KEGG   Osmia lignaria (orchard mason bee): 117600208
Entry
117600208         CDS       T09775                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
olg  Osmia lignaria (orchard mason bee)
Pathway
olg03030  DNA replication
olg03410  Base excision repair
olg03420  Nucleotide excision repair
olg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:olg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    117600208
   03410 Base excision repair
    117600208
   03420 Nucleotide excision repair
    117600208
   03430 Mismatch repair
    117600208
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:olg03032]
    117600208
   03036 Chromosome and associated proteins [BR:olg03036]
    117600208
   03400 DNA repair and recombination proteins [BR:olg03400]
    117600208
DNA replication proteins [BR:olg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    117600208
  DNA Replication Termination Factors
   ELG1-RFC complex
    117600208
Chromosome and associated proteins [BR:olg03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    117600208
DNA repair and recombination proteins [BR:olg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     117600208
  Check point factors
   HRAD17(Rad24)-RFC complex
    117600208
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_22 AAA_14 Rad17 AAA_16 AAA_24 Viral_helicase1 Mg_chelatase AAA_11 AAA_assoc_2 AAA_18 RuvB_N AAA_19 nSTAND3 DNAX_ATPase_lid DEAD AAA_28 ABC_tran MeaB AAA_5 NTPase_1 AAA_23 IstB_IS21 AAA_2 RNA_helicase AAA_3 SRP54 MipZ AAA_25 AAA_30
Other DBs
NCBI-GeneID: 117600208
NCBI-ProteinID: XP_034171184
LinkDB
Position
Unknown
AA seq 351 aa
MGGTDVVEEPMDVESLPSTSGYNEKKNQRVAKFANLPWIEKYRPQTFSDIVGNGDTVSRL
AVFAKNGNCPNIIIAGPPGVGKTTTILCLARILLGPAFKEAVLELNASNDRGIDVVRNKI
KMFAQKRVNLEKGKHKIIILDEADSMTDGAQQALRRTMEIYSNTTRFALACNNSEKIIEP
IQSRCAMLRYGKLTDAQILAKILEVCEKENVSYTDDGLEAIVFTAQGDMRQALNNLQSTN
NGFGHVNSENVFKVCDEPHPLLVKEMLEHCTQGDISKAYMVMQHLWRMGYAAEDLISNIF
RVCKNIPIDETLKLDFVKEIGITHLGIVDGINSLLQLNSLLARLCKRAKQS
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgggtggcacggacgttgtcgaagaacctatggatgttgaatctttaccatcaacaagc
ggttacaatgaaaaaaagaatcaaagagttgctaaatttgcaaacctaccctggattgaa
aagtaccggccccaaacattctctgatattgttggaaatggagacacggtgtcaaggctt
gctgtctttgccaagaatggcaactgtcctaatattatcattgctggtccaccaggagtt
ggaaaaacaacaacaatcctctgtctagcacgtatccttttaggaccagcctttaaagaa
gcagtattagaattaaatgcctcaaatgacagaggaatagatgttgtcagaaataagatc
aaaatgtttgcacagaaaagggtaaatctagaaaaaggcaaacataaaataatcattctg
gatgaggctgatagtatgactgatggagctcagcaagctctacgtagaacaatggaaatt
tatagtaatactacaagatttgcattagcttgtaataacagtgagaagattattgaacca
atacagtcacgttgtgctatgttgagatatgggaagcttacagatgcacaaattttggca
aagatacttgaagtttgtgagaaagaaaatgtttcatacacggacgatggtttagaagca
atagtatttactgcacaaggtgacatgagacaagcactgaacaatctacagtcgacgaat
aatggttttggtcatgtaaatagcgaaaatgtttttaaggtttgcgacgaacctcacccg
ttactcgtcaaagaaatgcttgaacattgtacacagggtgatatttcgaaagcatacatg
gtaatgcagcatttatggagaatgggatatgccgcggaagatttaattagcaacatattc
cgagtgtgtaaaaatataccaatagatgaaactttaaaactggattttgtaaaggaaatt
ggaataacacatttaggaatagtggacggaattaatagtttactgcaattgaacagtctt
ctggctcggctttgtaaaagagcaaaacaatcttaa

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