Osmia lignaria (orchard mason bee): 117601857
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Entry
117601857 CDS
T09775
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
olg
Osmia lignaria (orchard mason bee)
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
olg03009
]
117601857
Enzymes [BR:
olg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117601857
Ribosome biogenesis [BR:
olg03009
]
Eukaryotic type
90S particles
Helicases
117601857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
HEM4
AAA_19
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
117601857
NCBI-ProteinID:
XP_034174993
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MDAYELFRKLSTGVKFDKKRFQTDAERFQLLKKQLESIPKNERKSITTFNDINCSMMSMK
RKHDEIEEDRENNDELILLNGISVPKNGNKIKSKKLKISITEEKGLKLKQEKINQFRNQH
RISITGSRIPEPISEFIKLSTCYGVSEQLLNNVINCGYVHPTPIQMQAIPIMLQNRQVLA
CAPTGSGKTAAFLLPIIHCLGGPQKKGFRAVILCPTRELAKQTYRECLRLSEGYNLRIHI
ISKVNQALHKYGPKSSQKFDILITTPRRIIFLLNQDPPAISFKNVEWLIVDEADKLFEDG
TRCFRDQLEIISKACTNEKLCRAMFSATNTPIVTKWCRHNLKGLATVTVGHRNAATDLVE
QELLFVGAERGKLVALRNIIQKGVLPPVLVFVQSKERAQELFNELIYDGINVDVIHADRT
QSQRDNVVRCFREGKIWVLICTELMARGIDFKGVNLVINYDFPPSVISYVHRIGRTGRAG
HRGKAITFFTKQDTTNLRSIAAVMRQSGCNVPDYMLAMKKHSKKEKRKLEHKALVREKIS
TIPKFKRIRNKERMRELGGNASNQKQHE
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggatgcatatgaactttttcgaaagctctctactggtgtaaagtttgacaagaaacgt
tttcaaactgatgcagaaagatttcagctccttaaaaaacagcttgaaagtatacctaag
aatgaaaggaaaagtattacaacattcaatgatataaactgttcaatgatgtccatgaaa
agaaagcatgatgaaattgaagaagatagagaaaacaatgatgaattaatattactaaat
ggaatatctgttcctaagaatggaaataaaattaaatctaagaaacttaaaatatctata
acagaagagaaaggattaaaattaaaacaggaaaagattaatcagttccgaaatcagcat
cgcataagcattacaggtagccgcatacctgaacctatttcagaatttatcaaactatca
acatgttatggtgtgtctgaacaattattaaacaatgttataaattgtggttatgtgcat
ccaacaccgattcagatgcaagctatacctattatgttacagaatagacaggtactagct
tgtgctccaactggatctggaaaaacagctgcatttttgttacccataattcattgctta
ggtgggccacagaagaagggatttagagctgttattttatgtccaacaagagaattggca
aaacaaacatacagagaatgtttgcgtcttagcgaaggttataaccttagaattcatatt
ataagcaaagtaaatcaagcgctacataaatatggtcccaaaagttcacaaaaatttgat
atattaattactacaccaagaagaataatattccttttaaatcaagatccaccagctatt
tctttcaagaatgttgaatggctaattgtggacgaagcagacaaacttttcgaagatgga
acacgatgcttcagagatcagttggaaataatttcaaaagcatgtacgaatgaaaaatta
tgtagggcaatgtttagtgcaaccaatactcctatagtaactaaatggtgtcgccataac
ttgaaaggtcttgcaacagttaccgtcggtcacagaaatgctgcaactgatttagtagaa
caagaacttttattcgttggggcagaaaggggaaaacttgtagcacttcgaaatatcatt
caaaagggagtattaccgcctgttttggtttttgtccaaagtaaagaaagagctcaagaa
ttatttaacgaacttatatacgatggaattaacgttgatgttattcacgccgacagaacg
cagtcccagcgagacaatgttgttcgttgttttagagaaggaaaaatatgggttttaata
tgtacggaattgatggcaagaggcattgattttaaaggtgtaaatcttgttataaattat
gattttccaccatctgtcatttcgtatgttcatagaattggtcgtaccggtagggctgga
catcgagggaaagcaattacatttttcactaaacaagacactacaaatttgagaagtata
gctgctgttatgcgacagtctgggtgtaatgttcctgactatatgttggctatgaaaaaa
catagtaaaaaagagaaacgaaagcttgaacataaagctcttgttagagaaaaaatatct
accataccaaaatttaaacgcatacgtaataaagaaagaatgagagaacttggtggaaac
gcttctaatcaaaagcaacacgaatga
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