Osmia lignaria (orchard mason bee): 117601288
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Entry
117601288 CDS
T09775
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg04140
Autophagy - animal
olg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117601288
04148 Efferocytosis
117601288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
olg04131
]
117601288
Membrane trafficking [BR:
olg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117601288
Hops complex
117601288
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
117601288
NCBI-ProteinID:
XP_034173782
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MSAMLTADWFPLGRDVYFRKFELYPLSFQHEVSNNNFLVAAPYGGSIAITRNPKKLVKVQ
GTSKPMIYLYTSSGKLTAKLQWSGGQLVYLGWSQQEELLCIQDDGMVHIYDMFGTYQHAF
TMGNEVKDTKVVEAKFFVSYTGTGIAVLTSTNRIFLVNNVVEPKVRQIEIPRHGGTIDCW
CLVLCDRESRVILSNRDGIFVVHQSYQNAVHVPFDNIFSRHNKIYSVIAMAVSGNNRHIA
LYTDTSHLYIGSVDFKKKYCEHYTNMKEPLENIAWCGTEAVVCSWSSTVMVVGRTAEVIV
YTYDGPVHLVTEIDGVRVLSGSSHEMIQKVPSVVQKIFGINSTDPASYLLEASKQFQKKS
HKADSYIDLVKDKLDVAVKACIDGAGHEFHFETQKLLMRAAKFGKGFSKTVNPDYYVNMC
RTLRVLNAVRHPAIGIPLTYTQFTVLTSQVLLDRLVARRHYYLSIQIARHLQLPEIEGES
RILAHWACYKVKQTQLDKEQIAEEIADKLGYAPGVSYSEIAKRAADCGRKQLAIKLIDYE
PRAHQQVPLLLTLGEERAALSKAVDSGNTDLVYTVILHLRENMTLSDFQMSISRCPLAMA
LYIKYCQNHNRETLRDIYNQYDDFHSQAIWFITESYQRKNTMAREALLQSAQENFKLARN
DTNAALTEEQIKLLRYQRSLEDILHESIVGKPLHDTVQILLSHNELKLADKLRSEYRISD
RRYWWLRIHYLAKENMWSELEKLSKSKKSPIGYEPFVDQCLKYNKEREAKKYLPKVKDEL
KVKYFVKLKMLNEAIQTAVEQKNVSALKFVLAQCNASDRQLIDKINMYITSLEN
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctatgttaactgctgattggtttcctttgggccgagacgtgtactttagaaaa
ttcgaactctatccattatctttccaacatgaggtttcgaataataattttttagtagca
gctccttacggaggttccattgcaattaccaggaatccaaagaaattggttaaagttcaa
ggaaccagtaaacctatgatatatttatatacatcatctggaaaattaacagccaagtta
caatggagcggtggacaattggtttatctaggttggtctcagcaagaagaattgttatgt
atacaagacgatggtatggttcacatatacgatatgtttggcacttatcaacatgccttt
accatgggaaatgaagtgaaagataccaaagttgtagaggcaaagttctttgtcagctac
actggtacaggtatcgcagttttgacctctactaatcgtatattcctagtgaataacgtg
gtggaaccaaaagttagacaaatagaaattcccaggcacggaggcaccatagattgttgg
tgtttagtactttgcgacagggaatctcgtgtaattttatcaaaccgagatggaatattt
gttgtacatcagtcgtatcaaaacgcagtccacgtaccatttgacaatatcttcagcaga
cataataaaatatacagtgtaatagccatggctgtgtctggaaataatcgtcatatcgct
ctttatacggataccagtcatttgtacataggttctgttgattttaagaaaaaatattgc
gagcattatacgaatatgaaagaaccattagaaaatatagcatggtgtggaactgaagct
gtagtatgcagctggagtagtaccgtaatggtggtcggtagaaccgccgaagtaatagtg
tacacttacgacggtccggtacatcttgttacagaaattgacggtgtgcgtgtactgtct
ggttcttctcatgaaatgatacagaaagtaccgagcgttgttcaaaagatatttggtatt
aattcaaccgatcctgcatcttatcttttggaagcttcgaaacaatttcagaagaagagc
cataaagctgacagttacatagatctggttaaagataaattagacgtagcggtaaaagct
tgtatcgatggtgctggtcatgaatttcattttgaaacgcaaaagcttttaatgagagca
gccaaattcggaaaaggctttagcaaaacagtcaatcctgactattatgttaatatgtgt
cgaacgttgagagttttgaatgcggttagacatcctgcgattggaattccattaacgtat
actcaatttactgttttaacgagtcaagtgttgttagataggctcgttgcgaggagacac
tactatttaagcatacaaattgcacgacatcttcagttacctgaaatcgaaggagaaagt
cgaatattagctcattgggcttgttataaagtcaaacaaacacagttggataaggaacaa
atagcagaagaaatagccgataaattaggatacgcgcccggagtttcttacagcgaaatt
gcaaaacgagcagccgattgcggtcgaaaacagctagctatcaaactgatagattatgaa
ccacgtgcacaccaacaggtaccgcttttgttaacgcttggagaagaaagagctgcttta
agcaaagccgttgacagtggaaatactgacttggtttatacagtgatacttcacctcagg
gaaaatatgacgctcagcgacttccagatgtccataagccgttgtcctttagcgatggcc
ttatacattaaatattgtcaaaatcacaatcgggaaacacttcgagatatttataatcag
tacgatgactttcattctcaagcgatatggtttattactgaaagttatcagcgaaagaat
acaatggcaagagaagctttattgcagtctgctcaagaaaatttcaagttagctcgtaac
gataccaacgcggctttgacagaggaacaaataaaattgttacgctatcaaagatcttta
gaagatatattacacgaatcaatcgttggaaaaccgcttcacgatacagtacagatatta
ttgtcacacaatgaattaaaattggcagataaattgagatcggaatatcgaatatcagac
cgaagatattggtggttacgaatacattatttagcaaaagagaatatgtggagtgaacta
gaaaagctttctaaaagcaaaaaatctcccattggttatgagccatttgtagatcaatgt
ttgaaatataacaaagaaagagaggcaaagaaatatttacctaaagtaaaagatgagctg
aaagtgaaatactttgtcaaactaaaaatgctaaacgaagcgattcaaacagcagtagaa
caaaaaaatgtttcagcgttaaaatttgtcctggcacaatgtaatgcatctgatagacag
ttaattgataaaattaacatgtatataacaagtcttgaaaactaa
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