KEGG   Osmia lignaria (orchard mason bee): 117601244
Entry
117601244         CDS       T09775                                 
Name
(RefSeq) protein CASC3 isoform X1
  KO
K14323  protein CASC3
Organism
olg  Osmia lignaria (orchard mason bee)
Pathway
olg03013  Nucleocytoplasmic transport
olg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:olg00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117601244
   03015 mRNA surveillance pathway
    117601244
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:olg03019]
    117601244
Messenger RNA biogenesis [BR:olg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     117601244
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 117601244
NCBI-ProteinID: XP_034173665
LinkDB
Position
Unknown
AA seq 823 aa
MSDTRRRRKSNQSCGSDDLSDSGEELNATKETQSSEQTDGHQDSECDVYPSDSDVESQDG
ALRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTTDEVTDNTVEPQNERET
KEKKVWKDKEDRWDHDRYNDEEQAPKSHEELIAVYGYDIRNEEGPPRARRRRRYGRGPNK
YTRNWEDEDAYGKAGTNVSNKNKKFNRSGEDFPALGTNKNASAPPVDEPVISSAWYSSKN
KSQNKVQNFPPLQAQSDSPKTKSSGTSNTLTNENKAPNEPTNPAWKKDAKNSSYTQSSNG
NSGAGGDADKLVNTKVSPRDNNKRNVQESVSLAASRTRGRGFRTNANNNMVANRTVETKP
KGRGAGPISAENKRNSTIQNDDEQQITHDMKHVNLHDGTQYHQGGRHNKNFYGQSSNQQR
SGTVPPRMQQQSHSQQQPQQQQQSQQQATQQQDSSANRPKRYSSLRQRPTASETPGQQNY
TPPHGQHGQHNQHNQHNQHSQHNQHNQHNQHGQHNQHGYFPPQAGNSRGVLESQGYPQGH
FEQSTPVAAAAAPMAGQPVIPLPPNGQPASYAPPPFLVPPPQFIPPQTAPPSIINYVPGP
NGPAFQPNFQGYQGYSPPVQPSRPPPPQELFQPQGCTYYSPAQQQQQQQQSAPMRRPKAA
IPILPPPENQQHQTSRGRGRSTQPQQNNQVGNIQQTELEIKTDLEESDQKIVSEQFDNIQ
TEQIIEVEEAPKNDDLSVITDTMVENKEKDVPDVDIDIPLGSEGVTTDQVDGISDHDSLK
VTIDDQNIIPLKSPEAVVEETENDSNIIETTTSESKVVEEAAA
NT seq 2472 nt   +upstreamnt  +downstreamnt
atgtcggatacaagacgacgtcgaaaatctaatcagtcttgcggttccgatgacctctcg
gattctggcgaagaattaaatgcaacgaaagaaacccagagcagtgaacaaactgatggt
catcaggattcagaatgtgatgtttatccatctgattctgatgttgaatctcaagatggt
gcattacgagaaagtggagatggacaagaagaagagaaacctcaaaagaaattggatgat
gatgaggacagacgtaatccgcaatatattcctaaaagaggaacattttatgaacatgat
gacaggactaccgatgaagtgacggataatactgtagagccacagaatgaaagagaaacc
aaagaaaagaaagtgtggaaagataaagaagatagatgggaccatgatcgatacaatgat
gaggaacaagcaccaaagagccatgaagaattaatagcagtttatggttatgatataaga
aacgaagaaggtccacctagagctagaagaagaagaagatatggtcgtggtccaaataag
tatacacgtaattgggaagatgaagatgcatatggaaaagctggaactaatgtttctaat
aaaaataaaaagtttaatagaagtggtgaagatttccctgctctaggaactaataaaaat
gcttctgcaccacctgtggatgaaccagtaatctcatcagcttggtacagtagtaaaaat
aaatcacaaaataaagtacaaaactttccacccctgcaagctcagagtgatagtccaaaa
acaaaatctagcggtacatctaatactctcacaaacgagaataaagctcctaatgaacct
acaaatcctgcttggaaaaaggacgccaaaaattcatcctatactcaaagtagtaatgga
aacagtggggctggtggtgatgcagataaattagttaacactaaagtatctcccagagat
aacaacaagaggaatgttcaagagtctgtaagcttggcagccagtagaactcgcgggcga
ggattcagaacaaatgctaataacaatatggtcgctaatagaacagttgagacaaagccg
aaaggacgtggagcaggtccaatctctgccgagaataagagaaatagtactattcaaaat
gatgacgaacagcaaattactcatgacatgaaacatgtgaatcttcacgatggtacgcaa
taccatcaaggtggaagacacaacaaaaatttctatggacagtcttccaatcagcaaaga
tcaggcacggtacctccaagaatgcaacagcagtctcattcacagcaacaaccgcaacaa
caacagcagtcgcagcaacaggcaactcaacaacaagatagttctgctaatagaccaaag
cgatattctagtttgcgacaacgtcctacggcttccgaaactccaggacaacaaaattat
acaccaccgcatgggcaacatggacagcataatcaacataatcagcataatcaacatagt
cagcataatcaacataatcaacataaccaacacggtcaacataatcaacatggatatttc
cctcctcaagctggaaattcaagaggtgttttagaatcacaaggatatccacaaggtcat
tttgaacaatctacgcccgttgctgccgctgctgcacccatggctggtcagcctgttatt
cctctgccgcctaatggtcaacctgctagctatgctccaccgccgtttttagtaccgcca
ccacagtttattcctccgcagactgctccgcctagtataattaattatgttccgggtccg
aatggaccagcatttcaaccaaattttcaaggttaccaaggatatagtccaccagtacag
ccatcgcgtccaccgccaccgcaagaactgttccaaccacaaggttgcacttactatagt
cctgcacagcagcaacagcaacaacaacagtcggcaccgatgagacgaccaaaggcagct
attccaattcttccaccaccagaaaatcagcaacatcaaactagtagaggaagaggtaga
agtacgcaaccacaacaaaataatcaagtgggaaatatacagcagactgaactggaaatc
aaaactgacttggaagaaagtgatcagaaaatcgtgtctgaacaatttgataacatccaa
accgagcaaattatagaagttgaagaagcaccgaaaaatgatgatttaagtgtaataacg
gatactatggttgaaaataaagaaaaggatgttccggatgttgatatcgatataccactg
ggctccgaaggtgttacaactgatcaagtagacggaataagtgatcacgattcattaaaa
gttactatagatgatcagaatattattccacttaaatctccggaagcagtcgtggaagag
actgaaaatgattcaaatataattgaaaccactacgtctgaaagtaaggttgttgaagag
gcagcagcttga

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