Osmia lignaria (orchard mason bee): 117601032
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Entry
117601032 CDS
T09775
Name
(RefSeq) nucleoporin NUP188 homolog
KO
K14311
nuclear pore complex protein Nup188
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117601032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olg03019
]
117601032
Messenger RNA biogenesis [BR:
olg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117601032
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N
UBN_AB
Motif
Other DBs
NCBI-GeneID:
117601032
NCBI-ProteinID:
XP_034173146
LinkDB
All DBs
Position
Unknown
AA seq
1900 aa
AA seq
DB search
MESTVESLPYCKELWFLISDTVCRCERQLVEDEIKKETKLLKEGLLFFKPYTEASLQNIP
KNDPSPKMYELISKLAPLLNLDATITWDLVCNFIKYEYRNCAETFASQLIDFTSMKALID
DIWDFYYSERMTLIKCLKLMVEYKDKGHRYQKEFSNFFNDILFGTLLESVRKQIEMLKTV
NPPTRSQLCTEEYLHRLYNSSLIEMRELLHILTVIIHDIHIAQSEFMQLYESIGGEPRRL
ASTKSHEDKKAIARKIKEIQFSQAGLLLVALDIRKHPDMEEWVPSVRSSMQEIFEQKCIR
DNFPQDSPLFLSWMMANYAIDSENVDTLNRFKPFAIKAIQLNVFHYLQDLLNCEMICEKT
HYAEVVRSSVYNLLTLVCAFVDEDKLSVLNGIFDAVAATIQFPETAARFWEEQDNGLFMI
YKFAAEQFPYDFDPLTNIAIGLASASQSSAEKIAIELDNLQSLTLEVPRQRDHNKPYRPY
EQECTIHRNSYTISEDCFHENVRILSSDREVVIFRQRASYWDALHYKIEQLFSQVGGRTT
HTYEMSKNLPENVCLGLKLLKTLAKYVGIRQSMVIPTELSFEIINRFSYPVLPEEKMYIY
KIVAACIGISSELVLEYPEEILSRMRAGVYPRLNNRYQKALNFAEAVSFDGGIIASWLSA
VETIAHSYPILNAYLDILSKYLIRKYNEEALYAIEIPGMVFLLQGVLPKLDSWYFESDAE
KTDLWLKSMFCVHRALESSLPKEDIRNELQLVVAYSLLYLEPRHALLKLIRTGERTLHNK
MMAETDWIRGKGFKAIKSVQLALSVVNRLLIFRKSLGLVIGDRSPLEAALYSSPRVPNGL
LIVPTIVNYLYVWFSPPLQAMAVRLLKKFAEGSSMSLLVCMGMDGTAIRETFASRRGLMS
PTCDAEVKVAILELVAVCLEKQPGLTEALFNIVHPAECKRIFPRSVEEFFTEGCRQFLVK
YLQRIYEKENIVCDKLYNSTMALLRAMWYHRNEILVNFFRKRENFWTHLFAPLFRDLVPG
AKGYSHLLDIITLELFKSTTLEEDFSNNLKKLLDKSKDYWKKLAIYILDDAHTDTEELNS
YEKQDTTHVDSLYETNLESWYNFIVTLTDERIASSYPINVTQAQLITQRSLESLLERIKQ
SQDVSSRKVTMLLASLSLRCITSWKQMCVDDSRIFKTGLTQLMQEIGQAYRSYGKSLRQT
LISLLLGCVQCVKSTLREDATSLEYLLAHACTIAASELEELKEAATLLEKRIHEKVERRT
DDKGTVSSVKVQKNVDERNAETIRGIRESLPATLAVCMVTQLLRSYVERNALSKYQRKSS
CVQLRQMIPELMACIGITLQKYPYLRFSSAALDLLNLIVRSPYTLHPINENDIAKLWLSL
IPPGELENSMLDSLYDDCPNGKWRCQDWWPLYTLGLEFLIGLVTRDMPSVYIKSIVMFLN
SHEQQLMVASTLLRHTADLLAADLVQSLVALIHIMATQPYVWNSIQTNVCETLIKCMYLA
YDNTVNLLLRPRILKFIIDGISVESAEELESCDKRSPSGELKLLVNKLIVINTTCALSFV
HFSPRLNTLVDTIYTQDFWYTPMAEMYFGPPQMSMSSGPRLTYGTIISSTQLFTQALHSR
SQSVSSSSVSFMGHPDKTDSAKKEWEHATPEDRRMHTSKDLRRIIHAASGSNSRSSASVG
GEFLVYVSGLDVTVPLLSSPRLVRRPYDPLICENTILSRATALASGRHVAKGGSGMVTGS
SDSPIMTKYQKFSDPWFESMDENNTRLALEINLVLILCQALEGVRSPRIALRDRQLIARE
TVTELGVFFDFLEHRGTPDDWQVKGSLINADSRNVRTIQCVDSNQAILPARLIETARKDL
EENILTTGMFTTNISSIQFLPLMGKLLKAVMESLDLTQFR
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atggaatccactgtagaaagtttgccttactgtaaggagttatggtttttaatatccgac
accgtatgccggtgtgagagacaactggttgaagatgaaattaaaaaagaaacgaaactt
ctcaaggaaggcttactgttttttaagccatacacggaagcatcgcttcaaaatataccg
aaaaatgatccttcacctaaaatgtacgaattaattagtaaacttgctcctctccttaat
ttggatgctacaattacatgggatctagtctgtaattttataaaatacgaatatcgaaac
tgcgcggagactttcgcgtctcaacttatagatttcacctcgatgaaagcgttgatcgac
gatatttgggatttttattattctgaaaggatgaccttaataaagtgccttaagttgatg
gttgaatataaagataaagggcatcgttatcagaaggaattttcaaactttttcaatgac
attttatttggaacactcttagagtctgtcagaaaacaaatagaaatgttaaagactgtg
aatccgcctacaaggtcccaattgtgcacagaagagtatttgcataggttgtacaatagt
agtctgatcgaaatgagagaattactccatatattaactgtcatcattcatgatatacat
attgctcagtcagaattcatgcagttgtacgaaagcataggaggagaaccacgacgatta
gcgagtacaaagagtcacgaagataaaaaagcgattgctagaaaaatcaaagaaatacag
ttcagtcaggcaggtttgcttctggtagcattagacatcagaaaacaccccgacatggaa
gaatgggtaccgagcgtaaggagtagtatgcaagagatctttgaacaaaaatgtattcga
gataatttccctcaagatagtccactgtttctatcgtggatgatggcaaattacgcgatc
gattctgaaaacgtagataccttgaatcgatttaagccgtttgccatcaaagccatacag
cttaacgttttccactacctgcaagacttgttgaattgcgaaatgatctgtgagaaaact
cattacgccgaggttgtacgtagcagcgtgtacaatcttctcacgttggtatgcgctttc
gtagacgaagacaagttaagcgtattgaacggtatcttcgatgccgttgctgctacaatt
cagtttcctgaaactgccgcgcgattttgggaagagcaggacaacggtttatttatgatt
tacaagttcgctgctgaacagtttccatacgatttcgacccattaacgaacattgcgatt
gggttagcaagcgcctcgcaatcgagtgccgaaaaaattgcaatagagttagataatctg
caatcattaacgttggaggtaccgcggcaacgggatcacaataagccgtacagaccatac
gaacaggaatgtacgattcacagaaattcctacacaatatccgaagattgtttccacgaa
aatgtacgcatattatccagcgatcgggaagtggtgatatttcgtcaaagagcgagctat
tgggatgctttgcattataagatagagcagctgttttctcaagtaggcggaagaacgaca
catacgtatgaaatgagtaaaaatttgccagagaacgtttgcttaggtctgaaattatta
aagacgctagccaaatacgttggaatacggcagagcatggtgataccaactgaattaagt
ttcgaaatcatcaacagattttcctatccagtattacccgaagaaaagatgtacatatat
aaaatagtagcagcatgcattggcatctcgtccgaactcgtactggagtatcctgaagaa
atcttgtcacgtatgcgtgctggtgtttacccaagattgaataatcgatatcaaaaagcc
ttgaactttgcggaagcggtctctttcgacggtggtataatcgcttcttggttgtccgct
gtggaaacgatcgcccattcttatccaattttgaacgcgtacttggacatcttatcgaaa
tatttaatcaggaaatacaacgaggaagctctgtacgcgattgaaatacctggaatggta
tttttgttgcagggtgttttgccaaaattggatagctggtatttcgaatcggacgcagag
aaaaccgacttatggttgaaaagcatgttctgtgttcacagagcgctcgaatctagtcta
ccgaaggaagacattagaaacgaattacaacttgtggtagcgtatagtctactgtatctg
gaaccaaggcacgcgctgctcaaattgattcgtaccggtgaacgtactttgcacaacaag
atgatggcagagacagattggattcgcgggaaaggattcaaagcgatcaaaagcgtacaa
ttggccttgtccgtggtaaacagattgctgatattccggaagtcattgggcctggtaata
ggagatagatcaccgttggaagctgccttgtactcttcgcctcgggtaccaaacggtctt
ttgatagtacctacgatcgttaattatctctacgtttggttcagtccacctttacaagcg
atggctgtgagattgttgaaaaaatttgccgaaggatcatcgatgtccctactcgtttgc
atgggcatggatggtacagctatacgagagacgttcgcttctcgcagaggtctcatgtcg
ccgacttgcgacgctgaggtgaaggtagctattctcgagctggttgctgtatgtttagaa
aaacaacctggactaacagaagctctcttcaacatcgtgcatccggcagaatgcaaacga
atctttcctcgatcggtagaagaattttttacagaagggtgcaggcagtttctggttaag
tatctgcagcgaatttatgagaaggaaaatatcgtctgcgacaagttgtacaatagtaca
atggcgttgttacgagcgatgtggtatcacagaaacgagattctcgtgaatttctttcga
aaacgagaaaacttttggactcaccttttcgcgcctcttttcagagacttggtaccaggc
gcgaaaggctattcccatctgctggacataatcactttagagctgttcaagagtaccacg
ttggaagaggatttctcaaataatctgaagaaactattggacaaatcaaaagattactgg
aaaaaattggcgatttacatactcgacgatgcgcacacagacacggaagaattaaacagt
tacgagaaacaagacacgactcacgtagattcgctgtacgaaactaatttggaatcctgg
tacaatttcatcgtcacgctaacggatgagagaatagcttcgagttacccgatcaacgtg
acccaagcacagttaataacccaacgttccttagaatcgttgttagaacgaatcaaacag
tctcaagacgtctccagtcgaaaagtcacaatgttgttagcttcgttgtctctacggtgc
atcacctcctggaaacaaatgtgcgtggacgactcgagaatctttaaaacgggtctaacg
cagctgatgcaggaaatcgggcaagcttatcgcagttacggtaaatcattgcgtcagaca
ctgatctctttgctcctcggttgcgtgcagtgcgtgaaaagcaccctgcgcgaagacgcg
accagcctcgagtatcttttggcacacgcctgtacgatcgctgccagcgaactggaggaa
ctgaaagaggccgcaaccttgttagagaaacgaatacacgaaaaggtggagcgaaggacg
gacgataaaggaacagtgagcagcgtgaaggtacagaagaacgtcgacgaaagaaacgcg
gaaactattcgcggcattcgggaaagtttaccagctaccctggctgtttgcatggtcacg
caactgttgcgctcctacgtcgaacgaaacgcgctttccaagtatcaacgaaagtccagc
tgcgtgcaacttcgacaaatgataccggaactgatggcctgcatcggtatcactttgcag
aaatatccgtacttgaggttcagcagcgcggcgctcgacctgcttaacttaatcgtacgt
tctccctatactttgcatccaatcaacgaaaacgacattgctaaattgtggttgagttta
attccacccggcgagcttgagaacagcatgttagactctttatacgacgattgtccgaac
ggcaaatggcgatgccaagattggtggccactttacacgctcggcctcgagttcctaata
ggactggtcaccagagacatgccatcggtttacatcaaatcgatcgtgatgttcctgaac
tctcacgagcaacagctgatggtggcgtcgaccctgttgaggcataccgcggacctctta
gcagccgacctagttcagtctctcgtcgctctcatccacataatggcgacccaaccgtac
gtttggaactcgatacagacaaacgtttgcgaaactctgatcaaatgcatgtacctggcg
tacgacaacaccgtgaacctgttgctgagaccgcggatcctcaagttcatcatcgacggg
atcagcgtggagagcgcggaagagttggagtcttgcgataaacgatccccgagcggggaa
ttgaagttactggtcaacaaattgatcgtgataaacaccacctgcgccctgagtttcgtc
cacttctctcctcgattgaacaccctcgtggacactatatatactcaagacttttggtac
actcctatggcggagatgtactttggaccacctcagatgagcatgagttccggcccgcgg
ttaacctatggcactataatcagttcaacgcagctgttcacgcaagctcttcattctaga
tcgcagtctgtaagctcgtcttcagtttcttttatggggcatccggataaaacggattcc
gctaagaaagagtgggaacacgcgaccccggaggatcgacgaatgcatacgagcaaagat
ttaagaaggatcatccacgcggcttccggctccaactccagatcgtccgccagcgttgga
ggagaatttttagtgtacgttagcgggctggacgtaacagtgccgttgctaagcagtcca
agactggtacgcagaccttacgatcctcttatctgcgaaaatactattctatcgcgtgca
acagccttggccagtggtagacacgtggcaaaaggaggcagcggaatggtcacagggagc
agcgacagccctatcatgaccaagtatcaaaaattcagcgatccttggttcgaatctatg
gacgagaataatactagactggctctcgaaattaatctcgtgttgatattgtgtcaggct
ctagaaggtgtcaggagtccaagaatcgctctcagagatcggcaattgatcgcgcgcgaa
acggtcacggaattaggagttttcttcgattttctcgaacatcgaggcacccccgatgac
tggcaagttaaagggtcactgatcaacgcggactctagaaacgtgagaactattcagtgc
gttgactcgaaccaagctattttacccgcgagattgatagaaacagcgaggaaagatttg
gaagagaatattcttaccaccgggatgtttactactaacattagtagcatacaatttttg
cctttgatggggaaattacttaaagctgtaatggaatccttggatttaacacagtttcgg
taa
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integrated database retrieval system
