Osmia lignaria (orchard mason bee): 117601247
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Entry
117601247 CDS
T09775
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
olg
Osmia lignaria (orchard mason bee)
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
olg03041
]
117601247
03016 Transfer RNA biogenesis [BR:
olg03016
]
117601247
Enzymes [BR:
olg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117601247
Spliceosome [BR:
olg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117601247
Transfer RNA biogenesis [BR:
olg03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
117601247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
Cas3-like_C_2
Band_7_1
Motif
Other DBs
NCBI-GeneID:
117601247
NCBI-ProteinID:
XP_034173673
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MAAFEEMGVLPEIANAVDEMEWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPV
IQIVCETLKDIESGKTAKTSSTGHHQPSTHWALSLFDRGRALAVTPDGLRCQSREQKEWH
GCRANKGVHGKEKFFYEAIVTDEGLCRVGWSTAEATLDLGTDKFGFGFGGTGKMSNAKRF
DDYGEPFGMHDVIGCYLDLSNGHIRFTKNGKDLNVAFNLNAQQKSQTYYPAVVLKNAEMS
FNFGAQPFKYPPCGHLKDHIPLASAPKECVKENPNNTSQGQSIEDSKPKPNAPQAIIMEP
SRELAEQTYNQIQKFKKYLTDPTIKDLLVIGGVSVKEQISKLNSGVDIVVGTPGRLEDLI
QGGYLSLTHCRFFILDEADGLLKQGYTELIERLHKQIPKITSDGKRLQMIVCSATLHSFE
VKKMADRLMHFPTWVDLKGEDAVPETVHHVVVMVDPQKDKSWHNLRRHIETDGVHQRDNI
RPGSNDPETLSESVKILKGEYCIRAIKVHNMDRAIIFCRTKIDCDNLERYLKQVGGNQFS
CVCLHGDRKPAERKANLEKFKKQEVKFLICTDVAARGLDITGLPFMINMTLPDEKSNYVH
RIGRVGRAERMGLAISLVSKVPEKVWYHGEWCPSRGRNCNNTNLTDKGGCCTWYNEPNYL
AEIEDHLNITIQQVEPDMKVPMNDFDGKVIYGERRANMGSTYQNHVEQMAPYVAELSSLE
SRAQLLHLERHMAAAAN
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcggcattcgaggaaatgggtgttctaccagaaattgcaaacgcagtggatgaaatg
gagtggacattaccaactgatgtccaagctgaagctattccattaattttgggtggcgga
gatgtattgatggctgcagagactggtagtggaaaaactggtgctttctgtttgccagtt
atacaaattgtatgcgaaactctaaaggatatagaatctggcaaaacagctaaaacaagt
tctacaggacatcatcagccttctacacattgggcattgagtttatttgatagaggaaga
gctttagctgttactccagatggcctgagatgtcagagtcgtgaacaaaaagaatggcat
ggttgcagagcaaacaaaggagtacatgggaaagaaaaatttttctatgaagctatagta
actgatgaaggtttatgccgtgtaggctggtctacagctgaagccacattggatctggga
acagacaagtttggttttggttttggtggtactggtaaaatgtcaaatgcgaaacggttt
gacgattacggagaaccttttggaatgcatgatgtaattggatgttacttagatttatca
aatgggcatattaggtttacaaaaaatggtaaagatcttaatgtagcattcaacttgaat
gcacaacaaaaatcacagacctactatccagctgttgttttaaaaaatgctgaaatgtca
tttaattttggagcacaaccatttaaatatccaccatgtggtcatttaaaagatcacata
cctcttgcttcagctcctaaagaatgtgttaaggaaaatcctaataatactagccaaggt
caaagtatagaggatagcaaaccaaaacctaatgctcctcaagctataattatggaacca
tcgcgggaacttgctgaacaaacatataatcagattcaaaagtttaaaaaatatctaaca
gatcctaccatcaaagatttgttagttattggaggagtaagtgtaaaagaacagatttct
aagctaaattcaggtgtggacatagtggttggaacaccaggacgtttagaagatctgata
caaggaggctatttgtccctaacacattgcagattctttattttggacgaagctgatggt
ctattgaagcaaggttacacggaattaatcgaacgtttgcataaacaaataccaaaaatt
acatcagatggaaaaagactgcaaatgatcgtgtgttcggctacgttgcattcttttgaa
gtgaaaaaaatggcagatcgcctgatgcattttccaacatgggtagacttaaaaggtgaa
gatgctgtacccgaaactgtgcatcacgttgttgtaatggtagatccgcagaaagataaa
tcttggcataacttaagaagacacatagaaactgacggtgtacatcaacgagataatata
agaccaggaagtaacgatcctgagacactatcagaaagtgtgaaaatactaaaaggtgaa
tactgtattcgtgccattaaggtgcacaacatggatagagctatcatcttctgtagaact
aagatagattgcgataatttggaacggtatttgaagcaagttggaggaaaccaattttcg
tgcgtatgtttacacggtgatcgaaagcctgccgaacggaaagctaatttagaaaagttc
aagaaacaagaagtaaagttcttgatctgtaccgatgttgctgctagaggtttagatatt
actgggctaccattcatgattaatatgactctacctgatgagaaatcaaactacgtgcat
cgtatcggtagagttggtagagctgaacgaatgggtttggctatttcattagttagcaaa
gtaccagaaaaagtgtggtaccacggtgagtggtgtcctagccgcggaagaaattgcaac
aacactaatcttaccgacaagggtggttgttgtacctggtacaatgaaccaaattattta
gccgaaattgaagatcacctaaatatcacaattcaacaagttgaaccggatatgaaagtt
cctatgaacgacttcgacgggaaagttatatacggagaaagaagagcaaacatgggttcg
acttatcaaaaccacgttgaacaaatggcaccttacgtggctgagttatcttccttggaa
tcaagagcacaacttttgcatttggaaaggcatatggctgcagcagcaaattaa
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