Osmia lignaria (orchard mason bee): 117600978
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Entry
117600978 CDS
T09775
Name
(RefSeq) LOW QUALITY PROTEIN: protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117600978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olg03019
]
117600978
Messenger RNA biogenesis [BR:
olg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117600978
mRNA degradation factors
5'-3' decay
Decapping complex
117600978
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
117600978
NCBI-ProteinID:
XP_034173015
LinkDB
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Position
Unknown
AA seq
715 aa
AA seq
DB search
MENSSLEDGLDCPLEEDDIGEEEEYDALNDETFGSEATIGDWEKDHEKLAKITESSRPQH
QSAGGKKNGVHTDIEDNLSHLVLDEKEGIVPRPGVWDSPNLSVPKPRPPLTLPSALTNVC
TVEELEKGLIANRPPPGLNKLPQTQQQKPDGSLLFNSLSGPPRFPPGLGIPPPHPVVLPP
NMRFPHPPFVQHPRLLPNQPGNVLRYPVAPHLMLPHPAQRQPIHGSFCNSFPQPPHSNLG
HPPFLRPDHGMMPPFPTNQTNHQQQQQQQHSFPHPGNQRNQNWPFHHVEQQGNHQTFFKN
NQHHRNYDRNNQRQYHYHHQYQGVNGVSSSGEYDEYADLMTNREKQWLINIQLLQLNTNE
PYVDDYYYTVFCDKRNKQSTNQDQKDKKHNNNNNNGYHRDNRDRDQQSHHVLPRPVVYTP
MQFENSLGKLQFASVIAPRKVIDMDVVPNSDPQQTTQMQQKDTKRTRQLLLEIERLYVIQ
LKLEDLHNPLALLSEQQNQEGENETNVVKKTSPELINAMLMALLQLIRDDKLASMLSIRK
GKTLLLRFLPFVNVTDHRNQLEELWKAIFRGLAVIGRRDSHLLISLHSEFQRWFNDVQDF
GTILRLARSLSDSVSQPIKINSLAFALTNEFGVSVIASMLEQAENLYPTDDSLSSEWSSF
IANIIKTIGETPPCVAPCXKHLNRLSHLKSGRYTTLELLLTNANPSEKSMIDIIL
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggagaatagcagtttagaagatggtctggattgtccattggaagaagatgatattgga
gaagaggaggaatacgatgcgctaaacgatgaaacttttgggtctgaagccacgattggc
gattgggagaaagatcatgaaaaacttgcaaagattacagaatccagtcgtccgcagcac
caaagtgctggagggaaaaaaaatggagtccataccgatatagaagataatttatctcat
ttggtgttagatgaaaaagagggtatcgtccccagacctggggtatgggatagtcctaat
ttatctgttcctaaacctcgcccacctttaaccttaccgtcggctttaacgaacgtgtgc
accgtcgaagaattggagaaaggtctaatcgcgaatagacctcccccaggattaaataag
ctccctcagacgcagcaacagaagcccgatggatcgcttttgttcaattccctatccggt
ccaccgcgtttcccaccggggttgggtataccacccccgcatcccgttgttttaccacca
aacatgaggtttccgcaccctccgttcgtgcagcatcctagactactgcccaatcaaccc
ggaaatgtactgagatatcctgtagcaccacatttaatgctgccgcatcctgcgcaaaga
cagccaattcatggttctttttgtaacagtttcccacaacctccacattcaaatttaggt
catcctccatttttacggcccgatcatggcatgatgcctccttttcctaccaaccaaact
aatcatcaacaacaacaacaacaacaacattcttttccgcatcctggaaatcaaagaaat
caaaattggccctttcatcatgtggaacagcaaggaaatcatcaaaccttttttaaaaac
aaccaacaccatcgtaattacgaccgaaataatcagcgacaatatcattatcatcatcag
tatcaaggagtaaatggagtaagcagttctggcgaatacgatgaatatgctgatcttatg
actaatcgagagaagcagtggttaattaacattcaactgctacaattgaacacaaacgag
ccatatgttgatgattattactataccgtattctgcgataaaagaaataaacagagcaca
aatcaggatcagaaggataaaaaacacaacaataacaacaacaatggctaccatagagat
aatagagatcgggatcagcaatctcatcatgtacttccgaggccagtagtatacacgcca
atgcagtttgaaaactcgttaggtaaactacagttcgccagcgtaattgcaccgcgtaaa
gtaatcgacatggatgtagtaccaaacagtgatcctcagcaaacaacgcaaatgcaacag
aaagatacaaaaagaacgagacagttgttgcttgaaattgaaaggttatacgtgatacaa
ttgaagcttgaagatttacacaatcctttagctctgctgagtgaacaacaaaatcaagaa
ggagaaaatgaaacaaacgttgttaaaaagactagcccggaattaataaatgcaatgttg
atggctctccttcagttaatacgagacgataaattagcaagtatgctaagtattcggaaa
ggaaagacgctgttgttgaggttcttgccattcgtgaacgtaacggaccatcgtaatcaa
ttagaagagctgtggaaggctatatttcgaggattagccgtaataggtcgtagagattct
catctgttaatatccctacattcggaatttcaacgttggttcaacgacgtacaagatttc
gggacgatacttcgtctagctcgctcgctatcagactctgttagtcagcctatcaagatc
aatagtttggcttttgctcttacgaacgagtttggtgtatccgtaattgcctcgatgctt
gaacaagcagaaaacttataccctacggatgattccttatcttcggaatggtcctccttc
atagcaaacatcatcaaaacaattggtgaaactccgccatgcgttgcaccttgtnncaag
cacttaaatcgattatctcatttaaaaagcggaaggtacacgactttggaacttctacta
accaatgctaatccttccgaaaagtcgatgatcgacatcattttataa
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