Horticoccus luteus: K0B96_04660
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Entry
K0B96_04660 CDS
T07405
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ole
Horticoccus luteus
Brite
KEGG Orthology (KO) [BR:
ole00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ole03032
]
K0B96_04660
03400 DNA repair and recombination proteins [BR:
ole03400
]
K0B96_04660
Enzymes [BR:
ole01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K0B96_04660
DNA replication proteins [BR:
ole03032
]
Prokaryotic type
DNA Topoisomerases
K0B96_04660
DNA repair and recombination proteins [BR:
ole03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K0B96_04660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QYM79914
UniProt:
A0A8F9XMC9
LinkDB
All DBs
Position
complement(1167581..1168735)
Genome browser
AA seq
384 aa
AA seq
DB search
MARRIRPPATPPARRRAPPPHPANEAILAAREAGLRYVADTRPGLSRRRAGRSFAYRDAA
GRPIHDTATLARIKHLAIPPAWRDVWICASPHGHIQATGRDMRGRKQYRYHPDWRAVRDE
TKYERVIAFGRALPAIRRRVARDLRLPGLGRRKVLAAMVRLLETTLIRIGNDEYARENRS
FGLSTMQDRHAKIKGGLIHFEFRGKSGRQHQIDLREPRLAKIVRQAQDLPGQELFQYRDD
AGAVQDVASDDVNAYLREIAGDDFSAKDFRTWAGTVIAALALREFERFDTKAQAKKNLVR
AIERVAERLGNTPAVCRKCYIHPVVMESYLDGATVKQLEQRTEAALRGGLRGLTAEEGAV
LAFLQARLAAPPRAPARRATRRTR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgcatccgcccgcccgcaacgcccccggctcgtcgccgcgcgcctccgccg
catccagccaacgaggctatcctcgccgctcgcgaggccggcttgcgctacgtcgccgac
actcgccctggcttgtcccgtcgtcgcgccggccgctcctttgcctatcgcgacgccgcc
ggtcgccccatccacgataccgccacgctcgcccgcatcaaacacctcgcgattcccccg
gcttggcgcgacgtatggatttgcgcctcgccgcatgggcacatccaagccaccgggcgc
gacatgcgcgggcgaaagcaatatcgctatcatcccgattggcgcgcggtccgcgacgaa
acgaaatacgaacgcgtcatcgccttcggtcgcgccctccccgccatccgccggcgcgtc
gctcgcgaccttcgcctgcccggcctcggccgccgcaaagtgctcgccgccatggtccgc
ttgctcgagaccaccctgatccgtatcggcaacgacgaatatgcccgtgaaaaccgctcg
ttcggcttgagcacgatgcaggaccgccacgccaaaattaagggcggcctcatccatttc
gaattccggggcaaaagcggccggcaacaccaaatcgaccttcgcgaaccacgcctcgcg
aaaatcgtccgccaggcgcaggacctcccgggccaggaactctttcaatatcgcgacgac
gccggggcggtgcaggatgtcgcatccgacgacgtcaacgcctacctccgcgaaatcgcc
ggcgacgatttttctgcgaaggactttcgcacctgggccggcaccgtgatcgcagccctc
gcgttgcgcgagttcgagcgcttcgacacgaaagcgcaggcgaaaaaaaatctcgtccgc
gccatcgagcgcgtcgctgagcggctcggcaacacccccgccgtctgccgcaaatgttat
atccacccggttgtgatggagagctacctcgatggcgcgacggtgaaacaactcgagcag
cgcaccgaagcggcgttgcgcggcggactgcgcggactcactgccgaggaaggcgccgtg
ctcgcgtttctgcaggcgcggctcgcggctccgccccgtgcgcccgcccgacgcgccacg
cgccgcacccgctga
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