Horticoccus luteus: K0B96_08085
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Entry
K0B96_08085 CDS
T07405
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ole
Horticoccus luteus
Pathway
ole03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ole00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K0B96_08085 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ole03021
]
K0B96_08085 (rho)
03019 Messenger RNA biogenesis [BR:
ole03019
]
K0B96_08085 (rho)
Transcription machinery [BR:
ole03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
K0B96_08085 (rho)
Messenger RNA biogenesis [BR:
ole03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K0B96_08085 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA
AAA_22
AAA_25
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QYM80788
UniProt:
A0A8F9TYY1
LinkDB
All DBs
Position
1935375..1937072
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AA seq
565 aa
AA seq
DB search
MEAAPSESRPEDAPRRDESAGGNGPGSDTNRGNGGGAPAGESGAGHSQHGDRGQPGGDNY
GGGEQGGGYWKQRRRDKRKRGRHGGQPWQPGPGGGGGGGGQHFQPKPPQPPPPNFAPTFG
DLPDPAGFNDLAALDRRADEIATGGSPIFIDELYALNHADLTALARANGVHFDGVPTRLQ
MLEGVFKMAAEQKRELRDRGWLDLTDRGYGFIVHKSVNYRLYPENTYVPESLVHRYGLKR
GHEIEVRVQAPHGDERCPSAVRIESVMGAAPEQIASLTPFEELIPYYPLKRILLEAPEVQ
KDVSMRAVDILTPIGFGQRGLIVAPPRTGKTVLLQNIANSVSENFPEAKLILLLIDERPE
EVTDFKRHTKGEVVSSTFDESPESHVHAAEMVGEKARRLVEQGEHVVILLDSITRLARAY
NALTGNQGKTMSGGLESNALQKPKRFFGAARNIEGAGSLTIIGTALIDTGSRMDEIIFEE
FKGTGNSELHLDRGLVERRIFPAINIDRSGTRKEELIYHPDELQRIHGLRRAMQGLGPIE
SMEMLITRLKKTNSNAEFLLALGKQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgccatctgagtcccgacctgaggacgcgcctcggagagacgaatcagcc
ggcggcaacggtccgggatcggacaccaaccgcggcaacggcggcggcgcgccggcgggt
gagagcggcgcgggacattcgcaacatggcgaccgtggccaaccagggggcgacaactac
ggcggcggcgaacagggcggcggctattggaagcagcgtcggcgcgacaaacgtaaacgc
ggacggcacggcggtcagccatggcagcctggtccgggcgggggtggcggcggcggcggg
cagcattttcaaccgaagccaccgcaaccgccgccgccgaatttcgcgccgacgttcggc
gatttgcctgatccggcgggattcaacgatctcgcggctctggatcgtcgcgcggacgaa
atcgcgaccggcggttcaccgattttcatcgatgagctttacgcgttgaaccacgccgat
ctgacggcgttggcgcgggcgaatggcgtgcactttgacggcgtgcccacgcgtctgcag
atgttggaaggcgttttcaaaatggcggccgaacagaagcgcgaactgcgcgatcgcggc
tggctggacctcaccgatcgcggctacgggttcatcgtgcacaagagcgtgaactaccgg
ctttatccggagaacacgtatgtgccggagagcctcgtgcatcgctacgggttgaagcgc
ggacatgaaatcgaagtgcgcgtgcaagcgccccacggtgatgagcgctgcccgtccgcc
gtgcggatcgagagcgtgatgggcgcggcgcccgagcaaatcgcgagcctcacgccgttc
gaggaactgattccttattatcccctcaagcgcatcctgctcgaagcgccggaggtgcag
aaggacgtgtcgatgcgagcggtggacatactgacgccgatcggcttcgggcaacgcggt
ctgatcgtcgcaccgccgcgcaccggcaaaacggtgttgctgcaaaacatcgccaactcg
gtgtccgagaattttcccgaggcgaaactgatcctgctgttgatcgacgagcggccggag
gaagtcacggatttcaagcggcacacgaagggcgaagtcgtatcgtcgaccttcgatgag
tcgccggagagccacgtgcacgcggctgaaatggtgggcgaaaaggcgcggcgactggtg
gagcagggcgaacacgtggtgatcctgctcgactcgatcacgcgtctcgcgcgcgcctac
aacgcgctgaccggcaaccagggcaagacgatgtcgggcggtctcgaatcgaacgcgttg
cagaagcccaaacgtttcttcggcgcggcgcgcaacatcgagggcgcgggcagcctcacc
atcatcggcaccgcgctgatcgatacgggcagccgcatggatgaaatcatcttcgaagaa
ttcaagggcaccggtaacagcgagctgcatctcgaccggggtttggtcgagcgccggatt
ttcccggcgatcaacatcgaccggtcgggcacgcgcaaagaagagctcatttaccatccc
gacgagttgcagcgcatccacggtctgcggcgcgcgatgcagggtctcgggccgatcgag
tcgatggagatgctgatcacgcggctcaagaagacgaacagcaacgcggagttcctcctc
gcgctcgggaagcaataa
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