Osmia lignaria (orchard mason bee): 117601244
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Entry
117601244 CDS
T09775
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03013
Nucleocytoplasmic transport
olg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117601244
03015 mRNA surveillance pathway
117601244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olg03019
]
117601244
Messenger RNA biogenesis [BR:
olg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117601244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
117601244
NCBI-ProteinID:
XP_034173665
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MSDTRRRRKSNQSCGSDDLSDSGEELNATKETQSSEQTDGHQDSECDVYPSDSDVESQDG
ALRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTTDEVTDNTVEPQNERET
KEKKVWKDKEDRWDHDRYNDEEQAPKSHEELIAVYGYDIRNEEGPPRARRRRRYGRGPNK
YTRNWEDEDAYGKAGTNVSNKNKKFNRSGEDFPALGTNKNASAPPVDEPVISSAWYSSKN
KSQNKVQNFPPLQAQSDSPKTKSSGTSNTLTNENKAPNEPTNPAWKKDAKNSSYTQSSNG
NSGAGGDADKLVNTKVSPRDNNKRNVQESVSLAASRTRGRGFRTNANNNMVANRTVETKP
KGRGAGPISAENKRNSTIQNDDEQQITHDMKHVNLHDGTQYHQGGRHNKNFYGQSSNQQR
SGTVPPRMQQQSHSQQQPQQQQQSQQQATQQQDSSANRPKRYSSLRQRPTASETPGQQNY
TPPHGQHGQHNQHNQHNQHSQHNQHNQHNQHGQHNQHGYFPPQAGNSRGVLESQGYPQGH
FEQSTPVAAAAAPMAGQPVIPLPPNGQPASYAPPPFLVPPPQFIPPQTAPPSIINYVPGP
NGPAFQPNFQGYQGYSPPVQPSRPPPPQELFQPQGCTYYSPAQQQQQQQQSAPMRRPKAA
IPILPPPENQQHQTSRGRGRSTQPQQNNQVGNIQQTELEIKTDLEESDQKIVSEQFDNIQ
TEQIIEVEEAPKNDDLSVITDTMVENKEKDVPDVDIDIPLGSEGVTTDQVDGISDHDSLK
VTIDDQNIIPLKSPEAVVEETENDSNIIETTTSESKVVEEAAA
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatacaagacgacgtcgaaaatctaatcagtcttgcggttccgatgacctctcg
gattctggcgaagaattaaatgcaacgaaagaaacccagagcagtgaacaaactgatggt
catcaggattcagaatgtgatgtttatccatctgattctgatgttgaatctcaagatggt
gcattacgagaaagtggagatggacaagaagaagagaaacctcaaaagaaattggatgat
gatgaggacagacgtaatccgcaatatattcctaaaagaggaacattttatgaacatgat
gacaggactaccgatgaagtgacggataatactgtagagccacagaatgaaagagaaacc
aaagaaaagaaagtgtggaaagataaagaagatagatgggaccatgatcgatacaatgat
gaggaacaagcaccaaagagccatgaagaattaatagcagtttatggttatgatataaga
aacgaagaaggtccacctagagctagaagaagaagaagatatggtcgtggtccaaataag
tatacacgtaattgggaagatgaagatgcatatggaaaagctggaactaatgtttctaat
aaaaataaaaagtttaatagaagtggtgaagatttccctgctctaggaactaataaaaat
gcttctgcaccacctgtggatgaaccagtaatctcatcagcttggtacagtagtaaaaat
aaatcacaaaataaagtacaaaactttccacccctgcaagctcagagtgatagtccaaaa
acaaaatctagcggtacatctaatactctcacaaacgagaataaagctcctaatgaacct
acaaatcctgcttggaaaaaggacgccaaaaattcatcctatactcaaagtagtaatgga
aacagtggggctggtggtgatgcagataaattagttaacactaaagtatctcccagagat
aacaacaagaggaatgttcaagagtctgtaagcttggcagccagtagaactcgcgggcga
ggattcagaacaaatgctaataacaatatggtcgctaatagaacagttgagacaaagccg
aaaggacgtggagcaggtccaatctctgccgagaataagagaaatagtactattcaaaat
gatgacgaacagcaaattactcatgacatgaaacatgtgaatcttcacgatggtacgcaa
taccatcaaggtggaagacacaacaaaaatttctatggacagtcttccaatcagcaaaga
tcaggcacggtacctccaagaatgcaacagcagtctcattcacagcaacaaccgcaacaa
caacagcagtcgcagcaacaggcaactcaacaacaagatagttctgctaatagaccaaag
cgatattctagtttgcgacaacgtcctacggcttccgaaactccaggacaacaaaattat
acaccaccgcatgggcaacatggacagcataatcaacataatcagcataatcaacatagt
cagcataatcaacataatcaacataaccaacacggtcaacataatcaacatggatatttc
cctcctcaagctggaaattcaagaggtgttttagaatcacaaggatatccacaaggtcat
tttgaacaatctacgcccgttgctgccgctgctgcacccatggctggtcagcctgttatt
cctctgccgcctaatggtcaacctgctagctatgctccaccgccgtttttagtaccgcca
ccacagtttattcctccgcagactgctccgcctagtataattaattatgttccgggtccg
aatggaccagcatttcaaccaaattttcaaggttaccaaggatatagtccaccagtacag
ccatcgcgtccaccgccaccgcaagaactgttccaaccacaaggttgcacttactatagt
cctgcacagcagcaacagcaacaacaacagtcggcaccgatgagacgaccaaaggcagct
attccaattcttccaccaccagaaaatcagcaacatcaaactagtagaggaagaggtaga
agtacgcaaccacaacaaaataatcaagtgggaaatatacagcagactgaactggaaatc
aaaactgacttggaagaaagtgatcagaaaatcgtgtctgaacaatttgataacatccaa
accgagcaaattatagaagttgaagaagcaccgaaaaatgatgatttaagtgtaataacg
gatactatggttgaaaataaagaaaaggatgttccggatgttgatatcgatataccactg
ggctccgaaggtgttacaactgatcaagtagacggaataagtgatcacgattcattaaaa
gttactatagatgatcagaatattattccacttaaatctccggaagcagtcgtggaagag
actgaaaatgattcaaatataattgaaaccactacgtctgaaagtaaggttgttgaagag
gcagcagcttga
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