Osmia lignaria (orchard mason bee): 117602183
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Entry
117602183 CDS
T09775
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
olg
Osmia lignaria (orchard mason bee)
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
olg03021
]
117602183
03036 Chromosome and associated proteins [BR:
olg03036
]
117602183
Transcription machinery [BR:
olg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
117602183
Chromosome and associated proteins [BR:
olg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
117602183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
HHH_3
HHH_9
Spt6_S1
Tex_central_region
S1_RRP5
Tex_YqgF
OB_RRP5_4th
Tex_N
m_DGTX_Dc1a_b_c
Motif
Other DBs
NCBI-GeneID:
117602183
NCBI-ProteinID:
XP_034175743
LinkDB
All DBs
Position
Unknown
AA seq
1743 aa
AA seq
DB search
MADYLDNEAEESEEEEELDLNERKKLKKLKAMHDSDDDEDDDEDEGEVPGLIDDNPIDDN
DGEDSDGSERSGKRKKSDDEFDDRLEDEDYDLLEENLGVKVERKRRFKRLRRIQDEESEE
EEEREAGDERDAIANELFTGSGEEDEARSEVSHRGEVEAYDEEESEDEDDFIVDGDGVPI
TEKRKKKKPIFSDAALQEAQDIFGIDFDYDEFEKYGEDEFEEEEEEEDDDIDYLHDEAED
RPRRSKKLYKKKSTRKSIFEVYEPSELIRGHFTDVDNEIRTTDIPERMQLRTVPITPTAE
GSDELDLEAEWIYKQAFCQPTISIQDAHLNEEAKERAKKGPQTVGKIKKSLEFMRNQNFE
VPFISFYRKEYVLPELNINDLWKIYKFDAKWCQLKQRKENLLKLFEKMRNYQLDELMKNP
DAPLPENLRLIKDDDIERLKNAQTFEELNDTYRHFMLYYSQDVSAMQESLRKKEKENRKK
AKIEKRRQQIAEAEENGEDPPEEIVGDDDEEEEGDDSLKQPVRKGPYFICKKAGLDSLAK
KFGLPPEHFAENLRDNYQRHEVDQEPIEPAVIANEFCSAIFKTSDEVLNAVQLMVAIQLA
HEPLVRKCVREMYMERAKISIRPTKTGMKEIDEGHVLYGLKYLKDKPVRDLVGDQFLKLI
IAEQDKLITISFSDTIEGNTTNNYIDEIKQLYYRDEFSKSVQDWNALRTGSVEIALNRIV
IPQLKKELRNNLLMESKECVMKACCRKMYNWIKIAPYTCEFPDEEDEDWNTSKGLRVMGL
AYVPDPSQSAFTCMVSPDGECTDHLRLPHLMKRKNSPRENEKMMKEADLLAIRNFIATKK
PHVVVIGGESREALMISADIKECIANLSEEEQFPTIQVEIYDNELSKVYANSNRGVSEFR
DYPDLLRQAISLARRMQDPLLEFSQLCSIDEEIMCLKYHPLQDQLPKEDLIENLNLEFIN
RINEVGVDLNRAVLHPYTANLVQFVCGLGPRKAQALIKILKQTNQRLENRTQLITACHMG
PKVFVNCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDDEDANPA
GALEEILESPERLKDLDLDAFAEELERQGFGNKCITLYDIRAELNSRYKDLRIPYQSPNA
EKLFDVLTKETPETFYVGKLIMAAVIGISHRKPQGDQLDQANPVRNDETGLWQCPFCLKN
DFPELSEVWNHFDAGGCPGKATGVRLRLDNGISGYIHVKNLSDKHVANPEERVRVGQVIH
CRVIKIEVERFSVECTSKSSDLLDKNHEWRPQKDVYYDTEAEEKDIKVEEDAKKAQQRQT
YVKRVIIHPSFHNISFAEVEKLMQTVKQGEAIIRPSSKGSDHLTVTWKVTDNIYQHIDIR
EEGKENTFSLGRSLWIGSEEFEDLDEIIARHINPMSAYVSELLDFKYYKPNVEGIKDKAE
EILKEQKKQNPGGIPYIVSASKNYPGKFMLSYLPRTRCRHEYVTITSDGFRFRGQMFSRV
NDLFRWFKEHFRDPIPGQSTPGTPHGAMTSRTPYNGTPGVNGVNSDTIQRVAQSLPHHML
HSLSKVANQTPHHYPPYTPGAASVNNYGMYGSTPYTPSGQTPFMTPYHTPHHTPHHPQTP
SHSQGPFLQPIPPAMNPNSHRTARSHRSVPSASDATNWSKAAEAWARSKQTTSKEFNTTP
RYDESRKTPRNQEAPNERATPRNRTPSARTPSYKSPRGTPFTNSSPRSMSLGDGTPLYDE
SWQ
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttggacaacgaagcagaggagagtgaggaagaggaggaactcgatctt
aacgaaaggaaaaaacttaaaaaattgaaagctatgcacgacagtgacgacgatgaagat
gatgatgaagatgagggagaagtcccagggcttattgatgataatccaattgatgataac
gatggtgaagacagcgatggatcagaaagatctggaaagcgtaaaaaaagtgatgatgaa
tttgatgatcgtttggaagatgaagactatgatctgcttgaagaaaatttaggagttaaa
gttgaaaggaaacgtcgatttaaacgtttacgtagaatacaggatgaagaatcagaggaa
gaagaagaaagagaggcaggtgatgaaagggatgctattgctaatgaactattcacaggc
tctggagaagaagatgaggcaagaagtgaagttagtcatagaggagaagttgaagcatat
gatgaagaagagagtgaagatgaagatgatttcattgtggatggtgatggtgtacctata
actgaaaaaaggaaaaagaagaaacctattttttcggacgccgctttacaagaagcccaa
gatatctttggtattgattttgattatgatgagtttgaaaagtatggagaagatgaattt
gaagaagaagaagaagaagaagatgatgacattgattatcttcatgacgaggccgaagat
cgcccaagacgatcgaaaaagctttataagaagaaaagtacaaggaaaagcattttcgaa
gtatatgaacctagtgaacttatacgtggacattttacggatgtggataatgagatccgt
actacagacattcctgaacgtatgcaacttcgtaccgttccgatcacaccaacagcggaa
ggttccgacgaattagacctcgaggcagaatggatatacaaacaggcattctgtcagccc
acaatttcaatacaagacgctcatttaaatgaagaagccaaagaaagagctaaaaagggt
ccacaaactgttggaaaaattaagaaatctttggaattcatgcgtaatcaaaactttgaa
gttcctttcatctcgttttatagaaaagaatatgttctgccagaattaaatatcaacgat
ttgtggaaaatttataaattcgacgcaaaatggtgtcagctgaaacagaggaaagaaaat
ttgttgaaattgtttgaaaaaatgagaaactatcagttggatgaacttatgaaaaatccc
gatgctccgttgcctgaaaatcttcggcttattaaagacgatgatatcgaacgtcttaaa
aatgcccaaacttttgaagaattgaatgatacttatcgacattttatgctttactatagt
caagacgtatcagcgatgcaagagagtttgcgtaaaaaggagaaagagaatcgaaagaaa
gctaaaatagaaaaaagaaggcaacaaattgcagaagctgaagaaaatggagaagatccc
ccagaagaaattgttggagatgatgatgaagaagaagagggagatgattcattgaaacaa
ccagttaggaaaggtccttactttatctgtaagaaggctggtttagatagtcttgctaaa
aagttcggtctccctccagaacatttcgccgaaaatcttagagataattatcaacgacac
gaagtagaccaggagccgatagaacctgcagtaatagcaaatgaattttgctcagcaatt
tttaagacaagcgatgaagtactcaatgctgtgcaattaatggtcgcgattcaattagcg
cacgaaccattggtgcgtaaatgtgttagagaaatgtatatggaaagagcaaagatctcc
ataaggccaactaaaacaggaatgaaagagatcgacgaaggtcatgtactttatggatta
aagtatcttaaagataagcctgtacgagatcttgttggtgatcaatttttaaaactaatt
atagcggaacaggataaattaattaccatttcctttagcgacacgatagaagggaatact
actaataactacattgatgaaataaaacaattatattacagagatgaatttagtaaaagc
gttcaagattggaacgcattacgaactggcagcgttgaaatagctttaaatcgtattgtt
ataccgcaattaaaaaaggaattacgaaataatcttttgatggaatcaaaggaatgcgtt
atgaaggcttgttgtcgtaaaatgtataattggataaaaattgctccatatacttgcgaa
ttccccgatgaagaagacgaggattggaataccagtaaaggtctccgcgtgatgggtttg
gcttatgtacctgatccatctcagtctgcttttacctgcatggtttctccggacggtgaa
tgtacagatcatctaagactaccacatttaatgaaacgcaagaacagtcctagggagaat
gagaaaatgatgaaggaagctgatttattagcaattagaaattttattgccacaaagaaa
ccacatgttgtggtaattggtggtgaatctagagaagcattaatgatatctgctgatata
aaagaatgtattgctaacctatcagaagaggaacaattccctactattcaagtagaaata
tatgataacgagctttctaaagtttatgcaaatagcaacagaggagtctctgaattcaga
gattacccagacctattgaggcaagctatatctttagcaagaagaatgcaagatcctctg
ttagaattttcacaattgtgtagcatagatgaagaaattatgtgccttaaatatcatcct
ttacaggatcaacttcctaaagaggatcttatagaaaatttaaatttagaatttataaat
cgtataaacgaagttggggtagacttgaatagagcggtactacatccttacacagcaaat
ctggtacaatttgtatgcggtttgggtcccaggaaagcgcaagctttaattaaaatccta
aaacaaaccaatcagaggctagaaaatagaacgcagcttataacagcgtgtcatatggga
cctaaagtatttgttaattgtgctggatttattaagatagatacgaatagtttaggagac
agcaccgaagcatatgtagaagtattagatgggtctcgggtgcatccagaaacctacgaa
tgggcgagaaagatggctgtagatgctttagaatatgacgacgaggatgcaaatcctgct
ggtgctctagaagaaattcttgaatcaccagagagattgaaagatttagatctggacgcg
tttgctgaagagcttgaaaggcagggttttggaaataaatgtattactctttatgatata
agagctgaactgaattctagatataaagatctgcgtataccttaccaatctccgaatgct
gaaaaattgtttgacgttctgacaaaagaaactccagaaacgttttatgttggcaaatta
atcatggcagcagttattggaataagtcatagaaaaccacaaggagatcaattggatcaa
gcgaatcctgttaggaacgatgagactggtttatggcagtgtccattctgcttgaaaaac
gacttccctgaattatccgaagtatggaatcattttgatgctggtggatgtccaggaaaa
gcaacaggagttcgtctaagattggataatggaatatctggctacattcatgtaaaaaat
ttgtccgacaaacatgttgctaatccagaagaaagagtacgagttggtcaagtaattcat
tgtcgcgtaataaagatagaagtagaacggttcagcgtcgaatgtaccagtaaatcaagt
gaccttcttgataaaaaccacgaatggaggccacaaaaggatgtttattatgacacagag
gcagaagagaaagatataaaggtcgaagaggatgctaaaaaagcgcagcagaggcaaacc
tatgtaaaacgtgttataattcaccccagtttccataacataagtttcgcggaagttgaa
aaattaatgcaaaccgtgaaacaaggagaggcgataatacgtccaagcagtaaaggatct
gatcatttgacagtgacatggaaagttactgataatatctatcaacacattgatataaga
gaggaagggaaggagaacacgttctccttgggtcgcagtttatggattggcagcgaagaa
ttcgaagatttagatgaaattatcgcaagacacattaacccaatgtctgcgtatgtttcg
gaactattagacttcaagtattataaaccaaatgttgagggtattaaagataaagcagaa
gaaattttgaaagaacagaagaaacaaaatcctggtggaataccatatattgtgtctgct
tctaagaattatcctggaaagtttatgctttcatatttaccacgaactcgttgccgtcac
gagtatgtaactataacatcggatggatttcgatttaggggtcagatgtttagtagagta
aatgatttgttccgttggttcaaggaacatttcagagatcctatacctggacagagtaca
cctggtactccacatggagctatgacttctagaacgccatacaatggtactccaggagtc
aatggagtgaattcggatacgatacaaagggtggcacagagtctgccacatcatatgcta
cattccctttctaaagtagctaatcaaacaccacatcattatccgccgtatactccagga
gctgccagcgtgaataattatggaatgtatggaagtaccccttatacaccttcaggtcaa
actccatttatgactccgtaccatactccgcatcatacacctcaccatccacaaacacct
agccattctcaagggccgttcttacaaccaatccctcctgccatgaatccaaattcacac
agaaccgcgagatcacatagatccgtcccttctgcgagtgatgcaacgaattggtcaaaa
gcagcagaagcctgggctcgttcaaaacagactacttccaaggaatttaatactactcca
agatatgacgaatctagaaaaacacctcgaaatcaagaagcccctaatgagagagcgact
ccgcgtaatagaaccccttccgcacgtacgccgtcgtataaatctcctagaggaacacca
ttcacaaattctagtcctcgcagtatgtctctcggagatggtactcctttgtatgatgaa
agttggcaataa
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integrated database retrieval system
