KEGG   Osmia lignaria (orchard mason bee): 117601167
Entry
117601167         CDS       T09775                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
olg  Osmia lignaria (orchard mason bee)
Pathway
olg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:olg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117601167
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:olg03041]
    117601167
Spliceosome [BR:olg03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    117601167
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st PRP4 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_EIPR1 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_SCAP Ge1_WD40 Beta-prop_HPS5 Beta-prop_Nup120_160 WD_LRWD1 WD40_like Tlp
Other DBs
NCBI-GeneID: 117601167
NCBI-ProteinID: XP_034173490
LinkDB
Position
Unknown
AA seq 525 aa
MSDDEDLVYVKKQKTVHYGSLEEVERARLAAAAESSEEEKDSTNLGESINAAVTLANVHI
SNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKNLRQLGEPICLFGEGPAD
RRTRLRELLANLGEDAIKKKHEEDEKPLHPIERDTETTWYHEGPESLQIARSWIAAYSLP
RAKGRLDKARQDLELPAATRTARRQELLKKLQALTIYCSQIGDTRPISYCQFSSNSKLLA
TASWSGLCKIWSVPDCTLLRTLKGHTCNVGCIVFHPKATVTEDVVGEKAGQTCVLASCAA
DGSVKLWSGGSGEEPLAEVEGHEPHRVSRLAFHPSGRFLGTCCHDASWRLWDLEQQAEVL
HQEGHARAVHCISFQCDGSVSATGGHDSFGRVWDLRTGRCIMFMEGHLKSIFGIDFSPNG
FHIATASEDNTCKIWDLRKRSCVYTIPSHTNLLSDVKYQRIEGQYLVTASYDNTAKIWSN
KTWQPLKTLPGHDGKVMSVDISPDHKFIATTSYDRTFKLWAPECM
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgtcagacgacgaggatttggtttatgtaaagaaacagaaaactgttcattatggatcg
ctcgaggaagtcgaacgcgcaaggttggccgcggcagccgaatcttccgaggaagaaaaa
gattctacgaatttgggcgagagcatcaatgctgccgttactttggcaaatgtgcatata
tctaatgaatatatggaacttgaagatgaaatgtccaaagatagacaagccctcttagag
gagttcgagcgtcgaaaaaaagcgcgccaaattaatgtttccactgatgactcggaagta
aagaaaaatttaagacaattaggcgaacctatttgcttatttggcgaggggcctgctgat
agaagaacaagattaagagagttactggccaacctaggtgaagatgcaattaaaaagaag
cacgaagaagatgagaaacctttgcatccaattgaaagagatactgagacaacttggtat
cacgagggaccagaatctcttcagatagcacgttcatggattgctgcatattcattgcct
agagcaaagggtagattggacaaagcaaggcaagacttagaattaccagcggctacccgt
acagcacgccgtcaagagcttctgaagaaattacaagcactcacgatttactgttctcaa
attggcgataccaggccaatttcgtattgtcagtttagttcaaattccaaattgttggca
acagcttcgtggtcaggtttatgtaaaatatggtctgtacctgactgtactctgttaaga
acccttaaagggcatacttgtaatgttggctgcattgtttttcatccaaaagctactgtt
actgaggatgtggtaggggagaaagcaggacagacttgtgtattggcatcctgtgctgct
gatggatcagtgaaattgtggagcggtgggtcaggcgaagaacctctagccgaagtcgaa
ggacacgagccgcacagagtttcgagattagcattccatccttctggtagatttcttgga
acatgctgtcacgatgcttcgtggagactttgggatttagagcaacaggcagaggtttta
caccaagagggtcatgctagagctgtgcattgtattagtttccagtgtgacggcagcgta
agcgccactggtggacacgattccttcggtagggtgtgggatcttcgcacgggaagatgt
attatgtttatggagggtcatttgaagtctatttttggtatcgatttctctcctaatggg
tttcatatagcgaccgcgagcgaagataacacgtgtaaaatatgggatttacgaaagaga
tcctgcgtgtacacgataccatctcatacgaatctattatcagatgttaaatatcagagg
atagaaggacagtatttggttacagcctcgtacgacaacactgccaagatatggtcgaac
aagacctggcaacccctgaaaaccttaccaggccacgatggtaaagtgatgtctgttgat
atttctcctgaccacaaatttatcgcgactacttcttacgatagaacgttcaagctctgg
gcgccagaatgtatgtaa

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