaccgccatcgccgactacctcgcg
actcactcccgcctctcgttcgactga
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