Osmia lignaria (orchard mason bee): 117600799
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Entry
117600799 CDS
T09775
Name
(RefSeq) exosome complex component RRP42 isoform X1
KO
K12589
exosome complex component RRP42
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117600799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olg03019
]
117600799
Messenger RNA biogenesis [BR:
olg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117600799
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
117600799
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
117600799
NCBI-ProteinID:
XP_034172587
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MAEIILSRGEKTFILHGIDADFRNDGRQRCEYRSIEIETKLMPQTHGSSRLRIGNTDILV
GVKVELDTPHADKPNEGKLEFFVDCSATATPAFEGKGGDDLATEISNILTIAYQTRNAFD
LRTLCILPNKKCWKIFVDVLILQCGGNLFDAVGTAVKAALYSTEIPKITAATLDGGEPDI
QLSDDFYDCIQLDTTNYPIIVTLCKVGDNYIVDPTSEEEVCSASSIVMSVLPNGKISSVI
KLGYGSIQSTTFKKILKMAQNVGLRLNGDLMKALKEENKLGRQKQIFGFLN
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaattattttaagccgcggagaaaagacatttattcttcatgggatagatgca
gattttagaaatgatggtagacaaagatgtgaatatcgatcaatagaaattgaaaccaaa
ttaatgcctcaaactcatggatcttcaagattacgcataggaaatacagatatacttgtg
ggtgttaaagttgagctcgatacacctcatgctgataaaccaaatgaaggaaaattggag
ttttttgttgattgctctgctactgccacccctgcatttgaaggaaaaggaggtgatgat
ttagcaactgaaataagtaatattttaacaattgcttatcaaacacgcaatgcttttgat
ttaagaacattatgtattttaccaaataaaaaatgttggaaaatatttgttgatgttttg
attctacaatgtggtggtaacctttttgatgcagttggtactgcagttaaggctgcatta
tatagtacagagataccaaaaatcacagctgcaactcttgatggtggagaaccagatatc
cagttgtccgatgatttttatgattgtattcaattagatacaactaattatccaatcatt
gtgacattgtgcaaagtcggtgataattatattgtggatccaacttcagaagaagaagta
tgcagcgcaagcagtatagttatgtctgtattaccaaatggtaaaatatcatctgtaatt
aaattgggttatggaagtattcagtctactaccttcaagaagatattaaaaatggcccaa
aatgtgggactgcgattaaatggagatcttatgaaagctttaaaagaagaaaataaactt
ggacgacaaaagcaaatatttggattccttaactaa
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