Osmia lignaria (orchard mason bee): 117602072
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Entry
117602072 CDS
T09775
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117602072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olg03019
]
117602072
Messenger RNA biogenesis [BR:
olg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117602072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
HBS1_N
MMR_HSR1
AAA_22
Dynamin_N
Ras
SpoIVA_ATPase
Motif
Other DBs
NCBI-GeneID:
117602072
NCBI-ProteinID:
XP_034175480
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MSRHRDVRCMNYSEEYENYDEVYGHSVEDDYCVSPSAEQFLFDRSKQQNIASFITEPDIL
EDNEDNRESLSPSKEEERVLTELERAKLISCMESIKNIIGDTVPETEIKKKIIQSNFDAE
VALDLVLKESPPKTVIESSTGHKDNLELYSGNKLSSKPTFQVTAPSNVKILHAGKRPAVQ
GFDLSGTENTDILNSRVESPRSRSPYSDHNSPEIKRKERTVPKEKKAVSSNANSPRCQSP
VPGHVTPDFDSKPKLNEEKHDVLKIYKDKRGDSKEHIHLVVVGHVDAGKSTLLGRLLCDL
GQVPSRLIHKYQQESKKIGKQSFAYAWVLDETGEERERGITMDIGHSKFETETKSITLLD
APGHKDFIPNMITGATQADVALLVVDATRGEFETGFDSGGQTREHALLLRSLGVLQLAVV
INKLDTVDWSKERFNEIVEKMNVFLKQAGFKDNVPFVPCSGLSGENIVTKPKEPLSNWYT
GPTLVDVIDNFKCPERPINKPFRFSVNDIFKGTGSGFCVSGHVETGMISLGDKVLILPRN
ETAVIKGLQVDEASTTNAFAGDHVSLTLSGIDQQNVGIGDIICIPQNPVPVTTCFEAHIV
VFAVKIPIMKGLPVVMHQQSLVQPAVVTKLIAQIHRTTGETIKKKPRCLPKNSSAIVEIR
TQNPVCMELYKDVKQLGRITLRVEGTTIAAGLITKIK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcatcgtgatgtgcggtgcatgaattattcagaagaatatgaaaattacgac
gaggtgtatggacattctgtagaagatgactattgtgtatctcctagtgcggaacagttc
ttatttgatcggagtaagcaacaaaatattgcatccttcatcacggaaccagacatacta
gaagacaatgaagataatagggaatctttgtcaccttctaaagaagaagaaagagtgctt
acagaattggaaagagccaaacttatatcgtgtatggaatctatcaagaatattatagga
gatacagttcctgaaactgaaataaagaagaagattattcaatcaaattttgatgcagaa
gtagcacttgatctagttttaaaagaatctcctccaaaaactgttattgaatcatctaca
ggccataaggataatttagaactttattcaggtaacaaattgtcatccaaacctacattt
caagttacggcaccatccaatgtgaaaattctacatgctggaaaacgacctgctgtacaa
ggttttgatttgagtggaacagagaatacggatatactaaattctcgtgttgagagtcct
cgttctcgaagtccatattctgatcataatagcccagaaataaagagaaaagaacgtact
gtaccaaaggagaaaaaggcagtttcttcaaatgcaaacagtccccgatgtcagtcacca
gtaccaggacatgtaacacccgactttgattctaagccaaaacttaatgaagaaaaacat
gatgttttaaaaatatataaagataaaagaggagatagcaaagaacacatacatttagtt
gtagttggtcatgtggatgctggtaaaagcactctattaggtcgacttttgtgtgattta
ggacaagttccctcaagactaattcacaaatatcagcaagaaagtaaaaagataggaaaa
cagtcatttgcttatgcatgggtccttgacgaaacaggagaagaacgagaacgtggaata
actatggatattggtcactctaaatttgaaacagagacaaaatctatcactttattagat
gcacctggacataaagacttcattcctaatatgattactggtgctactcaagcagacgtg
gctttattagttgtagatgcgactaggggagaatttgaaactggttttgatagtggaggt
caaactagagaacatgcactattattacgttctttaggtgtattacaattagcagtggta
ataaataaattagatactgttgattggtcaaaagaaagatttaacgaaatagtggagaaa
atgaatgtatttttaaaacaagctggattcaaagataacgtcccttttgttccctgtagt
ggtctatctggcgaaaatatagtaaccaaacctaaagaacctttatctaactggtataca
ggacctactttagttgatgttatagataattttaaatgtcccgaacgccctataaacaaa
cctttccgtttctcggtcaatgatatatttaaaggtacaggatctggattttgtgtttct
ggacatgtggaaacaggtatgatatctttgggtgacaaagttttaatacttccacggaat
gaaactgctgtgattaaaggtttgcaggtggatgaagcatctacaacaaacgcatttgct
ggagatcatgtttcgttaacgttatcaggaatcgaccaacaaaatgttggaattggtgat
atcatttgtatcccacaaaatccagttcctgtaactacatgtttcgaagcgcatatagtt
gtatttgcagttaaaataccaattatgaaaggtcttccagtagtgatgcaccaacaatct
ctagtacaaccagctgtagttacgaaattaatagcccaaattcaccgaactaccggtgag
accataaaaaagaaaccgcgttgtttaccaaaaaattctagcgctattgttgaaattaga
acacaaaatccagtttgtatggaattatataaagatgttaaacagttaggtcgaattacg
ctacgcgtggaagggacaactattgcagctggactgattacaaaaatcaagtag
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