Horticoccus luteus: K0B96_14510
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Entry
K0B96_14510 CDS
T07405
Name
(GenBank) DUF3418 domain-containing protein
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
ole
Horticoccus luteus
Brite
KEGG Orthology (KO) [BR:
ole00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ole03019
]
K0B96_14510
Enzymes [BR:
ole01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
K0B96_14510
Messenger RNA biogenesis [BR:
ole03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
K0B96_14510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
SRP54
AAA_22
nSTAND3
AAA_30
TsaE
ABC_tran
HA2_N
NACHT
AAA_25
ResIII
Motif
Other DBs
NCBI-ProteinID:
QYM78497
UniProt:
A0A8F9TVT5
LinkDB
All DBs
Position
complement(3567435..3571724)
Genome browser
AA seq
1429 aa
AA seq
DB search
MPPNPPTSFPFRLDFPPELPISARAEEIVATLQEQQVLILAGETGSGKTTQIPKLCLAAG
RGTQGRIACTQPRRVAALSVSKRVAEELNVAWGREVGCKIRFADQTSRETVIKFLTDGML
LAEVQGDPLLRAYDTIIIDEAHERSLNIDFLLGHLRTLRFKRPELKIIITSATIDTQMFS
EAFDGAPVIEVSGRTYPVEVIYAPLDALGGDFSEEQPGAEDAGARAAHRAEALHYIDGAV
EAVRRIVDDSTAGDVLVFMPSERDIRETCEALDGALGRGCELVPLFGRLTNAEQQRVFAP
VPKRKIIVATNIAETSLTIPGIRFVVDTGLARLSRYSPQARTRRLPIEPVAQSSADQRKG
RAGRVAEGVCVRLYSEADFLERPRFTQPEIQRANLADVILRLKAFGLGDIERFPFINPPA
TKAIRSGYALLEELGALAEEGAAAADGGDARARDARKAGAEDPPHGRLLTGEGTRPTSSS
ASGNGGGSGTRELTAIGRELARLPVDPTVGRMILQARTEKCLREVLVIAAGLSIQDPRER
PLEKQAAADAAHRRFRHGDSDFLTLLNIWEAYHGEFETMAQSKLRRFCREHFLSYTRMRE
WRDVHAQLADVLRERANLRMSSVADGMPVAPAGEGGKETKATRLPLRGADRERGKDPLAW
GTPAYRAIHRSVLAGLLGNIAYYDEDNRIYKATHDRRVTLFPGSVLANRGDTKKAPGGGE
AKAKRAAKPPAWIMAAEVVETSRLFARTCARLDPAWVLELASHLIKQSHSEPFWNEEKGR
VMVKQRSRLYGLELDVRAVSFGRIDPVRATEIFIREGLVNDTITWPLDFIAHNRALREQV
ETSLTRTRDSSFLNLDEAFYRFYAERLRGDAVEREQWGEGTPPTVRAAQQGVSSVAELVD
LVRRRQATEPRFLMMELADLRDPETLQHDAAEFPAVLPLTNQVLPLAYTYKPGQPDDGVT
LDVHARDAAALTPAALDWAVPGHLAAKVEHYLGVLPKDVRRVLIPFADTVRSVSEQVAQR
DRLTDRRETLPEALAAVLAERFNVRVAPDFWSDKPPPEHLRVRLRVHDDTGRELASSREL
AEVRAALKQPAPAAGANAAQQEPEVWRRARARWEKPAQATWAFGAVPDRVQIGDQAGVAI
YAFPGLRAEADGVALRLFRAAEEAERETRRGVSRLLEDALSRDLGWLERDLRRLRELGAL
VASIAPAEALQADAFLALRRWLIERTPPRLTEEGFAATLRQARADLQGGVPRLVALLREI
LTLRQALLVHPQPYAGLAAELEQLVPADFLRHTEFPRLENFPRYLKGMTLRAERWRKNPA
KDAERAKELAPLVAAVAKRSREDPVRWLVEELRVSLFAQELGTAEPVSVVKVQRALQESG
VAPGGKAVNAGAAKTSKGTPPPVPRVVPVDAGKKAPLKSLDALQRLFPR
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
gtgccgccgaatcctccaacgtcttttccgttccgcctcgattttccgcccgagctgccc
atcagcgcgcgggcggaggaaattgtggccacgttgcaggaacagcaggtgttgattctc
gcgggggaaacgggttcgggcaaaaccacgcagattccgaaactgtgtctcgccgcgggc
cgcggcacgcaggggcggatcgcctgcacgcagccgcggcgggtggcggcgctctcggtg
tcgaagcgggtggcggaggagcttaacgtggcgtggggccgcgaggtgggctgcaagatc
cgctttgccgaccagacgtcgcgcgagacggtgatcaagtttctcaccgacggcatgctg
ctcgcggaagtgcagggcgatccgttgctgcgcgcctacgacacgatcatcatcgacgag
gcgcacgagcgttcgctcaacatcgattttctgctggggcatttgcgcacgctgcgtttc
aagcggccggagctgaagatcatcatcacgtcggcgacgatcgacacgcagatgttcagc
gaggcgtttgacggggcgccggtgatcgaggtgtcggggcggacgtatcccgtggaggtg
atttacgcgccgctcgacgcgttgggcggggatttttcggaggagcagccgggagcggag
gatgcgggcgcgcgcgcggcccaccgggcggaggcgttgcattacatcgacggcgcggtg
gaggcggtgcggcggatcgtcgacgacagcacggcgggcgatgtgttggtgttcatgccg
agcgagcgcgatattcgcgaaacctgcgaggcgctcgacggagcgctgggacgcgggtgc
gagctcgtgccgcttttcgggcgactgacgaacgcggagcaacagcgagtgttcgcaccg
gtgccgaagcgaaagatcatcgtcgcgacgaacatcgcggagacctcgctgacgattccg
ggcatccggttcgtggtggacacggggctggcgcgcctgagccggtattccccgcaggcg
cgcacgcggcggctgccgatcgagcccgtggcgcaatcgagcgcggatcaacgcaagggc
cgcgcgggccgcgtggcagaaggcgtgtgcgtgcggctctactcggaggcggattttttg
gaacgcccgcgctttacgcagccggaaattcagcgcgcgaatctggcggacgtgattctg
cggctgaaggcgtttggcctcggcgacatcgagcggtttccgttcatcaatccgccggcg
acgaaggcgatccgctccggttacgcgttactcgaggagctgggcgcgctggcggaggag
ggcgcagccgcggcggacggcggagacgcacgggcgcgcgacgcgaggaaggcgggcgcg
gaggatccgccgcacggaaggcttctgacgggtgaaggcacccgccctacatctagctcg
gcgagtggaaatggcggagggagcggcacgcgggaactgacggcgatcgggcgggagctg
gcgcggttgccggtggatccgacggtcggtcgcatgattttgcaggcgcgcacggagaag
tgtctgcgcgaagtgctggtgatcgcggcgggcctttcgattcaggatccgcgggaacgt
ccgctggagaagcaggcggcggccgacgcggcgcaccggcggttccggcacggcgattcg
gattttctcacgttgctcaacatctgggaggcgtatcacggcgagttcgagacgatggcg
cagagcaaactgcggcggttttgccgggagcattttctcagttacacgcggatgcgcgag
tggcgggacgtgcatgcgcaattggcggatgtgctgcgcgagcgtgcgaatttgcggatg
agttcggtggccgatggcatgccggtggcgcccgcgggcgagggcggcaaggagacgaaa
gccacacggcttccgctgagaggtgcagaccgcgagcggggaaaggatccgctggcgtgg
gggacgccggcgtatcgcgcgatccaccgcagcgtgctcgcggggttgctcggcaacatc
gcgtattacgacgaggacaaccggatctacaaggcgacgcacgaccggcgggtgacgttg
tttcccggctcggtgctggcgaaccgtggcgacacgaagaaggcgcccgggggcggcgag
gcgaaggcgaagcgggcggcgaaaccgccggcgtggatcatggcggcggaggtcgtggag
acatcgcggttgtttgcgcgcacgtgtgcgcggctcgacccggcgtgggtgctggagctg
gcgtcgcacctgatcaagcagtcgcacagcgaaccgttttggaacgaggagaaggggcgc
gtgatggtgaaacagcgttcgcggctctacgggctcgagcttgatgtgcgcgcggtgagt
ttcgggcggatcgacccggtgcgggcgacggagattttcattcgcgaaggtttggtgaac
gacacgatcacgtggccgctggatttcatcgcgcacaaccgggcgttgcgcgagcaagtc
gagacgagtctcacgcgcacacgcgacagcagttttttgaatctcgacgaggcgttttat
cggttttacgcggagcgattgcggggggacgcggtggagcgggagcagtggggtgagggc
accccgcctacagttcgggcggcgcaacaaggggtcagcagcgtggctgagctggtggat
ttggtgcggcggcggcaggcgacggagccgcggtttttgatgatggagctcgccgatctg
cgcgatccggagacgttgcaacacgatgcggcggagtttccggcggtgctgccgttgacg
aatcaagtgctgccgctggcctacacctacaagccggggcagcccgacgatggcgtgacg
ctcgacgtccatgcgcgcgatgcggcggcactcacgcccgcggccctcgactgggcggtg
ccgggacatctggcggcgaaggtggagcattacttgggcgtgctgccgaaggacgtgcgt
cgcgtgttgattccgtttgcggatacggtgcgcagcgtgtcggagcaggtggcgcaacgc
gatcggttgacagatcggcgggagacgttgcccgaggcactcgcggctgtgctggcggag
cgttttaacgtgcgcgtggcgccggatttttggagcgacaaaccgccgcccgagcatttg
cgcgtgcggttgcgggtgcatgacgacacggggcgcgaactggcgagcagccgcgaactg
gcggaggtgcgcgcggctttgaaacagcccgcacccgcggcgggcgcgaacgcggcccag
caggagccggaggtgtggcggcgcgcgcgggcgcgctgggagaagccggcgcaggcgacg
tgggcctttggcgcggtgccggaccgcgtgcagatcggcgaccaggcgggcgtggcgatt
tatgcgtttccgggtttgcgcgcggaggcggacggcgtggcgctgcggctgtttcgcgcg
gcggaagaggcggagcgggagacgcgccgtggcgtgtcgcgattgctggaggacgcgttg
agtcgcgacctcggctggctggaacgagatttgcggcggttgcgggagttgggtgcgctg
gtggcgtcgatcgcgccggcggaggcgttgcaggcggatgcgtttctggcgctgcggcgg
tggttgatcgagcggacgccgccgcggctgacggaggaagggtttgcggcgacgttgcgg
caggcgagggcggatttgcaggggggggttccgcgcctggtggcgttgctgcgggagatc
ctgacattgcggcaggcgctgctggtgcatccgcagccttacgcgggactcgcggcggaa
ctggagcaactggtgccggcggactttctgcggcacacggagtttccgcggctggaaaat
ttcccgcgctatttgaaaggcatgacgctgcgcgcggagcgctggcggaaaaatccggcg
aaggatgcggagcgggcgaaggagctggcgccgctcgtggcagcggtggcgaagcggagt
cgtgaagatccggtgcggtggctcgtggaggagttgcgcgtgagtttgtttgcgcaggaa
ctgggcacggcggagccggtgtcggtggtgaaagtgcagcgggcgttgcaggagagcgga
gtggcgccgggtgggaaagccgtgaatgcaggcgcggcgaagacgagcaagggaacgccg
ccgccggtgccgcgcgtcgtgccagttgatgcggggaagaaggcgccgttgaagagtctc
gacgcgctgcaacgattgtttccgcgctga
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