Osmia lignaria (orchard mason bee): 117601939
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Entry
117601939 CDS
T09775
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117601939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olg03019
]
117601939
Messenger RNA biogenesis [BR:
olg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117601939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
La
TPR_2
ARM_TT21
SUZ-C
TPR_8
Fibritin_C
TPR_1
Motif
Other DBs
NCBI-GeneID:
117601939
NCBI-ProteinID:
XP_034175203
LinkDB
All DBs
Position
Unknown
AA seq
1257 aa
AA seq
DB search
MAETSEVQNKDIGPVVITEQERELAQNAVFEFQKGAYTSCLSYLNKLETLRPKDLKVMHN
KVIVECYKNDLKKTEVLRKSLNAICGQMSTTDSTETIDDIEKCVMRYNQAVLLFHTKQYN
SALQIMNRLFAFIEPMEESLAHKVCLLLIELHIAIKQPDAALSLINYIESQLISTDNSKI
APVDKEGIMKSMKEQKEQKKEVDTAVDAFKIKLLKCKARIYLMTHQLKLCKREWKTLVSM
GTPANISTVFLKANLEYLRGNYKKAVKLLNSVTSENVEFKTCGESSAVLYYNNMACIHLA
MGKPNLACFYLRKALHENRCAMESVQTKDSDPLCTQPLYTLGGNRHYELMYSLGVSLLHA
GQASVAFDCFMEAAQKLHNNPKLWLRVAECCIYCHKPTNEVDFNIPKRRKDLVQKIVGTG
IYRKIILASSLSKDVKYHSEGFPSAIPQLTLEFASLCLKNALFLLPNNNEVNVPVATIAN
SQTVPLSLTAGHNLGTQHSTLMSQATTIEALNLRISVLAASAYVCLCLGDYVIALEHAKS
LLNINKLPGAYRMLGNLYAAESLIFMDKISEAIEYLKPENIQDLNTFVPFPETQDKDKDK
GDEVISKPIKMWYPTTVLTGIAVLRYNLAVAYAIRGELDKSGETLKQVWMSKGPDCDVPI
HVIMLALYIELQLGWIDLKDKRKRSRFVFFNRQSGSWSYFVNIYTRGKMEEVDVQQESRD
QVGCLIFSPPPMKKSDTRDSISSVDSDVSLSFDRRGSKGEDADLSDCGSTSSERKLNDTT
ENRISSDPDSGADCKEDTVVNDSREQKQEKSIEESKSTQADDFVPPSDELTEKICTQVEF
YFSDENIVKDAFLLKHVKRNKEGYVSLKLISSFKRVKHLSKDWRVVGAALAKSKKLQVNP
QGTKIRRIDPLPPFDQTTPSRTILAARLPVEKLSVESVAEIFRPCGEIALIRVLRPGHPA
PAEVRQAIAKRPELAASEECAMVEFTDSASARAALQMSLGDAKVFELQQSGDKKKKQQPA
KKSALTRLGKEETYNSSSCASGSEPEDGRARHKKPIHTYPTYHPYPGNHYQGPPSPEAWL
SRRLSACSVSGSENGYILRRLSSCSGSGSGSESGSFGRRYSACSSGSDTGYYHPVFPPNY
YYPENRRFSCCSSSGSECNGVCYHSSSRRGSADYGPFIRRLSACSRDSGYDVGVRRLSLC
SSGSEQAGYCRPRSNSGIALTHLPENVTRMPSGPDGTRGFGRPPKMNAMAPPMEPTC
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaacatctgaagtacaaaataaagatattggtcctgtggttatcacagaacaa
gaacgtgaattggctcaaaatgcagtatttgaatttcagaaaggagcatatactagttgc
ttgtcatatttaaataaactagaaacccttaggccaaaagatctcaaagtaatgcacaat
aaagttatagtagaatgctataaaaatgacttgaaaaagacagaggtattaagaaagagt
ttaaatgcaatatgtggacaaatgtctacaacagattcaacagaaactatagatgacatt
gaaaaatgtgttatgagatataatcaagcagttttgctatttcatacaaaacaatataat
tctgcacttcaaattatgaatagattatttgcttttatagaacctatggaagaatcatta
gcacataaagtatgccttcttcttatagagttgcacatagcaataaaacaaccagatgcg
gctttatctttgattaattatatagaaagtcaacttatatctacagataattctaaaatt
gcacctgttgataaagaaggtataatgaaatctatgaaagaacaaaaagaacagaaaaaa
gaagttgatacagctgtggatgcgtttaaaataaaactattaaaatgtaaagctagaata
tatcttatgacacatcagttaaaactatgtaaaagagaatggaaaaccttagtttccatg
ggtacacctgcaaatatatcaactgtttttctaaaagctaatcttgaatatttaagagga
aattacaaaaaagctgtgaaattattaaattctgtaacatccgaaaatgtggagttcaaa
acttgtggagagtcctctgctgttttgtattataacaacatggcatgtatacatcttgct
atgggtaaaccgaatttagcttgcttttatttacgaaaagctttacatgaaaataggtgc
gcaatggagagtgtacaaacgaaagacagcgatcctttatgtacacaaccattgtacaca
cttggtggaaataggcattatgagttgatgtacagtttgggtgtgtcactattacatgca
ggtcaagcttcggttgcttttgattgtttcatggaagctgcacaaaaacttcataataat
cctaaactatggttaagggttgcagaatgctgtatttattgccataaaccaaccaacgaa
gttgatttcaatattccaaaacgaagaaaagatttagtacagaaaattgttggtactgga
atttataggaaaattattttagcttcttccctttccaaagatgtaaaatatcattctgaa
ggtttcccttctgccattccgcaattaactttggaatttgcatcgttatgtctaaaaaat
gcattatttttattaccaaataataatgaagttaatgtaccagtggcaacaattgctaac
tcgcagacagtgccgttatcattaacagctggtcataatttaggtactcaacattcaact
ttaatgtcacaagctacaaccattgaagcattaaatttgagaatcagtgtcttggctgca
agcgcatacgtttgtttatgccttggtgattacgttattgcgcttgaacatgctaaatca
ttgttaaatatcaataaattacctggtgcatatagaatgctgggaaatctatatgcggca
gaaagtttgatatttatggataaaattagtgaagcaattgaatatctaaagccagaaaat
attcaagatttgaatactttcgtaccatttccggaaactcaggataaagataaagacaaa
ggcgatgaagttatctcaaaacccataaagatgtggtacccgacgacagttcttacaggt
atcgctgtattacgatacaacctagctgtagcttatgcaattcgcggtgaactggataaa
tcaggagaaactttaaaacaggtttggatgtccaaaggtccggattgtgatgtacccata
catgtaataatgttggctttatacatagaactacaattaggatggattgatttgaaagat
aaacgcaagagatcgaggttcgtgtttttcaaccgacaatcgggatcttggtcgtatttc
gtgaatatctacactcgtggaaagatggaggaagtggacgttcaacaggagtcaagagac
caagtgggctgtttgatattttctccaccgccgatgaagaaatccgacacgagggacagt
atttcttcggtggacagcgacgtcagtctttcgttcgatcggaggggctccaaaggagag
gatgctgatctatccgactgtggaagtacgagcagcgaaagaaaattgaacgatacgacg
gagaatcggataagttctgatcccgattcgggagcagactgcaaggaggacacggtcgtc
aacgactctagagagcaaaagcaggagaaatcgatcgaagaaagtaagagcactcaggcg
gacgattttgtcccaccgagcgacgagttgaccgagaaaatatgtacccaagtggagttt
tacttttccgatgagaatatcgtcaaagacgcgttcctcttgaaacacgtgaaaaggaac
aaggagggttacgtgtctctgaagctaatctcgagtttcaaaagagtgaaacaccttagc
aaagattggagagtagtgggtgcagctttggcaaaatctaagaaacttcaagtgaatccg
cagggtacaaagatccgtaggatcgatcctctgccacctttcgatcaaaccaccccatcg
cgaacgattctagctgctagacttccggtggagaagttatcggtcgagtctgtggctgaa
atcttcaggccatgcggagagatcgctctcatcagggttcttcgaccaggtcatcctgca
ccagccgaggtaagacaagcgatagctaagaggccagaattggcggcaagcgaggagtgc
gccatggtcgagttcacggattcagcatctgctcgtgctgctttacaaatgtccttgggc
gatgccaaggtgttcgagttgcaacaatctggcgataagaagaagaaacaacaaccagca
aagaaaagtgccctgacaagactgggcaaagaggaaacttataattcatcgagttgcgcc
agtggatctgagcccgaagacggacgagccaggcataagaaaccaattcacacctaccca
acgtatcacccttatccgggaaatcattatcaaggacccccatcaccagaggcatggtta
tcccgccgattgtccgcatgctcggtgtcaggttcagaaaatggttacatcctacgtcgc
ctgtctagttgctcgggttcaggttccggttcagaaagcggaagcttcggtagacgctac
tcagcctgttcctctggttccgacaccggttattaccacccagttttcccaccgaactac
tactatccggaaaatcgacgtttctcctgctgttcgagttccggttccgagtgcaacggt
gtttgctatcattcttctagtcgtcgaggatccgcggattacgggccctttataagaagg
ctatccgcttgcagccgagattccggctacgacgtgggtgttaggagattgtcgttatgt
tcctctggctccgaacaggctggatattgtcgacctagaagtaacagcggtattgcgtta
acgcatttgccggaaaacgtgacgagaatgccatctggtccagatggtacgcgtgggttt
ggtcgaccacctaaaatgaacgccatggcaccacccatggagcccacgtgttag
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